RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 NOP16Q9Y3C1 178 aaKnown RBP12.36□□□□□ -0.43
SGCE-204ENST00000428696 TPRKBQ9Y3C4 175 aa12.36□□□□□ -0.43
SGCE-204ENST00000428696 PCDHGB5Q9Y5G0 923 aa12.36□□□□□ -0.43
SGCE-204ENST00000428696 TRBV2A0A0J9YWF9 115 aa12.35□□□□□ -0.43
SGCE-204ENST00000428696 GMDSO60547 372 aa12.35□□□□□ -0.43
SGCE-204ENST00000428696 CSF3P09919 207 aa12.35□□□□□ -0.43
SGCE-204ENST00000428696 CD99P14209 185 aa12.35□□□□□ -0.43
SGCE-204ENST00000428696 FAHP16930 419 aa12.35□□□□□ -0.43
SGCE-204ENST00000428696 ACKR3P25106 362 aa12.35□□□□□ -0.43
SGCE-204ENST00000428696 C21orf33P30042 268 aaPredicted RBP12.35□□□□□ -0.43
SGCE-204ENST00000428696 CRYBB2P43320 205 aa12.35□□□□□ -0.43
SGCE-204ENST00000428696 GTF2A1P52655 376 aaPredicted RBP12.35□□□□□ -0.43
SGCE-204ENST00000428696 NANOS3P60323 173 aaKnown RBP12.35□□□□□ -0.43
SGCE-204ENST00000428696 PRDX4Q13162 271 aa12.35□□□□□ -0.43
SGCE-204ENST00000428696 MOGAT3Q86VF5 341 aa12.35□□□□□ -0.43
SGCE-204ENST00000428696 SYS1Q8N2H4 156 aa12.35□□□□□ -0.43
SGCE-204ENST00000428696 BOLLQ8N9W6 283 aaKnown RBP12.35□□□□□ -0.43
SGCE-204ENST00000428696 C10orf105Q8TEF2 133 aa12.35□□□□□ -0.43
SGCE-204ENST00000428696 MEGF10Q96KG7 1140 aa12.35□□□□□ -0.43
SGCE-204ENST00000428696 REG4Q9BYZ8 158 aa12.35□□□□□ -0.43
SGCE-204ENST00000428696 CHODLQ9H9P2 273 aa12.35□□□□□ -0.43
SGCE-204ENST00000428696 PLEKHA1Q9HB21 404 aa12.35□□□□□ -0.43
SGCE-204ENST00000428696 DLL4Q9NR61 685 aa12.35□□□□□ -0.43
SGCE-204ENST00000428696 ZNF275Q9NSD4 429 aaPredicted RBP12.35□□□□□ -0.43
SGCE-204ENST00000428696 ERVK-18Q9QC07 812 aa12.35□□□□□ -0.43
SGCE-204ENST00000428696 ERGIC3Q9Y282 383 aa12.35□□□□□ -0.43
SGCE-204ENST00000428696 CAB39Q9Y376 341 aaPredicted RBP12.35□□□□□ -0.43
SGCE-204ENST00000428696 ITPR3Q14573 2671 aa12.35□□□□□ -0.43
SGCE-204ENST00000428696 AKAP9Q99996 3911 aa12.34□□□□□ -0.43
SGCE-204ENST00000428696 A6NLC8 198 aa12.34□□□□□ -0.43
SGCE-204ENST00000428696 ANXA2P2A6NMY6 339 aa12.34□□□□□ -0.43
SGCE-204ENST00000428696 MYL12BO14950 172 aa12.34□□□□□ -0.43
SGCE-204ENST00000428696 PIPP12273 146 aaPredicted RBP12.34□□□□□ -0.43
SGCE-204ENST00000428696 KIR3DL2P43630 455 aa12.34□□□□□ -0.43
SGCE-204ENST00000428696 ALKBH1Q13686 389 aaKnown RBP12.34□□□□□ -0.43
SGCE-204ENST00000428696 CEP78Q5JTW2 689 aa12.34□□□□□ -0.43
SGCE-204ENST00000428696 AVPI1Q5T686 147 aa12.34□□□□□ -0.43
SGCE-204ENST00000428696 PRAMEF6Q5VXH4 476 aa12.34□□□□□ -0.43
SGCE-204ENST00000428696 SPNS3Q6ZMD2 512 aa12.34□□□□□ -0.43
SGCE-204ENST00000428696 DOK3Q7L591 496 aa12.34□□□□□ -0.43
SGCE-204ENST00000428696 CIARTQ8N365 385 aaPredicted RBP12.34□□□□□ -0.43
SGCE-204ENST00000428696 ZNF420Q8TAQ5 688 aaPredicted RBP12.34□□□□□ -0.43
SGCE-204ENST00000428696 SGCDQ92629 289 aa12.34□□□□□ -0.43
SGCE-204ENST00000428696 MICU1Q9BPX6 476 aa12.34□□□□□ -0.43
SGCE-204ENST00000428696 C14orf119Q9NWQ9 140 aa12.34□□□□□ -0.43
SGCE-204ENST00000428696 BABAM2Q9NXR7 383 aa12.34□□□□□ -0.43
SGCE-204ENST00000428696 ZNF816-ZNF321PA0A0X1KG74 233 aa12.33□□□□□ -0.44
SGCE-204ENST00000428696 A0A1B0GTI1 187 aa12.33□□□□□ -0.44
SGCE-204ENST00000428696 PNMA8CA0A1B0GUJ8 204 aa12.33□□□□□ -0.44
SGCE-204ENST00000428696 ISPDA4D126 451 aa12.33□□□□□ -0.44
SGCE-204ENST00000428696 CLDN25C9JDP6 229 aa12.33□□□□□ -0.44
SGCE-204ENST00000428696 DHRS3O75911 302 aa12.33□□□□□ -0.44
SGCE-204ENST00000428696 CDK1P06493 297 aa12.33□□□□□ -0.44
SGCE-204ENST00000428696 CD55P08174 381 aa12.33□□□□□ -0.44
SGCE-204ENST00000428696 ADH4P08319 380 aa12.33□□□□□ -0.44
SGCE-204ENST00000428696 UBCP0CG48 685 aaKnown RBP12.33□□□□□ -0.44
SGCE-204ENST00000428696 IRF2P14316 349 aa12.33□□□□□ -0.44
SGCE-204ENST00000428696 ACHEP22303 614 aa12.33□□□□□ -0.44
SGCE-204ENST00000428696 NR4A2P43354 598 aa12.33□□□□□ -0.44
SGCE-204ENST00000428696 GPR6P46095 362 aaPredicted RBP12.33□□□□□ -0.44
SGCE-204ENST00000428696 SLC3A1Q07837 685 aa12.33□□□□□ -0.44
SGCE-204ENST00000428696 MZT1Q08AG7 82 aa12.33□□□□□ -0.44
SGCE-204ENST00000428696 OR8B8Q15620 311 aa12.33□□□□□ -0.44
SGCE-204ENST00000428696 PEG10Q86TG7 708 aaKnown RBP12.33□□□□□ -0.44
SGCE-204ENST00000428696 ZFP41Q8N8Y5 198 aa12.33□□□□□ -0.44
SGCE-204ENST00000428696 OR5AK2Q8NH90 309 aa12.33□□□□□ -0.44
SGCE-204ENST00000428696 RNF170Q96K19 258 aa12.33□□□□□ -0.44
SGCE-204ENST00000428696 ZNF649Q9BS31 505 aa12.33□□□□□ -0.44
SGCE-204ENST00000428696 BPESC1Q9GZL8 116 aa12.33□□□□□ -0.44
SGCE-204ENST00000428696 COMMD4Q9H0A8 199 aa12.33□□□□□ -0.44
SGCE-204ENST00000428696 ENPP5Q9UJA9 477 aa12.33□□□□□ -0.44
SGCE-204ENST00000428696 LOC107986453A0A1B0GWG9 222 aa12.32□□□□□ -0.44
SGCE-204ENST00000428696 hCG_1807616A0A1W2PRN6 198 aa12.32□□□□□ -0.44
SGCE-204ENST00000428696 NDUFS8O00217 210 aa12.32□□□□□ -0.44
SGCE-204ENST00000428696 LMX1BO60663 402 aa12.32□□□□□ -0.44
SGCE-204ENST00000428696 ZNF205O95201 554 aa12.32□□□□□ -0.44
SGCE-204ENST00000428696 OCM2P0CE71 109 aa12.32□□□□□ -0.44
SGCE-204ENST00000428696 OCMP0CE72 109 aaPredicted RBP12.32□□□□□ -0.44
SGCE-204ENST00000428696 ATP6V1B1P15313 513 aa12.32□□□□□ -0.44
SGCE-204ENST00000428696 TMEM33P57088 247 aa12.32□□□□□ -0.44
SGCE-204ENST00000428696 MAB21L1Q13394 359 aa12.32□□□□□ -0.44
SGCE-204ENST00000428696 MPPED2Q15777 294 aa12.32□□□□□ -0.44
SGCE-204ENST00000428696 TMEM244Q5VVB8 128 aa12.32□□□□□ -0.44
SGCE-204ENST00000428696 PLCXD3Q63HM9 321 aa12.32□□□□□ -0.44
SGCE-204ENST00000428696 ZDHHC23Q8IYP9 409 aa12.32□□□□□ -0.44
SGCE-204ENST00000428696 SPERTQ8NA61 448 aa12.32□□□□□ -0.44
SGCE-204ENST00000428696 OR13C3Q8NGS6 347 aa12.32□□□□□ -0.44
SGCE-204ENST00000428696 OR11L1Q8NGX0 322 aa12.32□□□□□ -0.44
SGCE-204ENST00000428696 OR14K1Q8NGZ2 314 aa12.32□□□□□ -0.44
SGCE-204ENST00000428696 RAB1CQ92928 201 aa12.32□□□□□ -0.44
SGCE-204ENST00000428696 FGGYQ96C11 551 aa12.32□□□□□ -0.44
SGCE-204ENST00000428696 TIMD4Q96H15 378 aa12.32□□□□□ -0.44
SGCE-204ENST00000428696 PDCD1LG2Q9BQ51 273 aa12.32□□□□□ -0.44
SGCE-204ENST00000428696 JAM3Q9BX67 310 aa12.32□□□□□ -0.44
SGCE-204ENST00000428696 RASSF4Q9H2L5 321 aa12.32□□□□□ -0.44
SGCE-204ENST00000428696 GCM1Q9NP62 436 aa12.32□□□□□ -0.44
SGCE-204ENST00000428696 GPR173Q9NS66 373 aa12.32□□□□□ -0.44
SGCE-204ENST00000428696 PAK1IP1Q9NWT1 392 aaPredicted RBP12.32□□□□□ -0.44
SGCE-204ENST00000428696 C1orf123Q9NWV4 160 aa12.32□□□□□ -0.44
SGCE-204ENST00000428696 DCAF16Q9NXF7 216 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms