RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 SOX8P57073 446 aa9.08□□□□□ -0.96
HDAC9-210ENST00000428307 ACTBP60709 375 aa9.08□□□□□ -0.96
HDAC9-210ENST00000428307 PCBD1P61457 104 aa9.08□□□□□ -0.96
HDAC9-210ENST00000428307 ACTG1P63261 375 aa9.08□□□□□ -0.96
HDAC9-210ENST00000428307 ZNF260Q3ZCT1 412 aa9.08□□□□□ -0.96
HDAC9-210ENST00000428307 RAB12Q6IQ22 244 aa9.08□□□□□ -0.96
HDAC9-210ENST00000428307 NUFIP2Q7Z417 695 aaKnown RBP9.08□□□□□ -0.96
HDAC9-210ENST00000428307 GVQW1Q8N7I0 195 aa9.08□□□□□ -0.96
HDAC9-210ENST00000428307 CPEB3Q8NE35 698 aaKnown RBP9.08□□□□□ -0.96
HDAC9-210ENST00000428307 OR10K1Q8NGX5 313 aa9.08□□□□□ -0.96
HDAC9-210ENST00000428307 NUDCD2Q8WVJ2 157 aa9.08□□□□□ -0.96
HDAC9-210ENST00000428307 TINAGL1Q9GZM7 467 aaPredicted RBP9.08□□□□□ -0.96
HDAC9-210ENST00000428307 LPAR5Q9H1C0 372 aa9.08□□□□□ -0.96
HDAC9-210ENST00000428307 C12orf49Q9H741 205 aa9.08□□□□□ -0.96
HDAC9-210ENST00000428307 GPR173Q9NS66 373 aa9.08□□□□□ -0.96
HDAC9-210ENST00000428307 ZNF224Q9NZL3 707 aa9.08□□□□□ -0.96
HDAC9-210ENST00000428307 UPB1Q9UBR1 384 aa9.08□□□□□ -0.96
HDAC9-210ENST00000428307 KLK13Q9UKR3 277 aa9.08□□□□□ -0.96
HDAC9-210ENST00000428307 SOCS1O15524 211 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 RAB3DO95716 219 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 MMP7P09237 267 aaPredicted RBP9.07□□□□□ -0.96
HDAC9-210ENST00000428307 PTGFRP43088 359 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 BCL2A1Q16548 175 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 FGD2Q7Z6J4 655 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 FJX1Q86VR8 437 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 ZNF100Q8IYN0 542 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 PNLDC1Q8NA58 520 aaKnown RBP9.07□□□□□ -0.96
HDAC9-210ENST00000428307 SEMA6DQ8NFY4 1073 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 KCNG3Q8TAE7 436 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 PP6455Q8WZ26 134 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 AQP3Q92482 292 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 APH1AQ96BI3 265 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 CHST5Q9GZS9 411 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 SCPEP1Q9HB40 452 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 ELL3Q9HB65 397 aaPredicted RBP9.07□□□□□ -0.96
HDAC9-210ENST00000428307 SPRR3Q9UBC9 169 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 ING4Q9UNL4 249 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 A0A0A6YYD4 124 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 ZNF736B4DX44 427 aaPredicted RBP9.07□□□□□ -0.96
HDAC9-210ENST00000428307 ZNF587BE7ETH6 402 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 SULT1C2O00338 296 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 CDC14BO60729 498 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 ACTL6AO96019 429 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 THBS4P35443 961 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 GZMKP49863 264 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 TAS2R19P59542 299 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 RBMS2Q15434 407 aaKnown RBP9.07□□□□□ -0.96
HDAC9-210ENST00000428307 NKPD1Q17RQ9 610 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 DEFB109BQ30KR1 87 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 CD276Q5ZPR3 534 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 OR52W1Q6IF63 320 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 CRIP3Q6Q6R5 217 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 TRAPPC6BQ86SZ2 158 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 ZNF584Q8IVC4 421 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 OR10R2Q8NGX6 335 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 SSC4DQ8WTU2 575 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 TNFAIP8L1Q8WVP5 186 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 TMEM59Q9BXS4 323 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 BCO1Q9HAY6 547 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 ZNF69Q9UC07 566 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 KIAA1549Q9HCM3 1950 aa9.07□□□□□ -0.96
HDAC9-210ENST00000428307 FAM230AA0A1W2PPH8 454 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 PLATP00750 562 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 C1QBP02746 253 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 AMY2AP04746 511 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 PRF1P14222 555 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 ZNF92Q03936 586 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 TNK1Q13470 666 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 SCGB2B2Q4G0G5 96 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 Q5BKY6 102 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 PLAC9Q5JTB6 97 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 METTL11BQ5VVY1 283 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 CD163Q86VB7 1156 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 NAXEQ8NCW5 288 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 OR52B4Q8NGK2 314 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 WDYHV1Q96HA8 205 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 S100A13Q99584 98 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 TMEM246Q9BRR3 403 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 MGAQ8IWI9 3026 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 LOC100509620A0A075B734 347 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 A0A1B0GUH1 482 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 ZNF503-AS2A6NEH8 195 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 ZNF724A8MTY0 619 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 PRAF2O60831 178 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 CD79AP11912 226 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 SERPINA2P20848 420 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 ERP29P30040 261 aaKnown RBP9.06□□□□□ -0.96
HDAC9-210ENST00000428307 MTCP1P56278 107 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 SNRPD2P62316 118 aaKnown RBP9.06□□□□□ -0.96
HDAC9-210ENST00000428307 RIPPLY1Q0D2K3 151 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 RNPS1Q15287 305 aaKnown RBP9.06□□□□□ -0.96
HDAC9-210ENST00000428307 GLDNQ6ZMI3 551 aaPredicted RBP9.06□□□□□ -0.96
HDAC9-210ENST00000428307 IDO2Q6ZQW0 420 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 CDH26Q8IXH8 852 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 TMEM229BQ8NBD8 167 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 RAB3CQ96E17 227 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 LINC00470Q9BZP3 86 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 CHST6Q9GZX3 395 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 ZDHHC11Q9H8X9 412 aa9.06□□□□□ -0.96
HDAC9-210ENST00000428307 PRSS50Q9UI38 385 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms