RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 PARPBPQ9NWS1 579 aa15.22■□□□□ 0.03
SMC6-206ENST00000446852 TNRC6AQ8NDV7 1962 aaKnown RBP15.22■□□□□ 0.03
SMC6-206ENST00000446852 AKAP13Q12802 2813 aa15.22■□□□□ 0.03
SMC6-206ENST00000446852 SSNA1O43805 119 aa15.22■□□□□ 0.03
SMC6-206ENST00000446852 CDC14BO60729 498 aa15.22■□□□□ 0.03
SMC6-206ENST00000446852 MTRF1O75570 445 aaKnown RBP15.22■□□□□ 0.03
SMC6-206ENST00000446852 MPIG6BO95866 241 aa15.22■□□□□ 0.03
SMC6-206ENST00000446852 LCATP04180 440 aa15.22■□□□□ 0.03
SMC6-206ENST00000446852 MECP2P51608 486 aaKnown RBP15.22■□□□□ 0.03
SMC6-206ENST00000446852 TAS2R19P59542 299 aa15.22■□□□□ 0.03
SMC6-206ENST00000446852 PMP22Q01453 160 aa15.22■□□□□ 0.03
SMC6-206ENST00000446852 CDNFQ49AH0 187 aa15.22■□□□□ 0.03
SMC6-206ENST00000446852 C1QL2Q7Z5L3 287 aa15.22■□□□□ 0.03
SMC6-206ENST00000446852 TMEM229BQ8NBD8 167 aa15.22■□□□□ 0.03
SMC6-206ENST00000446852 FDCSPQ8NFU4 85 aa15.22■□□□□ 0.03
SMC6-206ENST00000446852 GINS4Q9BRT9 223 aa15.22■□□□□ 0.03
SMC6-206ENST00000446852 BANF2Q9H503 90 aa15.22■□□□□ 0.03
SMC6-206ENST00000446852 SPRR3Q9UBC9 169 aa15.22■□□□□ 0.03
SMC6-206ENST00000446852 ZNF222Q9UK12 451 aa15.22■□□□□ 0.03
SMC6-206ENST00000446852 MED12LQ86YW9 2145 aa15.21■□□□□ 0.03
SMC6-206ENST00000446852 LAMA5O15230 3695 aa15.21■□□□□ 0.03
SMC6-206ENST00000446852 ZNF724A8MTY0 619 aa15.21■□□□□ 0.03
SMC6-206ENST00000446852 GNB3P16520 340 aa15.21■□□□□ 0.03
SMC6-206ENST00000446852 HOXD11P31277 338 aaPredicted RBP15.21■□□□□ 0.03
SMC6-206ENST00000446852 CCL11P51671 97 aa15.21■□□□□ 0.03
SMC6-206ENST00000446852 ZP1P60852 638 aa15.21■□□□□ 0.03
SMC6-206ENST00000446852 TNK1Q13470 666 aa15.21■□□□□ 0.03
SMC6-206ENST00000446852 CDK10Q15131 360 aa15.21■□□□□ 0.03
SMC6-206ENST00000446852 NRN1LQ496H8 165 aa15.21■□□□□ 0.03
SMC6-206ENST00000446852 GLDNQ6ZMI3 551 aaPredicted RBP15.21■□□□□ 0.03
SMC6-206ENST00000446852 FJX1Q86VR8 437 aa15.21■□□□□ 0.03
SMC6-206ENST00000446852 TMEM178AQ8NBL3 297 aa15.21■□□□□ 0.03
SMC6-206ENST00000446852 OR10R2Q8NGX6 335 aa15.21■□□□□ 0.03
SMC6-206ENST00000446852 NUDCD2Q8WVJ2 157 aa15.21■□□□□ 0.03
SMC6-206ENST00000446852 CYYR1Q96J86 154 aa15.21■□□□□ 0.03
SMC6-206ENST00000446852 GVINP1Q7Z2Y8 2422 aa15.21■□□□□ 0.03
SMC6-206ENST00000446852 M0QYG6 137 aa15.21■□□□□ 0.02
SMC6-206ENST00000446852 FABP7O15540 132 aa15.21■□□□□ 0.02
SMC6-206ENST00000446852 FARS2O95363 451 aaKnown RBP15.21■□□□□ 0.02
SMC6-206ENST00000446852 ERP29P30040 261 aaKnown RBP15.21■□□□□ 0.02
SMC6-206ENST00000446852 Q5BKY6 102 aa15.21■□□□□ 0.02
SMC6-206ENST00000446852 PABPC1L2AQ5JQF8 200 aa15.21■□□□□ 0.02
SMC6-206ENST00000446852 METTL11BQ5VVY1 283 aa15.21■□□□□ 0.02
SMC6-206ENST00000446852 IGF2-ASQ6U949 168 aa15.21■□□□□ 0.02
SMC6-206ENST00000446852 NCCRP1Q6ZVX7 275 aaPredicted RBP15.21■□□□□ 0.02
SMC6-206ENST00000446852 KCNG3Q8TAE7 436 aa15.21■□□□□ 0.02
SMC6-206ENST00000446852 PIGTQ969N2 578 aa15.21■□□□□ 0.02
SMC6-206ENST00000446852 C10orf35Q96D05 121 aa15.21■□□□□ 0.02
SMC6-206ENST00000446852 SELENOIQ9C0D9 397 aa15.21■□□□□ 0.02
SMC6-206ENST00000446852 TINAGL1Q9GZM7 467 aaPredicted RBP15.21■□□□□ 0.02
SMC6-206ENST00000446852 LDAHQ9H6V9 325 aa15.21■□□□□ 0.02
SMC6-206ENST00000446852 ZDHHC11Q9H8X9 412 aa15.21■□□□□ 0.02
SMC6-206ENST00000446852 RNF122Q9H9V4 155 aa15.21■□□□□ 0.02
SMC6-206ENST00000446852 RPL36A-HNRNPH2H7BZ11 118 aa15.2■□□□□ 0.02
SMC6-206ENST00000446852 ALX3O95076 343 aa15.2■□□□□ 0.02
SMC6-206ENST00000446852 CYB5AP00167 134 aa15.2■□□□□ 0.02
SMC6-206ENST00000446852 MELTFP08582 738 aa15.2■□□□□ 0.02
SMC6-206ENST00000446852 RCVRNP35243 200 aa15.2■□□□□ 0.02
SMC6-206ENST00000446852 SLC22A6Q4U2R8 563 aa15.2■□□□□ 0.02
SMC6-206ENST00000446852 SEZ6L2Q6UXD5 910 aa15.2■□□□□ 0.02
SMC6-206ENST00000446852 CPEB3Q8NE35 698 aaKnown RBP15.2■□□□□ 0.02
SMC6-206ENST00000446852 CCDC54Q8NEL0 328 aa15.2■□□□□ 0.02
SMC6-206ENST00000446852 SEMA6DQ8NFY4 1073 aa15.2■□□□□ 0.02
SMC6-206ENST00000446852 OR4S1Q8NGB4 309 aa15.2■□□□□ 0.02
SMC6-206ENST00000446852 TMEM59Q9BXS4 323 aa15.2■□□□□ 0.02
SMC6-206ENST00000446852 CEP250Q9BV73 2442 aa15.2■□□□□ 0.02
SMC6-206ENST00000446852 A0A096LPE4 126 aa15.2■□□□□ 0.02
SMC6-206ENST00000446852 TRGV5A0A0B4J1U4 118 aa15.2■□□□□ 0.02
SMC6-206ENST00000446852 A0A1W2PPZ6 126 aa15.2■□□□□ 0.02
SMC6-206ENST00000446852 ZNF587BE7ETH6 402 aa15.2■□□□□ 0.02
SMC6-206ENST00000446852 RAB3DO95716 219 aa15.2■□□□□ 0.02
SMC6-206ENST00000446852 VSIG10L2P0DP72 767 aa15.2■□□□□ 0.02
SMC6-206ENST00000446852 ANXA3P12429 323 aa15.2■□□□□ 0.02
SMC6-206ENST00000446852 PTGFRP43088 359 aa15.2■□□□□ 0.02
SMC6-206ENST00000446852 NUFIP2Q7Z417 695 aaKnown RBP15.2■□□□□ 0.02
SMC6-206ENST00000446852 TRAPPC6BQ86SZ2 158 aa15.2■□□□□ 0.02
SMC6-206ENST00000446852 GVQW1Q8N7I0 195 aa15.2■□□□□ 0.02
SMC6-206ENST00000446852 WDYHV1Q96HA8 205 aa15.2■□□□□ 0.02
SMC6-206ENST00000446852 NUDT16L1Q9BRJ7 211 aaKnown RBP15.2■□□□□ 0.02
SMC6-206ENST00000446852 TRAF4Q9BUZ4 470 aaPredicted RBP15.2■□□□□ 0.02
SMC6-206ENST00000446852 NPDC1Q9NQX5 325 aaPredicted RBP15.2■□□□□ 0.02
SMC6-206ENST00000446852 DHRS7CA6NNS2 312 aa15.19■□□□□ 0.02
SMC6-206ENST00000446852 SOCS1O15524 211 aa15.19■□□□□ 0.02
SMC6-206ENST00000446852 CRTAPO75718 401 aaPredicted RBP15.19■□□□□ 0.02
SMC6-206ENST00000446852 SCGNO76038 276 aa15.19■□□□□ 0.02
SMC6-206ENST00000446852 NAT2P11245 290 aa15.19■□□□□ 0.02
SMC6-206ENST00000446852 FCGR2AP12318 317 aa15.19■□□□□ 0.02
SMC6-206ENST00000446852 GSK3AP49840 483 aa15.19■□□□□ 0.02
SMC6-206ENST00000446852 RNPS1Q15287 305 aaKnown RBP15.19■□□□□ 0.02
SMC6-206ENST00000446852 PLAC9Q5JTB6 97 aa15.19■□□□□ 0.02
SMC6-206ENST00000446852 PNLDC1Q8NA58 520 aaKnown RBP15.19■□□□□ 0.02
SMC6-206ENST00000446852 APH1AQ96BI3 265 aa15.19■□□□□ 0.02
SMC6-206ENST00000446852 GPR173Q9NS66 373 aa15.19■□□□□ 0.02
SMC6-206ENST00000446852 B3GNT2Q9NY97 397 aa15.19■□□□□ 0.02
SMC6-206ENST00000446852 MEIKINA0A087WXM9 373 aa15.19■□□□□ 0.02
SMC6-206ENST00000446852 ZNF503-AS2A6NEH8 195 aa15.19■□□□□ 0.02
SMC6-206ENST00000446852 ZNF736B4DX44 427 aaPredicted RBP15.19■□□□□ 0.02
SMC6-206ENST00000446852 RGS13O14921 159 aa15.19■□□□□ 0.02
SMC6-206ENST00000446852 CD74P04233 296 aa15.19■□□□□ 0.02
SMC6-206ENST00000446852 UBBP0CG47 229 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms