RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 GPR31O00270 319 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 PLPP3O14495 311 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 MT-ATP6P00846 226 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 BGLAPP02818 100 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 CSTBP04080 98 aaKnown RBP7.18□□□□□ -1.26
HPS4-205ENST00000429411 HOXC4P09017 264 aaPredicted RBP7.18□□□□□ -1.26
HPS4-205ENST00000429411 SPINK2P20155 84 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 ZP3P21754 424 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 BLVRBP30043 206 aaPredicted RBP7.18□□□□□ -1.26
HPS4-205ENST00000429411 AKR1C3P42330 323 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 RPS27AP62979 156 aaKnown RBP7.18□□□□□ -1.26
HPS4-205ENST00000429411 UBA52P62987 128 aaKnown RBP7.18□□□□□ -1.26
HPS4-205ENST00000429411 SMCO1Q147U7 214 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 SPAG16Q8N0X2 631 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 BPIFCQ8NFQ6 507 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 OR1M1Q8NGA1 313 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 OR5T2Q8NGG2 359 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 OR1S2Q8NGQ3 325 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 ADAT3Q96EY9 351 aaPredicted RBP7.18□□□□□ -1.26
HPS4-205ENST00000429411 PBOV1Q9GZY1 135 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 ZNF768Q9H5H4 540 aaKnown RBP7.18□□□□□ -1.26
HPS4-205ENST00000429411 SLC22A11Q9NSA0 550 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 GDF2Q9UK05 429 aaPredicted RBP7.18□□□□□ -1.26
HPS4-205ENST00000429411 C2orf16Q68DN1 1984 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 A0A0D9SG52 128 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 MED19A0JLT2 244 aaPredicted RBP7.17□□□□□ -1.26
HPS4-205ENST00000429411 B4E171 279 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 J3QW42 95 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 ZNF354AO60765 605 aaPredicted RBP7.17□□□□□ -1.26
HPS4-205ENST00000429411 FLNBO75369 2602 aaKnown RBP7.17□□□□□ -1.26
HPS4-205ENST00000429411 MPLP40238 635 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 CLDN17P56750 224 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 ZNF616Q08AN1 781 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 MEF2DQ14814 521 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 PDCD1Q15116 288 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 RPUSD3Q6P087 351 aaKnown RBP7.17□□□□□ -1.26
HPS4-205ENST00000429411 BRICD5Q6PL45 260 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 CLEC9AQ6UXN8 241 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 OR2W3Q7Z3T1 314 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 SLC22A24Q8N4F4 322 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 TMEM156Q8N614 296 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 LIN37Q96GY3 246 aaPredicted RBP7.17□□□□□ -1.26
HPS4-205ENST00000429411 BCL2L14Q9BZR8 327 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 ZNF160Q9HCG1 818 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 PLEK2Q9NYT0 353 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 PCDHB10Q9UN67 800 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 VSIG4Q9Y279 399 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 B3GALT1Q9Y5Z6 326 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 PCDH15Q96QU1 1955 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 A6NIZ1 184 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 G3V3Q6 166 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 SOCS1O15524 211 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 ZNHIT1O43257 154 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 TLX3O43711 291 aaPredicted RBP7.17□□□□□ -1.26
HPS4-205ENST00000429411 EIF4E2O60573 245 aaKnown RBP7.17□□□□□ -1.26
HPS4-205ENST00000429411 OR2J2O76002 312 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 DDAH2O95865 285 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 RBMXP38159 391 aaKnown RBP7.17□□□□□ -1.26
HPS4-205ENST00000429411 OR3A4PP47883 348 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 RAP1BP61224 184 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 RAP1AP62834 184 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 C11orf87Q6NUJ2 197 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 TMEM71Q6P5X7 295 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 SYT13Q7L8C5 426 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 BVESQ8NE79 360 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 OR5M9Q8NGP3 310 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 OR1N1Q8NGS0 311 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 GPX8Q8TED1 209 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 ZNF721Q8TF20 911 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 SLC25A28Q96A46 364 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 URM1Q9BTM9 101 aaKnown RBP7.17□□□□□ -1.26
HPS4-205ENST00000429411 RAB22AQ9UL26 194 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 MMACHCQ9Y4U1 282 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 MYO7BQ6PIF6 2116 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 A0A1B0GX78 115 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 FAM74A7A6NL05 159 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 ZNF850A8MQ14 1090 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 PRSS44E7EML9 344 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 TRAPPC6AO75865 159 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 RBM39Q14498 530 aaKnown RBP7.17□□□□□ -1.26
HPS4-205ENST00000429411 FAM74A3Q4VXF1 159 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 ETFRF1Q6IPR1 90 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 RGS7BPQ6MZT1 257 aaPredicted RBP7.17□□□□□ -1.26
HPS4-205ENST00000429411 AKR7LQ8NHP1 331 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 STOML3Q8TAV4 291 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 CDC6Q99741 560 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 GAREM1Q9H706 876 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 LANCL2Q9NS86 450 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 C14orf166Q9Y224 244 aaKnown RBP7.17□□□□□ -1.26
HPS4-205ENST00000429411 FAM96BQ9Y3D0 163 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 KCNMB2Q9Y691 235 aa7.17□□□□□ -1.26
HPS4-205ENST00000429411 TRBV5-7A0A0A0MS05 114 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 OR2M5A3KFT3 312 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 M0R036 132 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 NUDT21O43809 227 aaKnown RBP7.16□□□□□ -1.26
HPS4-205ENST00000429411 SCRG1O75711 98 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 FCGR2AP12318 317 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 MGMTP16455 207 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 CSF2RBP32927 897 aa7.16□□□□□ -1.26
HPS4-205ENST00000429411 OPRM1P35372 400 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms