RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 SOX7Q9BT81 388 aa13.37□□□□□ -0.27
SGCE-205ENST00000437425 MMP28Q9H239 520 aa13.37□□□□□ -0.27
SGCE-205ENST00000437425 AUNIPQ9H7T9 357 aa13.37□□□□□ -0.27
SGCE-205ENST00000437425 IGKV1-9A0A0C4DH69 117 aa13.36□□□□□ -0.27
SGCE-205ENST00000437425 K7ENP7 123 aa13.36□□□□□ -0.27
SGCE-205ENST00000437425 LPLP06858 475 aa13.36□□□□□ -0.27
SGCE-205ENST00000437425 TMIGD3P0DMS9 266 aaPredicted RBP13.36□□□□□ -0.27
SGCE-205ENST00000437425 VSIG8P0DPA2 414 aa13.36□□□□□ -0.27
SGCE-205ENST00000437425 PTGFRP43088 359 aa13.36□□□□□ -0.27
SGCE-205ENST00000437425 C9orf135Q5VTT2 229 aa13.36□□□□□ -0.27
SGCE-205ENST00000437425 INO80CQ6PI98 192 aaPredicted RBP13.36□□□□□ -0.27
SGCE-205ENST00000437425 GLIPR1L1Q6UWM5 242 aa13.36□□□□□ -0.27
SGCE-205ENST00000437425 LHFPL2Q6ZUX7 228 aa13.36□□□□□ -0.27
SGCE-205ENST00000437425 CACNG6Q9BXT2 260 aa13.36□□□□□ -0.27
SGCE-205ENST00000437425 PCDHB16Q9NRJ7 776 aa13.36□□□□□ -0.27
SGCE-205ENST00000437425 B3GNT2Q9NY97 397 aa13.36□□□□□ -0.27
SGCE-205ENST00000437425 SLC7A11Q9UPY5 501 aa13.36□□□□□ -0.27
SGCE-205ENST00000437425 ZNF816-ZNF321PA0A0X1KG74 233 aa13.35□□□□□ -0.27
SGCE-205ENST00000437425 MBD3L4A6NDZ8 208 aaPredicted RBP13.35□□□□□ -0.27
SGCE-205ENST00000437425 MBD3L3A6NE82 208 aaPredicted RBP13.35□□□□□ -0.27
SGCE-205ENST00000437425 MBD3L5A6NJ08 208 aaPredicted RBP13.35□□□□□ -0.27
SGCE-205ENST00000437425 FIGNL2A6NMB9 653 aa13.35□□□□□ -0.27
SGCE-205ENST00000437425 INMT-MINDY4F8WBC2 141 aa13.35□□□□□ -0.27
SGCE-205ENST00000437425 NAT2P11245 290 aa13.35□□□□□ -0.27
SGCE-205ENST00000437425 SRP9P49458 86 aaKnown RBP13.35□□□□□ -0.27
SGCE-205ENST00000437425 UBE2NP61088 152 aaKnown RBP13.35□□□□□ -0.27
SGCE-205ENST00000437425 FAM3AP98173 230 aa13.35□□□□□ -0.27
SGCE-205ENST00000437425 HGFACQ04756 655 aa13.35□□□□□ -0.27
SGCE-205ENST00000437425 PLA2G7Q13093 441 aa13.35□□□□□ -0.27
SGCE-205ENST00000437425 UBE2V2Q15819 145 aa13.35□□□□□ -0.27
SGCE-205ENST00000437425 TBRG1Q3YBR2 411 aa13.35□□□□□ -0.27
SGCE-205ENST00000437425 FAM180AQ6UWF9 173 aa13.35□□□□□ -0.27
SGCE-205ENST00000437425 CSNK2A3Q8NEV1 391 aa13.35□□□□□ -0.27
SGCE-205ENST00000437425 STEAP2Q8NFT2 490 aa13.35□□□□□ -0.27
SGCE-205ENST00000437425 MBD3L2Q8NHZ7 208 aaPredicted RBP13.35□□□□□ -0.27
SGCE-205ENST00000437425 GPX8Q8TED1 209 aa13.35□□□□□ -0.27
SGCE-205ENST00000437425 PIGTQ969N2 578 aa13.35□□□□□ -0.27
SGCE-205ENST00000437425 POM121L2Q96KW2 1035 aa13.35□□□□□ -0.27
SGCE-205ENST00000437425 MOV10Q9HCE1 1003 aaKnown RBP13.35□□□□□ -0.27
SGCE-205ENST00000437425 PLSCR4Q9NRQ2 329 aa13.35□□□□□ -0.27
SGCE-205ENST00000437425 KCNN3Q9UGI6 736 aa13.35□□□□□ -0.27
SGCE-205ENST00000437425 LOC100509620A0A075B734 347 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 C5orf49A4QMS7 147 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 C5orf63A6NC05 138 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 HMX3A6NHT5 357 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 GMDSO60547 372 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 ZNF780AO75290 641 aaPredicted RBP13.34□□□□□ -0.27
SGCE-205ENST00000437425 NRASP01111 189 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 TCRBP04435 133 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 MELTFP08582 738 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 FUT6P51993 359 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 RNASE12Q5GAN4 147 aaKnown RBP13.34□□□□□ -0.27
SGCE-205ENST00000437425 C1QTNF12Q5T7M4 302 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 BTN2A1Q7KYR7 527 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 C17orf78Q8N4C9 275 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 PAQR4Q8N4S7 273 aaPredicted RBP13.34□□□□□ -0.27
SGCE-205ENST00000437425 OR56B1Q8NGI3 324 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 OR5M9Q8NGP3 310 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 OR2AE1Q8NHA4 323 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 POM121Q96HA1 1249 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 REPIN1Q9BWE0 567 aaKnown RBP13.34□□□□□ -0.27
SGCE-205ENST00000437425 TMEM59Q9BXS4 323 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 HRASLSQ9HDD0 168 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 OBP2BQ9NPH6 170 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 KLK11Q9UBX7 282 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 LHX6Q9UPM6 363 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 CACNA1BQ00975 2339 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 TNRC6AQ8NDV7 1962 aaKnown RBP13.34□□□□□ -0.27
SGCE-205ENST00000437425 RAB27BO00194 218 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 KDM4BO94953 1096 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 GSTP1P09211 210 aaKnown RBP13.34□□□□□ -0.27
SGCE-205ENST00000437425 ANOS1P23352 680 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 HOXC12P31275 282 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 BTCP35070 178 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 KIR2DL2P43627 348 aaPredicted RBP13.34□□□□□ -0.27
SGCE-205ENST00000437425 RBP2P50120 134 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 FOXG1P55316 489 aaPredicted RBP13.34□□□□□ -0.27
SGCE-205ENST00000437425 ZNF92Q03936 586 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 UNC119Q13432 240 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 TATDN3Q17R31 274 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 TBC1D28Q2M2D7 210 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 RTL6Q6ICC9 239 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 C9orf106Q8NAJ2 232 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 OR10R2Q8NGX6 335 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 OR56B4Q8NH76 319 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 AQP3Q92482 292 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 HPS1Q92902 700 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 UPRTQ96BW1 309 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 BORCS8Q96FH0 119 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 CNTNAP3BQ96NU0 1288 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 CNTNAP3Q9BZ76 1288 aa13.34□□□□□ -0.27
SGCE-205ENST00000437425 CDC14BO60729 498 aa13.33□□□□□ -0.28
SGCE-205ENST00000437425 AKAIN1P0CW23 69 aa13.33□□□□□ -0.28
SGCE-205ENST00000437425 EDN3P14138 238 aa13.33□□□□□ -0.28
SGCE-205ENST00000437425 SPINK2P20155 84 aa13.33□□□□□ -0.28
SGCE-205ENST00000437425 COX5AP20674 150 aa13.33□□□□□ -0.28
SGCE-205ENST00000437425 ACKR3P25106 362 aa13.33□□□□□ -0.28
SGCE-205ENST00000437425 GIFP27352 417 aa13.33□□□□□ -0.28
SGCE-205ENST00000437425 RCVRNP35243 200 aa13.33□□□□□ -0.28
SGCE-205ENST00000437425 OR3A4PP47883 348 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms