RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 GAL3ST1Q99999 423 aa13.67□□□□□ -0.22
SNX13-204ENST00000444712 NKIRAS2Q9NYR9 191 aa13.67□□□□□ -0.22
SNX13-204ENST00000444712 DNAJC13O75165 2243 aa13.67□□□□□ -0.22
SNX13-204ENST00000444712 ZNF407Q9C0G0 2248 aa13.67□□□□□ -0.22
SNX13-204ENST00000444712 ARPC1BO15143 372 aaKnown RBP13.66□□□□□ -0.22
SNX13-204ENST00000444712 ICMTO60725 284 aa13.66□□□□□ -0.22
SNX13-204ENST00000444712 IL5P05113 134 aa13.66□□□□□ -0.22
SNX13-204ENST00000444712 AGTR1P30556 359 aa13.66□□□□□ -0.22
SNX13-204ENST00000444712 PTGFRP43088 359 aa13.66□□□□□ -0.22
SNX13-204ENST00000444712 VEGFCP49767 419 aa13.66□□□□□ -0.22
SNX13-204ENST00000444712 MRPS15P82914 257 aaKnown RBP13.66□□□□□ -0.22
SNX13-204ENST00000444712 ARL6IP1Q15041 203 aa13.66□□□□□ -0.22
SNX13-204ENST00000444712 UBE2V2Q15819 145 aa13.66□□□□□ -0.22
SNX13-204ENST00000444712 P4HA3Q7Z4N8 544 aa13.66□□□□□ -0.22
SNX13-204ENST00000444712 FGFBP3Q8TAT2 258 aa13.66□□□□□ -0.22
SNX13-204ENST00000444712 NANOS1Q8WY41 292 aaKnown RBP13.66□□□□□ -0.22
SNX13-204ENST00000444712 GMPPAQ96IJ6 420 aaPredicted RBP13.66□□□□□ -0.22
SNX13-204ENST00000444712 DMRTB1Q96MA1 342 aa13.66□□□□□ -0.22
SNX13-204ENST00000444712 C1orf147Q96MC9 270 aaPredicted RBP13.66□□□□□ -0.22
SNX13-204ENST00000444712 FYTTD1Q96QD9 318 aaKnown RBP13.66□□□□□ -0.22
SNX13-204ENST00000444712 C1QTNF5Q9BXJ0 243 aa13.66□□□□□ -0.22
SNX13-204ENST00000444712 LPAR5Q9H1C0 372 aa13.66□□□□□ -0.22
SNX13-204ENST00000444712 TP63Q9H3D4 680 aaPredicted RBP13.66□□□□□ -0.22
SNX13-204ENST00000444712 TMEM235A6NFC5 223 aa13.66□□□□□ -0.22
SNX13-204ENST00000444712 PROB1E7EW31 1015 aa13.66□□□□□ -0.22
SNX13-204ENST00000444712 RAB3DO95716 219 aa13.66□□□□□ -0.22
SNX13-204ENST00000444712 MPIG6BO95866 241 aa13.66□□□□□ -0.22
SNX13-204ENST00000444712 C1QBP02746 253 aa13.66□□□□□ -0.22
SNX13-204ENST00000444712 NAT2P11245 290 aa13.66□□□□□ -0.22
SNX13-204ENST00000444712 ERP29P30040 261 aaKnown RBP13.66□□□□□ -0.22
SNX13-204ENST00000444712 HGFACQ04756 655 aa13.66□□□□□ -0.22
SNX13-204ENST00000444712 FAPQ12884 760 aa13.66□□□□□ -0.22
SNX13-204ENST00000444712 MEF2DQ14814 521 aa13.66□□□□□ -0.22
SNX13-204ENST00000444712 CDNFQ49AH0 187 aa13.66□□□□□ -0.22
SNX13-204ENST00000444712 CLVS2Q5SYC1 327 aa13.66□□□□□ -0.22
SNX13-204ENST00000444712 LIX1LQ8IVB5 337 aa13.66□□□□□ -0.22
SNX13-204ENST00000444712 BEX2Q9BXY8 128 aa13.66□□□□□ -0.22
SNX13-204ENST00000444712 OR10A4Q9H209 315 aa13.66□□□□□ -0.22
SNX13-204ENST00000444712 POU2F3Q9UKI9 436 aa13.66□□□□□ -0.22
SNX13-204ENST00000444712 ZNF736B4DX44 427 aaPredicted RBP13.65□□□□□ -0.22
SNX13-204ENST00000444712 AQP7O14520 342 aa13.65□□□□□ -0.22
SNX13-204ENST00000444712 CRTAPO75718 401 aaPredicted RBP13.65□□□□□ -0.22
SNX13-204ENST00000444712 CD3DP04234 171 aa13.65□□□□□ -0.22
SNX13-204ENST00000444712 MPGP29372 298 aa13.65□□□□□ -0.22
SNX13-204ENST00000444712 PLP2Q04941 152 aa13.65□□□□□ -0.22
SNX13-204ENST00000444712 ZMYND11Q15326 602 aa13.65□□□□□ -0.22
SNX13-204ENST00000444712 PNLIPRP3Q17RR3 467 aa13.65□□□□□ -0.22
SNX13-204ENST00000444712 FAAP20Q6NZ36 180 aa13.65□□□□□ -0.22
SNX13-204ENST00000444712 LHFPL2Q6ZUX7 228 aa13.65□□□□□ -0.22
SNX13-204ENST00000444712 NUFIP2Q7Z417 695 aaKnown RBP13.65□□□□□ -0.22
SNX13-204ENST00000444712 OR2AE1Q8NHA4 323 aa13.65□□□□□ -0.22
SNX13-204ENST00000444712 TNFAIP8L1Q8WVP5 186 aa13.65□□□□□ -0.22
SNX13-204ENST00000444712 SPSB4Q96A44 273 aa13.65□□□□□ -0.22
SNX13-204ENST00000444712 GINS4Q9BRT9 223 aa13.65□□□□□ -0.22
SNX13-204ENST00000444712 SCP2D1Q9UJQ7 156 aa13.65□□□□□ -0.22
SNX13-204ENST00000444712 CSAG2Q9Y5P2 127 aa13.65□□□□□ -0.22
SNX13-204ENST00000444712 KCNMB2Q9Y691 235 aa13.65□□□□□ -0.22
SNX13-204ENST00000444712 hCG_38984A0A1B0GV85 526 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 MEIS3P1A6NDR6 274 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 SNRPGP15A8MWD9 76 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 SSNA1O43805 119 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 CD74P04233 296 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 ANXA3P12429 323 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 TBPP20226 339 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 OR3A2P47893 321 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 NKX2-5P52952 324 aaPredicted RBP13.64□□□□□ -0.23
SNX13-204ENST00000444712 PMP22Q01453 160 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 OR8B8Q15620 311 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 FBXW9Q5XUX1 488 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 GLDNQ6ZMI3 551 aaPredicted RBP13.64□□□□□ -0.23
SNX13-204ENST00000444712 COLCA1Q6ZS62 124 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 TRAPPC6BQ86SZ2 158 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 FJX1Q86VR8 437 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 ZADH2Q8N4Q0 377 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 RAB3CQ96E17 227 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 RNF170Q96K19 258 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 SLC25A21Q9BQT8 299 aaPredicted RBP13.64□□□□□ -0.23
SNX13-204ENST00000444712 OPA3Q9H6K4 179 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 IFT46Q9NQC8 304 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 ING4Q9UNL4 249 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 DISC1C4P0D8 188 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 SS18L1O75177 396 aaPredicted RBP13.64□□□□□ -0.23
SNX13-204ENST00000444712 GNG2P59768 71 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 RPS27AP62979 156 aaKnown RBP13.64□□□□□ -0.23
SNX13-204ENST00000444712 FCN2Q15485 313 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 ST3GAL2Q16842 350 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 TMEM42Q69YG0 159 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 RTL6Q6ICC9 239 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 PLXDC2Q6UX71 529 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 NPRL2Q8WTW4 380 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 SARAFQ96BY9 339 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 PTTG3PQ9NZH4 202 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 KCNN3Q9UGI6 736 aa13.64□□□□□ -0.23
SNX13-204ENST00000444712 A0A096LPE4 126 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 ZNF816-ZNF321PA0A0X1KG74 233 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 A0A1W2PPZ6 126 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 CREBL2O60519 120 aaPredicted RBP13.63□□□□□ -0.23
SNX13-204ENST00000444712 NRASP01111 189 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 SERPINA5P05154 406 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 ACKR3P25106 362 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms