RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 ARF6P62330 175 aa9.76□□□□□ -0.85
TTC28-203ENST00000442232 FAM3AP98173 230 aa9.76□□□□□ -0.85
TTC28-203ENST00000442232 HOXA4Q00056 320 aaPredicted RBP9.76□□□□□ -0.85
TTC28-203ENST00000442232 TEX36Q5VZQ5 186 aa9.76□□□□□ -0.85
TTC28-203ENST00000442232 TREML4Q6UXN2 200 aa9.76□□□□□ -0.85
TTC28-203ENST00000442232 Q6YL49 198 aa9.76□□□□□ -0.85
TTC28-203ENST00000442232 KCTD8Q6ZWB6 473 aa9.76□□□□□ -0.85
TTC28-203ENST00000442232 OR1M1Q8NGA1 313 aa9.76□□□□□ -0.85
TTC28-203ENST00000442232 CCDC124Q96CT7 223 aaKnown RBP9.76□□□□□ -0.85
TTC28-203ENST00000442232 TBX15Q96SF7 602 aa9.76□□□□□ -0.85
TTC28-203ENST00000442232 ABHD6Q9BV23 337 aa9.76□□□□□ -0.85
TTC28-203ENST00000442232 TEX12Q9BXU0 123 aa9.76□□□□□ -0.85
TTC28-203ENST00000442232 OR51V1Q9H2C8 321 aa9.76□□□□□ -0.85
TTC28-203ENST00000442232 RASSF4Q9H2L5 321 aa9.76□□□□□ -0.85
TTC28-203ENST00000442232 PRDM13Q9H4Q3 707 aa9.76□□□□□ -0.85
TTC28-203ENST00000442232 MED20Q9H944 212 aa9.76□□□□□ -0.85
TTC28-203ENST00000442232 ZNF556Q9HAH1 456 aa9.76□□□□□ -0.85
TTC28-203ENST00000442232 SMURF1Q9HCE7 757 aa9.76□□□□□ -0.85
TTC28-203ENST00000442232 VNN3Q9NY84 501 aa9.76□□□□□ -0.85
TTC28-203ENST00000442232 KAAG1Q9UBP8 84 aa9.76□□□□□ -0.85
TTC28-203ENST00000442232 DNAJB11Q9UBS4 358 aa9.76□□□□□ -0.85
TTC28-203ENST00000442232 FAM96BQ9Y3D0 163 aa9.76□□□□□ -0.85
TTC28-203ENST00000442232 IGHV1-69DA0A0B4J2H0 117 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 CENPVL3A0A0U1RRI6 287 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 hCG_38984A0A1B0GV85 526 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 BTBD17A6NE02 478 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 ARRDC5A6NEK1 342 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 FAM183AA6NL82 134 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 TNFRSF13BO14836 293 aaPredicted RBP9.75□□□□□ -0.85
TTC28-203ENST00000442232 WIPF1O43516 503 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 NDUFB3O43676 98 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 LHBP01229 141 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 IGHV1-69P01742 117 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 MELTFP08582 738 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 MMP9P14780 707 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 HOXB6P17509 224 aaKnown RBP9.75□□□□□ -0.85
TTC28-203ENST00000442232 POU1F1P28069 291 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 RPL15P61313 204 aaKnown RBP9.75□□□□□ -0.85
TTC28-203ENST00000442232 RPS7P62081 194 aaKnown RBP9.75□□□□□ -0.85
TTC28-203ENST00000442232 LRRC10Q5BKY1 277 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 BRICD5Q6PL45 260 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 CD300LDQ6UXZ3 194 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 RHOUQ7L0Q8 258 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 IQCF1Q8N6M8 205 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 ZNF454Q8N9F8 522 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 PAPD5Q8NDF8 572 aaKnown RBP9.75□□□□□ -0.85
TTC28-203ENST00000442232 FAM81AQ8TBF8 368 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 THEM6Q8WUY1 208 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 LRTOMTQ8WZ04 291 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 C12orf43Q96C57 262 aaKnown RBP9.75□□□□□ -0.85
TTC28-203ENST00000442232 ASB9Q96DX5 294 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 HIST1H2AAQ96QV6 131 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 CCL13Q99616 98 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 NIPSNAP1Q9BPW8 284 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 CHIAQ9BZP6 476 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 SIRPDQ9H106 197 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 CNTD2Q9H8S5 307 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 RPUSD1Q9UJJ7 312 aaKnown RBP9.75□□□□□ -0.85
TTC28-203ENST00000442232 MPC1Q9Y5U8 109 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 KPTNQ9Y664 436 aa9.75□□□□□ -0.85
TTC28-203ENST00000442232 PKD1L1Q8TDX9 2849 aa9.74□□□□□ -0.85
TTC28-203ENST00000442232 A0A1B0GVI7 797 aa9.74□□□□□ -0.85
TTC28-203ENST00000442232 TMEM210A6NLX4 147 aa9.74□□□□□ -0.85
TTC28-203ENST00000442232 GPR37O15354 613 aa9.74□□□□□ -0.85
TTC28-203ENST00000442232 E2F6O75461 281 aa9.74□□□□□ -0.85
TTC28-203ENST00000442232 NDUFA7O95182 113 aa9.74□□□□□ -0.85
TTC28-203ENST00000442232 ANOS1P23352 680 aa9.74□□□□□ -0.85
TTC28-203ENST00000442232 EEF1B2P24534 225 aaKnown RBP9.74□□□□□ -0.85
TTC28-203ENST00000442232 OPRL1P41146 370 aa9.74□□□□□ -0.85
TTC28-203ENST00000442232 CSNK2BP67870 215 aa9.74□□□□□ -0.85
TTC28-203ENST00000442232 POU4F2Q12837 409 aa9.74□□□□□ -0.85
TTC28-203ENST00000442232 IKZF1Q13422 519 aa9.74□□□□□ -0.85
TTC28-203ENST00000442232 CDONQ4KMG0 1287 aa9.74□□□□□ -0.85
TTC28-203ENST00000442232 KLHL12Q53G59 568 aa9.74□□□□□ -0.85
TTC28-203ENST00000442232 WDR38Q5JTN6 314 aa9.74□□□□□ -0.85
TTC28-203ENST00000442232 LINC01590Q5TEZ4 76 aa9.74□□□□□ -0.85
TTC28-203ENST00000442232 OLFML2AQ68BL7 652 aa9.74□□□□□ -0.85
TTC28-203ENST00000442232 WDR82Q6UXN9 313 aa9.74□□□□□ -0.85
TTC28-203ENST00000442232 VMO1Q7Z5L0 202 aa9.74□□□□□ -0.85
TTC28-203ENST00000442232 TIGD4Q8IY51 512 aa9.74□□□□□ -0.85
TTC28-203ENST00000442232 KIR3DL3Q8N743 410 aa9.74□□□□□ -0.85
TTC28-203ENST00000442232 CCDC197Q8NCU1 140 aa9.74□□□□□ -0.85
TTC28-203ENST00000442232 H1FXQ92522 213 aaKnown RBP9.74□□□□□ -0.85
TTC28-203ENST00000442232 DYRK2Q92630 601 aa9.74□□□□□ -0.85
TTC28-203ENST00000442232 SGK3Q96BR1 496 aa9.74□□□□□ -0.85
TTC28-203ENST00000442232 FEVQ99581 238 aa9.74□□□□□ -0.85
TTC28-203ENST00000442232 DPAGT1Q9H3H5 408 aa9.74□□□□□ -0.85
TTC28-203ENST00000442232 NIPAL2Q9H841 368 aa9.74□□□□□ -0.85
TTC28-203ENST00000442232 PDP1Q9P0J1 537 aaPredicted RBP9.74□□□□□ -0.85
TTC28-203ENST00000442232 ZNF391Q9UJN7 358 aa9.74□□□□□ -0.85
TTC28-203ENST00000442232 RHBDD3Q9Y3P4 386 aa9.74□□□□□ -0.85
TTC28-203ENST00000442232 MEGF8Q7Z7M0 2845 aa9.73□□□□□ -0.85
TTC28-203ENST00000442232 M0QZ24 198 aa9.73□□□□□ -0.85
TTC28-203ENST00000442232 CDIPTO14735 213 aa9.73□□□□□ -0.85
TTC28-203ENST00000442232 PRODHO43272 600 aa9.73□□□□□ -0.85
TTC28-203ENST00000442232 HMGN1P05114 100 aa9.73□□□□□ -0.85
TTC28-203ENST00000442232 FBP1P09467 338 aa9.73□□□□□ -0.85
TTC28-203ENST00000442232 GMFBP60983 142 aa9.73□□□□□ -0.85
TTC28-203ENST00000442232 GUCA2AQ02747 115 aa9.73□□□□□ -0.85
TTC28-203ENST00000442232 PRDX4Q13162 271 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms