RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 MRPS18CQ9Y3D5 142 aaKnown RBP11.63□□□□□ -0.55
DDX56-206ENST00000446987 A0A0B4J2A0 478 aa11.62□□□□□ -0.55
DDX56-206ENST00000446987 SMCO3A2RU48 225 aa11.62□□□□□ -0.55
DDX56-206ENST00000446987 B4GALT2O60909 372 aa11.62□□□□□ -0.55
DDX56-206ENST00000446987 HLA-AP01891 365 aaKnown RBP11.62□□□□□ -0.55
DDX56-206ENST00000446987 CD3DP04234 171 aa11.62□□□□□ -0.55
DDX56-206ENST00000446987 ZGLP1P0C6A0 271 aa11.62□□□□□ -0.55
DDX56-206ENST00000446987 ZNF25P17030 456 aaPredicted RBP11.62□□□□□ -0.55
DDX56-206ENST00000446987 ADH6P28332 368 aa11.62□□□□□ -0.55
DDX56-206ENST00000446987 AKR1C3P42330 323 aa11.62□□□□□ -0.55
DDX56-206ENST00000446987 RPS23P62266 143 aaKnown RBP11.62□□□□□ -0.55
DDX56-206ENST00000446987 RPS15P62841 145 aaKnown RBP11.62□□□□□ -0.55
DDX56-206ENST00000446987 ATXN7L3Q14CW9 347 aaPredicted RBP11.62□□□□□ -0.55
DDX56-206ENST00000446987 UBE2V2Q15819 145 aa11.62□□□□□ -0.55
DDX56-206ENST00000446987 LRRC37A5PQ49AS3 106 aa11.62□□□□□ -0.55
DDX56-206ENST00000446987 OR2A2Q6IF42 318 aa11.62□□□□□ -0.55
DDX56-206ENST00000446987 ABHD17CQ6PCB6 329 aa11.62□□□□□ -0.55
DDX56-206ENST00000446987 SHISA6Q6ZSJ9 500 aa11.62□□□□□ -0.55
DDX56-206ENST00000446987 ZNF227Q86WZ6 799 aa11.62□□□□□ -0.55
DDX56-206ENST00000446987 OR2Y1Q8NGV0 311 aa11.62□□□□□ -0.55
DDX56-206ENST00000446987 OR4K15Q8NH41 348 aa11.62□□□□□ -0.55
DDX56-206ENST00000446987 STT3BQ8TCJ2 826 aa11.62□□□□□ -0.55
DDX56-206ENST00000446987 ROBO4Q8WZ75 1007 aa11.62□□□□□ -0.55
DDX56-206ENST00000446987 ZNF775Q96BV0 537 aaPredicted RBP11.62□□□□□ -0.55
DDX56-206ENST00000446987 POM121Q96HA1 1249 aa11.62□□□□□ -0.55
DDX56-206ENST00000446987 WDR54Q9H977 334 aa11.62□□□□□ -0.55
DDX56-206ENST00000446987 AHSPQ9NZD4 102 aa11.62□□□□□ -0.55
DDX56-206ENST00000446987 SHPKQ9UHJ6 478 aa11.62□□□□□ -0.55
DDX56-206ENST00000446987 SLC13A4Q9UKG4 626 aa11.62□□□□□ -0.55
DDX56-206ENST00000446987 CSAG2Q9Y5P2 127 aa11.62□□□□□ -0.55
DDX56-206ENST00000446987 A0A1W2PPK0 400 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 ZNF891A8MT65 544 aaPredicted RBP11.61□□□□□ -0.55
DDX56-206ENST00000446987 RTCAO00442 366 aaKnown RBP11.61□□□□□ -0.55
DDX56-206ENST00000446987 ERI3O43414 337 aaKnown RBP11.61□□□□□ -0.55
DDX56-206ENST00000446987 HIST1H2BKO60814 126 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 TGFB1P01137 390 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 F13BP05160 661 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 HIST1H2BJP06899 126 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 PTHLHP12272 177 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 HIST1H2BOP23527 126 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 HIST1H2BBP33778 126 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 SNCAP37840 140 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 CD200P41217 278 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 BUD31P41223 144 aaPredicted RBP11.61□□□□□ -0.55
DDX56-206ENST00000446987 ZNF84P51523 738 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 CCR4P51679 360 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 HIST1H2BDP58876 126 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 HIST1H2BCP62807 126 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 MRPS11P82912 194 aaKnown RBP11.61□□□□□ -0.55
DDX56-206ENST00000446987 CLINT1Q14677 625 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 MEF2DQ14814 521 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 HIST2H2BEQ16778 126 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.61□□□□□ -0.55
DDX56-206ENST00000446987 ZNF585AQ6P3V2 769 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 PRSS54Q6PEW0 395 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 STAC2Q6ZMT1 411 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 NRMQ8IXM6 262 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 OR5AK2Q8NH90 309 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 HIST1H2BHQ93079 126 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 HIST1H2BNQ99877 126 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 HIST1H2BMQ99879 126 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 SCRT1Q9BWW7 348 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 SUCNR1Q9BXA5 334 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 PRDM7Q9NQW5 492 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 LANCL2Q9NS86 450 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 STEAP1Q9UHE8 339 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 ICAM5Q9UMF0 924 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 PTRH2Q9Y3E5 179 aaKnown RBP11.61□□□□□ -0.55
DDX56-206ENST00000446987 FBXO7Q9Y3I1 522 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 BOD1L1Q8NFC6 3051 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 RIIAD1A6NNX1 92 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 PLPP1O14494 284 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 ITGB1BP1O14713 200 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 CTAG2O75638 210 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 GCGP01275 180 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 GAPDHP04406 335 aaKnown RBP11.61□□□□□ -0.55
DDX56-206ENST00000446987 KLK1P06870 262 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 SOD3P08294 240 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 ZNF735P0CB33 412 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 EDNRAP25101 427 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 GNG10P50151 68 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 TDGF1P3P51864 188 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 STXBP1P61764 594 aaKnown RBP11.61□□□□□ -0.55
DDX56-206ENST00000446987 DLK1P80370 383 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 RUNX2Q13950 521 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 KHDRBS2Q5VWX1 349 aaKnown RBP11.61□□□□□ -0.55
DDX56-206ENST00000446987 PCSK4Q6UW60 755 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 TMEM64Q6YI46 380 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 PPP1R32Q7Z5V6 425 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 TMED4Q7Z7H5 227 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 C9orf40Q8IXQ3 194 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 OR13C3Q8NGS6 347 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 THRSPQ92748 146 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 COL26A1Q96A83 441 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 NTNG2Q96CW9 530 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 RRNAD1Q96FB5 475 aaKnown RBP11.61□□□□□ -0.55
DDX56-206ENST00000446987 SEC22AQ96IW7 307 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 PACRGQ96M98 296 aaPredicted RBP11.61□□□□□ -0.55
DDX56-206ENST00000446987 PRRT1Q99946 306 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 TMEM208Q9BTX3 173 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms