RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 RTL6Q6ICC9 239 aa11.47□□□□□ -0.57
CPSF4-206ENST00000441580 OR10K2Q6IF99 312 aa11.47□□□□□ -0.57
CPSF4-206ENST00000441580 STEAP1BQ6NZ63 245 aa11.47□□□□□ -0.57
CPSF4-206ENST00000441580 IGFL3Q6UXB1 125 aa11.47□□□□□ -0.57
CPSF4-206ENST00000441580 ZNF782Q6ZMW2 699 aaPredicted RBP11.47□□□□□ -0.57
CPSF4-206ENST00000441580 NAA40Q86UY6 237 aa11.47□□□□□ -0.57
CPSF4-206ENST00000441580 GABRG1Q8N1C3 465 aa11.47□□□□□ -0.57
CPSF4-206ENST00000441580 PAQR4Q8N4S7 273 aaPredicted RBP11.47□□□□□ -0.57
CPSF4-206ENST00000441580 OR1K1Q8NGR3 316 aa11.47□□□□□ -0.57
CPSF4-206ENST00000441580 OR2AE1Q8NHA4 323 aa11.47□□□□□ -0.57
CPSF4-206ENST00000441580 TNFAIP8L1Q8WVP5 186 aa11.47□□□□□ -0.57
CPSF4-206ENST00000441580 SEH1LQ96EE3 360 aa11.47□□□□□ -0.57
CPSF4-206ENST00000441580 COL25A1Q9BXS0 654 aaPredicted RBP11.47□□□□□ -0.57
CPSF4-206ENST00000441580 GPN1Q9HCN4 374 aaPredicted RBP11.47□□□□□ -0.57
CPSF4-206ENST00000441580 KCNN3Q9UGI6 736 aa11.47□□□□□ -0.57
CPSF4-206ENST00000441580 MYO15AQ9UKN7 3530 aa11.47□□□□□ -0.57
CPSF4-206ENST00000441580 ZNF736B4DX44 427 aaPredicted RBP11.46□□□□□ -0.57
CPSF4-206ENST00000441580 J3QW42 95 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 ARPC1BO15143 372 aaKnown RBP11.46□□□□□ -0.57
CPSF4-206ENST00000441580 CRTAPO75718 401 aaPredicted RBP11.46□□□□□ -0.57
CPSF4-206ENST00000441580 CNOT4O95628 575 aaKnown RBP11.46□□□□□ -0.57
CPSF4-206ENST00000441580 CD74P04233 296 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 IL5P05113 134 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 PATE4P0C8F1 98 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 NAT2P11245 290 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 ANXA3P12429 323 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 HIST1H1DP16402 221 aaKnown RBP11.46□□□□□ -0.57
CPSF4-206ENST00000441580 CPT2P23786 658 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 PTGFRP43088 359 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 CBX5P45973 191 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 GNG2P59768 71 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 CD83Q01151 205 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 MALLQ13021 153 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 CBX3Q13185 183 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 UBE2V2Q15819 145 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 LINC00303Q3SY05 128 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 MOGAT2Q3SYC2 334 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 ACTBL2Q562R1 376 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 TMEM255AQ5JRV8 349 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 COLCA1Q6ZS62 124 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 NUFIP2Q7Z417 695 aaKnown RBP11.46□□□□□ -0.57
CPSF4-206ENST00000441580 TRAPPC6BQ86SZ2 158 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 CCDC36Q8IYA8 594 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 CHST4Q8NCG5 386 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 FGFBP3Q8TAT2 258 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 APOBEC3DQ96AK3 386 aaPredicted RBP11.46□□□□□ -0.57
CPSF4-206ENST00000441580 DACT3Q96B18 629 aaPredicted RBP11.46□□□□□ -0.57
CPSF4-206ENST00000441580 SPACA5Q96QH8 159 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 GAL3ST1Q99999 423 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 LPAR5Q9H1C0 372 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 RANGRFQ9HD47 186 aaPredicted RBP11.46□□□□□ -0.57
CPSF4-206ENST00000441580 IFT46Q9NQC8 304 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.46□□□□□ -0.57
CPSF4-206ENST00000441580 PLSCR2Q9NRY7 297 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 PTTG3PQ9NZH4 202 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 KLK13Q9UKR3 277 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 WDR87Q6ZQQ6 2873 aa11.46□□□□□ -0.57
CPSF4-206ENST00000441580 VPS13AQ96RL7 3174 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 ARHGAP21Q5T5U3 1957 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 OR14I1A6ND48 311 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 A8MV72 311 aaPredicted RBP11.45□□□□□ -0.58
CPSF4-206ENST00000441580 ZNF780AO75290 641 aaPredicted RBP11.45□□□□□ -0.58
CPSF4-206ENST00000441580 RAB3DO95716 219 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 C1QBP02746 253 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 CD79AP11912 226 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 EDN3P14138 238 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 ACKR3P25106 362 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 MPZP25189 248 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 VEGFCP49767 419 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 RPS27AP62979 156 aaKnown RBP11.45□□□□□ -0.58
CPSF4-206ENST00000441580 MRPS15P82914 257 aaKnown RBP11.45□□□□□ -0.58
CPSF4-206ENST00000441580 TGFBR3Q03167 851 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 PPA1Q15181 289 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 SF3B4Q15427 424 aaKnown RBP eCLIP11.45□□□□□ -0.583e-7■■■■■ 27.6
CPSF4-206ENST00000441580 SFRP4Q6FHJ7 346 aaPredicted RBP11.45□□□□□ -0.58
CPSF4-206ENST00000441580 OR2A2Q6IF42 318 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 ASCL5Q7RTU5 278 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 FJX1Q86VR8 437 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 FTMTQ8N4E7 242 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 SNIP1Q8TAD8 396 aaKnown RBP11.45□□□□□ -0.58
CPSF4-206ENST00000441580 NPRL2Q8WTW4 380 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 PIGTQ969N2 578 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 RAB3CQ96E17 227 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 BORCS8Q96FH0 119 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 MED30Q96HR3 178 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 GINS4Q9BRT9 223 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 TM2D1Q9BX74 207 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 C12orf49Q9H741 205 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 NOX3Q9HBY0 568 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 GPR173Q9NS66 373 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 SLC2A8Q9NY64 477 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 B3GNT2Q9NY97 397 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 PRSS50Q9UI38 385 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 SCP2D1Q9UJQ7 156 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 PAIP2BQ9ULR5 123 aaKnown RBP11.45□□□□□ -0.58
CPSF4-206ENST00000441580 ANAPC10Q9UM13 185 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 SLC7A11Q9UPY5 501 aa11.45□□□□□ -0.58
CPSF4-206ENST00000441580 A0A096LPE4 126 aa11.44□□□□□ -0.58
CPSF4-206ENST00000441580 A0A1W2PPZ6 126 aa11.44□□□□□ -0.58
CPSF4-206ENST00000441580 SNRPGP15A8MWD9 76 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms