RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 TIMM8AO60220 97 aaPredicted RBP16.81■□□□□ 0.28
SHANK3-203ENST00000445220 OR7C2O60412 319 aa16.81■□□□□ 0.28
SHANK3-203ENST00000445220 SFT2D2O95562 160 aa16.81■□□□□ 0.28
SHANK3-203ENST00000445220 GUSBP08236 651 aa16.81■□□□□ 0.28
SHANK3-203ENST00000445220 ZNF17P17021 662 aa16.81■□□□□ 0.28
SHANK3-203ENST00000445220 CSNK1EP49674 416 aaKnown RBP16.81■□□□□ 0.28
SHANK3-203ENST00000445220 SEZ6L2Q6UXD5 910 aa16.81■□□□□ 0.28
SHANK3-203ENST00000445220 GOT1L1Q8NHS2 421 aaPredicted RBP16.81■□□□□ 0.28
SHANK3-203ENST00000445220 APH1AQ96BI3 265 aa16.81■□□□□ 0.28
SHANK3-203ENST00000445220 TRBV5-4A0A0C4DH59 114 aa16.8■□□□□ 0.28
SHANK3-203ENST00000445220 C9orf170A2RU37 121 aa16.8■□□□□ 0.28
SHANK3-203ENST00000445220 AGERQ15109 404 aa16.8■□□□□ 0.28
SHANK3-203ENST00000445220 LGALSLQ3ZCW2 172 aaPredicted RBP16.8■□□□□ 0.28
SHANK3-203ENST00000445220 DGAT2L6Q6ZPD8 337 aa16.8■□□□□ 0.28
SHANK3-203ENST00000445220 TIPARPQ7Z3E1 657 aaKnown RBP16.8■□□□□ 0.28
SHANK3-203ENST00000445220 OR11L1Q8NGX0 322 aa16.8■□□□□ 0.28
SHANK3-203ENST00000445220 POM121Q96HA1 1249 aa16.8■□□□□ 0.28
SHANK3-203ENST00000445220 MS4A7Q9GZW8 240 aaPredicted RBP16.8■□□□□ 0.28
SHANK3-203ENST00000445220 TRAV34A0A0B4J273 112 aa16.8■□□□□ 0.28
SHANK3-203ENST00000445220 CXCL3P19876 107 aa16.8■□□□□ 0.28
SHANK3-203ENST00000445220 HLA-DRB3P79483 266 aa16.8■□□□□ 0.28
SHANK3-203ENST00000445220 CA5BP1Q8WTZ4 195 aa16.8■□□□□ 0.28
SHANK3-203ENST00000445220 CCDC74BQ96LY2 380 aa16.8■□□□□ 0.28
SHANK3-203ENST00000445220 EDN3P14138 238 aa16.8■□□□□ 0.28
SHANK3-203ENST00000445220 RPL13AP40429 203 aaKnown RBP16.8■□□□□ 0.28
SHANK3-203ENST00000445220 ERVFC1-1P60608 527 aa16.8■□□□□ 0.28
SHANK3-203ENST00000445220 RAB32Q13637 225 aa16.8■□□□□ 0.28
SHANK3-203ENST00000445220 TMEM240Q5SV17 173 aa16.8■□□□□ 0.28
SHANK3-203ENST00000445220 THEM4Q5T1C6 240 aa16.8■□□□□ 0.28
SHANK3-203ENST00000445220 MEGF10Q96KG7 1140 aa16.8■□□□□ 0.28
SHANK3-203ENST00000445220 FKBP2P26885 142 aaKnown RBP16.8■□□□□ 0.28
SHANK3-203ENST00000445220 INPP5JQ15735 1006 aaPredicted RBP16.8■□□□□ 0.28
SHANK3-203ENST00000445220 SPNS2Q8IVW8 549 aa16.8■□□□□ 0.28
SHANK3-203ENST00000445220 OR13H1Q8NG92 308 aa16.8■□□□□ 0.28
SHANK3-203ENST00000445220 EXOGQ9Y2C4 368 aaKnown RBP16.8■□□□□ 0.28
SHANK3-203ENST00000445220 FAM221AA4D161 298 aa16.79■□□□□ 0.28
SHANK3-203ENST00000445220 CLEC18AA5D8T8 446 aa16.79■□□□□ 0.28
SHANK3-203ENST00000445220 OR5K3A6NET4 321 aa16.79■□□□□ 0.28
SHANK3-203ENST00000445220 ENSAO43768 121 aaKnown RBP16.79■□□□□ 0.28
SHANK3-203ENST00000445220 CLEC18CQ8NCF0 446 aa16.79■□□□□ 0.28
SHANK3-203ENST00000445220 FGF22Q9HCT0 170 aa16.79■□□□□ 0.28
SHANK3-203ENST00000445220 ELF5Q9UKW6 265 aaPredicted RBP16.79■□□□□ 0.28
SHANK3-203ENST00000445220 LOC102723971A0A1B0GUV8 181 aa16.79■□□□□ 0.28
SHANK3-203ENST00000445220 DUS4LO95620 317 aaKnown RBP16.79■□□□□ 0.28
SHANK3-203ENST00000445220 TTRP02766 147 aa16.79■□□□□ 0.28
SHANK3-203ENST00000445220 IRS1P35568 1242 aa16.79■□□□□ 0.28
SHANK3-203ENST00000445220 PGFP49763 221 aa16.79■□□□□ 0.28
SHANK3-203ENST00000445220 ADPRHP54922 357 aa16.79■□□□□ 0.28
SHANK3-203ENST00000445220 PNRC1Q12796 327 aaPredicted RBP16.79■□□□□ 0.28
SHANK3-203ENST00000445220 INSL4Q14641 139 aa16.79■□□□□ 0.28
SHANK3-203ENST00000445220 LYPD8Q6UX82 237 aa16.79■□□□□ 0.28
SHANK3-203ENST00000445220 TRILQ7L0X0 811 aa16.79■□□□□ 0.28
SHANK3-203ENST00000445220 OR52N4Q8NGI2 321 aa16.79■□□□□ 0.28
SHANK3-203ENST00000445220 DYRK2Q92630 601 aa16.79■□□□□ 0.28
SHANK3-203ENST00000445220 TXNIPQ9H3M7 391 aa16.79■□□□□ 0.28
SHANK3-203ENST00000445220 RIMS4Q9H426 269 aaPredicted RBP16.79■□□□□ 0.28
SHANK3-203ENST00000445220 HMGA2P52926 109 aa16.79■□□□□ 0.28
SHANK3-203ENST00000445220 RAC1P63000 192 aa16.79■□□□□ 0.28
SHANK3-203ENST00000445220 ZNF154Q13106 437 aa16.79■□□□□ 0.28
SHANK3-203ENST00000445220 BCORP1Q8N888 145 aa16.79■□□□□ 0.28
SHANK3-203ENST00000445220 IGHA2P01877 340 aa16.79■□□□□ 0.28
SHANK3-203ENST00000445220 ARG1P05089 322 aa16.79■□□□□ 0.28
SHANK3-203ENST00000445220 SSR4P51571 173 aa16.79■□□□□ 0.28
SHANK3-203ENST00000445220 DCAF12Q5T6F0 453 aa16.79■□□□□ 0.28
SHANK3-203ENST00000445220 DRAM2Q6UX65 266 aa16.79■□□□□ 0.28
SHANK3-203ENST00000445220 GPR137Q96N19 417 aa16.79■□□□□ 0.28
SHANK3-203ENST00000445220 DBX1A6NMT0 343 aa16.78■□□□□ 0.28
SHANK3-203ENST00000445220 UPK1AO00322 258 aa16.78■□□□□ 0.28
SHANK3-203ENST00000445220 GSTZ1O43708 216 aaPredicted RBP16.78■□□□□ 0.28
SHANK3-203ENST00000445220 OR2J2O76002 312 aa16.78■□□□□ 0.28
SHANK3-203ENST00000445220 CD46P15529 392 aa16.78■□□□□ 0.28
SHANK3-203ENST00000445220 CD96P40200 585 aa16.78■□□□□ 0.28
SHANK3-203ENST00000445220 IL22RA2Q969J5 263 aa16.78■□□□□ 0.28
SHANK3-203ENST00000445220 LAT2Q9GZY6 243 aa16.78■□□□□ 0.28
SHANK3-203ENST00000445220 TBX21Q9UL17 535 aa16.78■□□□□ 0.28
SHANK3-203ENST00000445220 Q6ZNB5 142 aa16.78■□□□□ 0.28
SHANK3-203ENST00000445220 ISOC2Q96AB3 205 aa16.78■□□□□ 0.28
SHANK3-203ENST00000445220 MBNL1Q9NR56 388 aaKnown RBP16.78■□□□□ 0.28
SHANK3-203ENST00000445220 TMED3Q9Y3Q3 217 aa16.78■□□□□ 0.28
SHANK3-203ENST00000445220 M0R135 149 aa16.78■□□□□ 0.28
SHANK3-203ENST00000445220 CTDSPLO15194 276 aa16.78■□□□□ 0.28
SHANK3-203ENST00000445220 CIDEAO60543 219 aa16.78■□□□□ 0.28
SHANK3-203ENST00000445220 RPLP1P05386 114 aaKnown RBP16.78■□□□□ 0.28
SHANK3-203ENST00000445220 EDDM3BP56851 147 aa16.78■□□□□ 0.28
SHANK3-203ENST00000445220 LAIR1Q6GTX8 287 aa16.78■□□□□ 0.28
SHANK3-203ENST00000445220 UBE3DQ7Z6J8 389 aa16.78■□□□□ 0.28
SHANK3-203ENST00000445220 ZNF799Q96GE5 643 aa16.78■□□□□ 0.28
SHANK3-203ENST00000445220 NTMQ9P121 344 aa16.78■□□□□ 0.28
SHANK3-203ENST00000445220 URB1O60287 2271 aaKnown RBP16.78■□□□□ 0.28
SHANK3-203ENST00000445220 CNEP1R1Q8N9A8 125 aa16.78■□□□□ 0.28
SHANK3-203ENST00000445220 PELI1Q96FA3 418 aa16.78■□□□□ 0.28
SHANK3-203ENST00000445220 GINS3Q9BRX5 216 aa16.78■□□□□ 0.28
SHANK3-203ENST00000445220 NAT8BQ9UHF3 227 aa16.78■□□□□ 0.28
SHANK3-203ENST00000445220 SLC17A4Q9Y2C5 497 aa16.78■□□□□ 0.28
SHANK3-203ENST00000445220 ARAP2Q8WZ64 1704 aa16.77■□□□□ 0.28
SHANK3-203ENST00000445220 C7orf77A4D0Y5 90 aa16.77■□□□□ 0.28
SHANK3-203ENST00000445220 H3BP45 60 aa16.77■□□□□ 0.28
SHANK3-203ENST00000445220 GP1BAP07359 652 aa16.77■□□□□ 0.28
SHANK3-203ENST00000445220 FAM209BQ5JX69 171 aa16.77■□□□□ 0.28
SHANK3-203ENST00000445220 OR11H7Q8NGC8 314 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms