RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 IL5RAQ01344 420 aa16.73■□□□□ 0.27
LRCH3-208ENST00000443727 CD276Q5ZPR3 534 aa16.73■□□□□ 0.27
LRCH3-208ENST00000443727 ZDHHC13Q8IUH4 622 aa16.73■□□□□ 0.27
LRCH3-208ENST00000443727 OR1M1Q8NGA1 313 aa16.73■□□□□ 0.27
LRCH3-208ENST00000443727 LRRC29Q8WV35 223 aa16.73■□□□□ 0.27
LRCH3-208ENST00000443727 MROQ9BYG7 248 aa16.73■□□□□ 0.27
LRCH3-208ENST00000443727 H2AFY2Q9P0M6 372 aaPredicted RBP16.73■□□□□ 0.27
LRCH3-208ENST00000443727 ENSAO43768 121 aaKnown RBP16.72■□□□□ 0.27
LRCH3-208ENST00000443727 PRKYO43930 277 aa16.72■□□□□ 0.27
LRCH3-208ENST00000443727 MITFO75030 526 aaPredicted RBP16.72■□□□□ 0.27
LRCH3-208ENST00000443727 CIB2O75838 187 aa16.72■□□□□ 0.27
LRCH3-208ENST00000443727 GYPAP02724 150 aa16.72■□□□□ 0.27
LRCH3-208ENST00000443727 PPIAL4GP0DN37 164 aa16.72■□□□□ 0.27
LRCH3-208ENST00000443727 ZNF841Q6ZN19 808 aa16.72■□□□□ 0.27
LRCH3-208ENST00000443727 COMMD2Q86X83 199 aa16.72■□□□□ 0.27
LRCH3-208ENST00000443727 GCSAMQ8N6F7 178 aa16.72■□□□□ 0.27
LRCH3-208ENST00000443727 FAM81AQ8TBF8 368 aa16.72■□□□□ 0.27
LRCH3-208ENST00000443727 RTL8AQ9BWD3 113 aa16.72■□□□□ 0.27
LRCH3-208ENST00000443727 RNPEPL1Q9HAU8 725 aa16.72■□□□□ 0.27
LRCH3-208ENST00000443727 ZNF391Q9UJN7 358 aa16.72■□□□□ 0.27
LRCH3-208ENST00000443727 TMEM14AQ9Y6G1 99 aa16.72■□□□□ 0.27
LRCH3-208ENST00000443727 IGHV3OR15-7A0A075B7D8 119 aa16.71■□□□□ 0.27
LRCH3-208ENST00000443727 ZNF850A8MQ14 1090 aa16.71■□□□□ 0.27
LRCH3-208ENST00000443727 PSMD9O00233 223 aa16.71■□□□□ 0.27
LRCH3-208ENST00000443727 FCGR1AP12314 374 aa16.71■□□□□ 0.27
LRCH3-208ENST00000443727 CSNK2BP67870 215 aa16.71■□□□□ 0.27
LRCH3-208ENST00000443727 POU4F2Q12837 409 aa16.71■□□□□ 0.27
LRCH3-208ENST00000443727 PRDX4Q13162 271 aa16.71■□□□□ 0.27
LRCH3-208ENST00000443727 MICBQ29980 383 aa16.71■□□□□ 0.27
LRCH3-208ENST00000443727 KCTD8Q6ZWB6 473 aa16.71■□□□□ 0.27
LRCH3-208ENST00000443727 AMIGO2Q86SJ2 522 aa16.71■□□□□ 0.27
LRCH3-208ENST00000443727 WDR86Q86TI4 376 aa16.71■□□□□ 0.27
LRCH3-208ENST00000443727 BCL6BQ8N143 479 aaPredicted RBP16.71■□□□□ 0.27
LRCH3-208ENST00000443727 GALNT4Q8N4A0 578 aa16.71■□□□□ 0.27
LRCH3-208ENST00000443727 ZDHHC22Q8N966 263 aa16.71■□□□□ 0.27
LRCH3-208ENST00000443727 OR8B12Q8NGG6 310 aa16.71■□□□□ 0.27
LRCH3-208ENST00000443727 ASB17Q8WXJ9 295 aa16.71■□□□□ 0.27
LRCH3-208ENST00000443727 PIGCQ92535 297 aa16.71■□□□□ 0.27
LRCH3-208ENST00000443727 UPRTQ96BW1 309 aa16.71■□□□□ 0.27
LRCH3-208ENST00000443727 HIST1H2AAQ96QV6 131 aa16.71■□□□□ 0.27
LRCH3-208ENST00000443727 CNN2Q99439 309 aaKnown RBP16.71■□□□□ 0.27
LRCH3-208ENST00000443727 PPP1R3EQ9H7J1 279 aa16.71■□□□□ 0.27
LRCH3-208ENST00000443727 ABCB9Q9NP78 766 aa16.71■□□□□ 0.27
LRCH3-208ENST00000443727 ESM1Q9NQ30 184 aa16.71■□□□□ 0.27
LRCH3-208ENST00000443727 CTSZQ9UBR2 303 aa16.71■□□□□ 0.27
LRCH3-208ENST00000443727 ENOPH1Q9UHY7 261 aa16.71■□□□□ 0.27
LRCH3-208ENST00000443727 MPC1Q9Y5U8 109 aa16.71■□□□□ 0.27
LRCH3-208ENST00000443727 TRAV40A0A0B4J280 105 aa16.7■□□□□ 0.26
LRCH3-208ENST00000443727 TMEM269A0A1B0GVZ9 245 aa16.7■□□□□ 0.26
LRCH3-208ENST00000443727 CCDC182A6NF36 153 aa16.7■□□□□ 0.26
LRCH3-208ENST00000443727 C22orf46C9J442 243 aa16.7■□□□□ 0.26
LRCH3-208ENST00000443727 LHBP01229 141 aa16.7■□□□□ 0.26
LRCH3-208ENST00000443727 IGHV4-38-2P0DP08 117 aa16.7■□□□□ 0.26
LRCH3-208ENST00000443727 MTNR1AP48039 350 aa16.7■□□□□ 0.26
LRCH3-208ENST00000443727 FGF12P61328 243 aa16.7■□□□□ 0.26
LRCH3-208ENST00000443727 UBA52P62987 128 aaKnown RBP16.7■□□□□ 0.26
LRCH3-208ENST00000443727 BAMBIQ13145 260 aa16.7■□□□□ 0.26
LRCH3-208ENST00000443727 DEGS2Q6QHC5 323 aa16.7■□□□□ 0.26
LRCH3-208ENST00000443727 DOK3Q7L591 496 aa16.7■□□□□ 0.26
LRCH3-208ENST00000443727 FAM90A1Q86YD7 464 aa16.7■□□□□ 0.26
LRCH3-208ENST00000443727 TCEANCQ8N8B7 351 aa16.7■□□□□ 0.26
LRCH3-208ENST00000443727 DACT3Q96B18 629 aaPredicted RBP16.7■□□□□ 0.26
LRCH3-208ENST00000443727 TTTY10Q9BZA0 68 aa16.7■□□□□ 0.26
LRCH3-208ENST00000443727 RASSF4Q9H2L5 321 aa16.7■□□□□ 0.26
LRCH3-208ENST00000443727 IKZF2Q9UKS7 526 aa16.7■□□□□ 0.26
LRCH3-208ENST00000443727 ACOD1A6NK06 481 aa16.69■□□□□ 0.26
LRCH3-208ENST00000443727 M0R129 80 aa16.69■□□□□ 0.26
LRCH3-208ENST00000443727 CDIPTO14735 213 aa16.69■□□□□ 0.26
LRCH3-208ENST00000443727 TMPRSS2O15393 492 aa16.69■□□□□ 0.26
LRCH3-208ENST00000443727 CST4P01036 141 aa16.69■□□□□ 0.26
LRCH3-208ENST00000443727 EGR1P18146 543 aa16.69■□□□□ 0.26
LRCH3-208ENST00000443727 ACKR3P25106 362 aa16.69■□□□□ 0.26
LRCH3-208ENST00000443727 GMFBP60983 142 aa16.69■□□□□ 0.26
LRCH3-208ENST00000443727 ZNF829Q3KNS6 432 aaPredicted RBP16.69■□□□□ 0.26
LRCH3-208ENST00000443727 SLX4IPQ5VYV7 408 aa16.69■□□□□ 0.26
LRCH3-208ENST00000443727 TEX36Q5VZQ5 186 aa16.69■□□□□ 0.26
LRCH3-208ENST00000443727 WDR82Q6UXN9 313 aa16.69■□□□□ 0.26
LRCH3-208ENST00000443727 MEPCEQ7L2J0 689 aaKnown RBP16.69■□□□□ 0.26
LRCH3-208ENST00000443727 BCDIN3DQ7Z5W3 292 aaKnown RBP16.69■□□□□ 0.26
LRCH3-208ENST00000443727 C11orf53Q8IXP5 236 aa16.69■□□□□ 0.26
LRCH3-208ENST00000443727 LRTOMTQ8WZ04 291 aa16.69■□□□□ 0.26
LRCH3-208ENST00000443727 ITPKCQ96DU7 683 aa16.69■□□□□ 0.26
LRCH3-208ENST00000443727 RNF170Q96K19 258 aa16.69■□□□□ 0.26
LRCH3-208ENST00000443727 LYZL4Q96KX0 146 aa16.69■□□□□ 0.26
LRCH3-208ENST00000443727 PKP2Q99959 881 aa16.69■□□□□ 0.26
LRCH3-208ENST00000443727 PCGF1Q9BSM1 259 aa16.69■□□□□ 0.26
LRCH3-208ENST00000443727 SLC22A31A6NKX4 558 aa16.68■□□□□ 0.26
LRCH3-208ENST00000443727 TMEM210A6NLX4 147 aa16.68■□□□□ 0.26
LRCH3-208ENST00000443727 ZNF254O75437 659 aa16.68■□□□□ 0.26
LRCH3-208ENST00000443727 LIPFP07098 398 aa16.68■□□□□ 0.26
LRCH3-208ENST00000443727 MUC1P15941 1255 aaPredicted RBP16.68■□□□□ 0.26
LRCH3-208ENST00000443727 MAP2K3P46734 347 aa16.68■□□□□ 0.26
LRCH3-208ENST00000443727 RIDAP52758 137 aaKnown RBP16.68■□□□□ 0.26
LRCH3-208ENST00000443727 KDM4DQ6B0I6 523 aa16.68■□□□□ 0.26
LRCH3-208ENST00000443727 ZDHHC23Q8IYP9 409 aa16.68■□□□□ 0.26
LRCH3-208ENST00000443727 ZNF679Q8IYX0 411 aa16.68■□□□□ 0.26
LRCH3-208ENST00000443727 C3orf56Q8N813 242 aa16.68■□□□□ 0.26
LRCH3-208ENST00000443727 PNLDC1Q8NA58 520 aaKnown RBP16.68■□□□□ 0.26
LRCH3-208ENST00000443727 TMEM163Q8TC26 289 aa16.68■□□□□ 0.26
LRCH3-208ENST00000443727 OR5P3Q8WZ94 311 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms