RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 POLR3HQ9Y535 204 aaPredicted RBP5.27□□□□□ -1.57
SSXP3-201ENST00000442971 SLC28A1O00337 649 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 FGF16O43320 207 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 TIPRLO75663 272 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 OR4F21O95013 312 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 ACAA1P09110 424 aaPredicted RBP5.26□□□□□ -1.57
SSXP3-201ENST00000442971 HTR1DP28221 377 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 OTX1P32242 354 aaPredicted RBP5.26□□□□□ -1.57
SSXP3-201ENST00000442971 NPBWR2P48146 333 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 PCBD1P61457 104 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 RPL31P62899 125 aaKnown RBP5.26□□□□□ -1.57
SSXP3-201ENST00000442971 HAMPP81172 84 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 MGAT5Q09328 741 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 CASP8Q14790 479 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 SLC35F1Q5T1Q4 408 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 ATAD3BQ5T9A4 648 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 OR4F3Q6IEY1 312 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 OGFOD2Q6N063 350 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 NKAIN4Q8IVV8 208 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 LAX1Q8IWV1 398 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 ZNF440Q8IYI8 595 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 SLC35F6Q8N357 371 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 RHEBL1Q8TAI7 183 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 SLC38A4Q969I6 547 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 CREB3L1Q96BA8 519 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 DESI2Q9BSY9 194 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 ADAT1Q9BUB4 502 aaKnown RBP5.26□□□□□ -1.57
SSXP3-201ENST00000442971 TOLLIPQ9H0E2 274 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 YY1AP1Q9H869 796 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 WDR76Q9H967 626 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 LZTFL1Q9NQ48 299 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 SNTG1Q9NSN8 517 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 NSMCE4AQ9NXX6 385 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 VSX1Q9NZR4 365 aaPredicted RBP5.26□□□□□ -1.57
SSXP3-201ENST00000442971 ZNF443Q9Y2A4 671 aaPredicted RBP5.26□□□□□ -1.57
SSXP3-201ENST00000442971 PIGLQ9Y2B2 252 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 MRPS28Q9Y2Q9 187 aaKnown RBP5.26□□□□□ -1.57
SSXP3-201ENST00000442971 NOP16Q9Y3C1 178 aaKnown RBP5.26□□□□□ -1.57
SSXP3-201ENST00000442971 UGT2A1Q9Y4X1 527 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 NACAE9PAV3 2078 aa5.26□□□□□ -1.57
SSXP3-201ENST00000442971 TRAV36DV7A0A075B6V5 113 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 C17orf98A8MV24 154 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 TMEM114B3SHH9 223 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 NPIPB8E9PQR5 432 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 C11orf98E9PRG8 122 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 H3BQF6 201 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 PLPP3O14495 311 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 GMDSO60547 372 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 TBX19O60806 448 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 AMBPP02760 352 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 CST2P09228 141 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 FAM106CPP0CH98 169 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 CPA3P15088 417 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 NAT1P18440 290 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 VDAC1P21796 283 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 MATN1P21941 496 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 LAP3P28838 519 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 MELKQ14680 651 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 ZKSCAN8Q15776 578 aaPredicted RBP5.25□□□□□ -1.57
SSXP3-201ENST00000442971 C10orf128Q5T292 105 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 MRPL2Q5T653 305 aaKnown RBP5.25□□□□□ -1.57
SSXP3-201ENST00000442971 NANOGP8Q6NSW7 305 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 CCDC144NLQ6NUI1 221 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 C5orf46Q6UWT4 87 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 TMPRSS11FQ6ZWK6 438 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 RPS27LQ71UM5 84 aaKnown RBP5.25□□□□□ -1.57
SSXP3-201ENST00000442971 ZDHHC21Q8IVQ6 265 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 PPIL6Q8IXY8 311 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 DPP10Q8N608 796 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 ZNRF1Q8ND25 227 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 TMEM185AQ8NFB2 350 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 ANGPTL6Q8NI99 470 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 SLC7A6Q92536 515 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 ZBTB18Q99592 522 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 SRSF8Q9BRL6 282 aaKnown RBP5.25□□□□□ -1.57
SSXP3-201ENST00000442971 DPY30Q9C005 99 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 SLC22A4Q9H015 551 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 PLEKHA1Q9HB21 404 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 ATAD3AQ9NVI7 634 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 KLHL14Q9P2G3 628 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 ZNF225Q9UK10 706 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 GUCA1BQ9UMX6 200 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 SAR1BQ9Y6B6 198 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 CAPN6Q9Y6Q1 641 aa5.25□□□□□ -1.57
SSXP3-201ENST00000442971 TRAV10A0A0B4J240 114 aa5.24□□□□□ -1.57
SSXP3-201ENST00000442971 GRK5P34947 590 aa5.24□□□□□ -1.57
SSXP3-201ENST00000442971 KRTAP10-1P60331 282 aa5.24□□□□□ -1.57
SSXP3-201ENST00000442971 GMFBP60983 142 aa5.24□□□□□ -1.57
SSXP3-201ENST00000442971 ESRRGP62508 458 aa5.24□□□□□ -1.57
SSXP3-201ENST00000442971 VSNL1P62760 191 aa5.24□□□□□ -1.57
SSXP3-201ENST00000442971 GUCY2DQ02846 1103 aa5.24□□□□□ -1.57
SSXP3-201ENST00000442971 GALEQ14376 348 aa5.24□□□□□ -1.57
SSXP3-201ENST00000442971 ZNF273Q14593 569 aa5.24□□□□□ -1.57
SSXP3-201ENST00000442971 VMACQ2NL98 169 aa5.24□□□□□ -1.57
SSXP3-201ENST00000442971 LCN8Q6JVE9 175 aa5.24□□□□□ -1.57
SSXP3-201ENST00000442971 SMARCD3Q6STE5 483 aa5.24□□□□□ -1.57
SSXP3-201ENST00000442971 IL34Q6ZMJ4 242 aa5.24□□□□□ -1.57
SSXP3-201ENST00000442971 RTN4RL2Q86UN3 420 aa5.24□□□□□ -1.57
SSXP3-201ENST00000442971 CALHM1Q8IU99 346 aa5.24□□□□□ -1.57
SSXP3-201ENST00000442971 C11orf53Q8IXP5 236 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms