RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 NAT2P11245 290 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 CTSSP25774 331 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 AGTR1P30556 359 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 PSMB10P40306 273 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 HTR2BP41595 481 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 OR3A3P47888 321 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 GMFBP60983 142 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 FAM27E3Q08E93 113 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 ARL6IP1Q15041 203 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 ACKR1Q16570 336 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 ACTBL2Q562R1 376 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 WDR38Q5JTN6 314 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 THEM4Q5T1C6 240 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 HES5Q5TA89 166 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 TMEM225Q6GV28 225 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 ZNF529Q6P280 563 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 Q6ZSR3 168 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 SEM1Q6ZVN7 128 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 LYPD6Q86Y78 171 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 ZDHHC22Q8N966 263 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 ZNF680Q8NEM1 530 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 SLC26A10Q8NG04 563 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 SMAP2Q8WU79 429 aaPredicted RBP4.18□□□□□ -1.74
EDEM3-203ENST00000439962 RNF133Q8WVZ7 376 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 C17orf50Q8WW18 174 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 SNAPC3Q92966 411 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 NTNG2Q96CW9 530 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 POM121Q96HA1 1249 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 SYT4Q9H2B2 425 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 HEXA-AS1Q9H8Q6 139 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 SH2D2AQ9NP31 389 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 SERINC1Q9NRX5 453 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 PLSCR3Q9NRY6 295 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 EIF3KQ9UBQ5 218 aaKnown RBP4.18□□□□□ -1.74
EDEM3-203ENST00000439962 GHRLQ9UBU3 117 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 ZNF222Q9UK12 451 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 NUP50Q9UKX7 468 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 RAB22AQ9UL26 194 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 KLHDC2Q9Y2U9 406 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 MAB21L2Q9Y586 359 aa4.18□□□□□ -1.74
EDEM3-203ENST00000439962 TRAV6A0A075B6T7 132 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 PLSCR5A0PG75 271 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 METTL21EPA6NDL7 271 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 A8MV72 311 aaPredicted RBP4.17□□□□□ -1.74
EDEM3-203ENST00000439962 PRR32B1ATL7 298 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 M0R233 179 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 CDK2AP1O14519 115 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 B3GALNT1O75752 331 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 CLDN14O95500 239 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 MT-ND4P03905 459 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 CHRM2P08172 466 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 COX6B1P14854 86 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 ZNF823P16415 610 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 HTR2CP28335 458 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 GRPRP30550 384 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 SRP9P49458 86 aaKnown RBP4.17□□□□□ -1.74
EDEM3-203ENST00000439962 HCCSP53701 268 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 RAB14P61106 215 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 DBPQ10586 325 aaPredicted RBP4.17□□□□□ -1.74
EDEM3-203ENST00000439962 GK2Q14410 553 aaPredicted RBP4.17□□□□□ -1.74
EDEM3-203ENST00000439962 ZNF345Q14585 488 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 PPA1Q15181 289 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 GRK1Q15835 563 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 C1orf185Q5T7R7 199 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 TMEM65Q6PI78 240 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 PGAP1Q75T13 922 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 DPY19L4Q7Z388 723 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 PM20D2Q8IYS1 436 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 ARMC10Q8N2F6 343 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 UBE2J2Q8N2K1 259 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 MEIOBQ8N635 442 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 ZNF511Q8NB15 262 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 OR2M3Q8NG83 312 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 OR10D3Q8NH80 312 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 TSEN15Q8WW01 171 aaKnown RBP4.17□□□□□ -1.74
EDEM3-203ENST00000439962 ASB5Q8WWX0 329 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 FAM3DQ96BQ1 224 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 ZBTB8AQ96BR9 441 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 WDYHV1Q96HA8 205 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 ARL5BQ96KC2 179 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 ELOVL3Q9HB03 270 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 TMEM165Q9HC07 324 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.17□□□□□ -1.74
EDEM3-203ENST00000439962 MRPL22Q9NWU5 206 aaKnown RBP4.17□□□□□ -1.74
EDEM3-203ENST00000439962 MGAT4CQ9UBM8 478 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 ANAPC10Q9UM13 185 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 HDGFL3Q9Y3E1 203 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 SLC22A20A6NK97 555 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 E9PLN8 166 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 WNT11O96014 354 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 CD8AP01732 235 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 F13BP05160 661 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 RPA2P15927 270 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 CCL1P22362 96 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 CBX5P45973 191 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 DSCR4P56555 118 aaPredicted RBP4.17□□□□□ -1.74
EDEM3-203ENST00000439962 ZP1P60852 638 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 EIF2B1Q14232 305 aaKnown RBP4.17□□□□□ -1.74
EDEM3-203ENST00000439962 MEP1BQ16820 701 aa4.17□□□□□ -1.74
EDEM3-203ENST00000439962 ACSF3Q4G176 576 aaPredicted RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms