RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 PLSCR4Q9NRQ2 329 aa18.19■□□□□ 0.5
GPC1-202ENST00000420138 PIEZO2Q9H5I5 2752 aa18.18■□□□□ 0.5
GPC1-202ENST00000420138 CIB4A0PJX0 185 aa18.18■□□□□ 0.5
GPC1-202ENST00000420138 CGAP01215 116 aa18.18■□□□□ 0.5
GPC1-202ENST00000420138 ALDOBP05062 364 aa18.18■□□□□ 0.5
GPC1-202ENST00000420138 DMRTC1Q5HYR2 192 aa18.18■□□□□ 0.5
GPC1-202ENST00000420138 TMEM53Q6P2H8 277 aa18.18■□□□□ 0.5
GPC1-202ENST00000420138 UTS2BQ765I0 119 aa18.18■□□□□ 0.5
GPC1-202ENST00000420138 DPPA2Q7Z7J5 298 aa18.18■□□□□ 0.5
GPC1-202ENST00000420138 RPRMLQ8N4K4 120 aa18.18■□□□□ 0.5
GPC1-202ENST00000420138 PP6455Q8WZ26 134 aa18.18■□□□□ 0.5
GPC1-202ENST00000420138 SPSB4Q96A44 273 aa18.18■□□□□ 0.5
GPC1-202ENST00000420138 PRORYQ9H606 182 aa18.18■□□□□ 0.5
GPC1-202ENST00000420138 NEK6Q9HC98 313 aa18.18■□□□□ 0.5
GPC1-202ENST00000420138 POU2F3Q9UKI9 436 aa18.18■□□□□ 0.5
GPC1-202ENST00000420138 hCG_38984A0A1B0GV85 526 aa18.17■□□□□ 0.5
GPC1-202ENST00000420138 C5orf49A4QMS7 147 aa18.17■□□□□ 0.5
GPC1-202ENST00000420138 ALX3O95076 343 aa18.17■□□□□ 0.5
GPC1-202ENST00000420138 TPOP07202 933 aa18.17■□□□□ 0.5
GPC1-202ENST00000420138 ERCC1P07992 297 aaPredicted RBP18.17■□□□□ 0.5
GPC1-202ENST00000420138 PRF1P14222 555 aa18.17■□□□□ 0.5
GPC1-202ENST00000420138 GABRA1P14867 456 aa18.17■□□□□ 0.5
GPC1-202ENST00000420138 COX5AP20674 150 aa18.17■□□□□ 0.5
GPC1-202ENST00000420138 BTCP35070 178 aa18.17■□□□□ 0.5
GPC1-202ENST00000420138 ZNF93P35789 620 aaPredicted RBP18.17■□□□□ 0.5
GPC1-202ENST00000420138 PRSS12P56730 875 aa18.17■□□□□ 0.5
GPC1-202ENST00000420138 QRFPP83859 136 aa18.17■□□□□ 0.5
GPC1-202ENST00000420138 FAM3AP98173 230 aa18.17■□□□□ 0.5
GPC1-202ENST00000420138 CDH26Q8IXH8 852 aa18.17■□□□□ 0.5
GPC1-202ENST00000420138 CISD2Q8N5K1 135 aaKnown RBP18.17■□□□□ 0.5
GPC1-202ENST00000420138 SEMA6DQ8NFY4 1073 aa18.17■□□□□ 0.5
GPC1-202ENST00000420138 STARD4Q96DR4 205 aa18.17■□□□□ 0.5
GPC1-202ENST00000420138 DPAGT1Q9H3H5 408 aa18.17■□□□□ 0.5
GPC1-202ENST00000420138 RGCCQ9H4X1 137 aa18.17■□□□□ 0.5
GPC1-202ENST00000420138 ZNF391Q9UJN7 358 aa18.17■□□□□ 0.5
GPC1-202ENST00000420138 WDR1O75083 606 aa18.16■□□□□ 0.5
GPC1-202ENST00000420138 LYZL6O75951 148 aa18.16■□□□□ 0.5
GPC1-202ENST00000420138 TPPPO94811 219 aa18.16■□□□□ 0.5
GPC1-202ENST00000420138 KDM4BO94953 1096 aa18.16■□□□□ 0.5
GPC1-202ENST00000420138 TAS2R20P59543 309 aa18.16■□□□□ 0.5
GPC1-202ENST00000420138 DYRK1AQ13627 763 aa18.16■□□□□ 0.5
GPC1-202ENST00000420138 GABRA6Q16445 453 aa18.16■□□□□ 0.5
GPC1-202ENST00000420138 GSG1Q2KHT4 349 aa18.16■□□□□ 0.5
GPC1-202ENST00000420138 OR10K2Q6IF99 312 aa18.16■□□□□ 0.5
GPC1-202ENST00000420138 MDP1Q86V88 176 aa18.16■□□□□ 0.5
GPC1-202ENST00000420138 CD163Q86VB7 1156 aa18.16■□□□□ 0.5
GPC1-202ENST00000420138 GABRG1Q8N1C3 465 aa18.16■□□□□ 0.5
GPC1-202ENST00000420138 PAQR4Q8N4S7 273 aaPredicted RBP18.16■□□□□ 0.5
GPC1-202ENST00000420138 C15orf40Q8WUR7 153 aa18.16■□□□□ 0.5
GPC1-202ENST00000420138 GCDHQ92947 438 aaPredicted RBP18.16■□□□□ 0.5
GPC1-202ENST00000420138 MS4A3Q96HJ5 214 aa18.16■□□□□ 0.5
GPC1-202ENST00000420138 BOD1Q96IK1 185 aa18.16■□□□□ 0.5
GPC1-202ENST00000420138 ZZEF1O43149 2961 aa18.16■□□□□ 0.5
GPC1-202ENST00000420138 GABARAPH6UMI1 98 aa18.16■□□□□ 0.5
GPC1-202ENST00000420138 XRCC3O43542 346 aa18.16■□□□□ 0.5
GPC1-202ENST00000420138 NKX2-5P52952 324 aaPredicted RBP18.16■□□□□ 0.5
GPC1-202ENST00000420138 MRPS10P82664 201 aaKnown RBP18.16■□□□□ 0.5
GPC1-202ENST00000420138 KLF9Q13886 244 aaPredicted RBP18.16■□□□□ 0.5
GPC1-202ENST00000420138 TMEM69Q5SWH9 247 aa18.16■□□□□ 0.5
GPC1-202ENST00000420138 NAXEQ8NCW5 288 aa18.16■□□□□ 0.5
GPC1-202ENST00000420138 C1orf147Q96MC9 270 aaPredicted RBP18.16■□□□□ 0.5
GPC1-202ENST00000420138 AUNIPQ9H7T9 357 aa18.16■□□□□ 0.5
GPC1-202ENST00000420138 A8MV72 311 aaPredicted RBP18.15■□□□□ 0.5
GPC1-202ENST00000420138 RAD51DO75771 328 aa18.15■□□□□ 0.5
GPC1-202ENST00000420138 PTHLHP12272 177 aa18.15■□□□□ 0.5
GPC1-202ENST00000420138 PTGER4P35408 488 aa18.15■□□□□ 0.5
GPC1-202ENST00000420138 GDNFP39905 211 aa18.15■□□□□ 0.5
GPC1-202ENST00000420138 GSK3AP49840 483 aa18.15■□□□□ 0.5
GPC1-202ENST00000420138 SF3B4Q15427 424 aaKnown RBP eCLIP18.15■□□□□ 0.5
GPC1-202ENST00000420138 OR8B8Q15620 311 aa18.15■□□□□ 0.5
GPC1-202ENST00000420138 C1orf185Q5T7R7 199 aa18.15■□□□□ 0.5
GPC1-202ENST00000420138 TMEM42Q69YG0 159 aa18.15■□□□□ 0.5
GPC1-202ENST00000420138 MTFR2Q6P444 385 aa18.15■□□□□ 0.5
GPC1-202ENST00000420138 FAM57AQ8TBR7 257 aa18.15■□□□□ 0.5
GPC1-202ENST00000420138 PTX4Q96A99 478 aa18.15■□□□□ 0.5
GPC1-202ENST00000420138 COPZ2Q9P299 210 aa18.15■□□□□ 0.5
GPC1-202ENST00000420138 MYEF2Q9P2K5 600 aaKnown RBP18.15■□□□□ 0.5
GPC1-202ENST00000420138 NUBP2Q9Y5Y2 271 aa18.15■□□□□ 0.5
GPC1-202ENST00000420138 DOCK7Q96N67 2140 aa18.15■□□□□ 0.5
GPC1-202ENST00000420138 DSPP15924 2871 aaKnown RBP18.14■□□□□ 0.5
GPC1-202ENST00000420138 GGT3PA6NGU5 568 aa18.14■□□□□ 0.5
GPC1-202ENST00000420138 XRCC2O43543 280 aa18.14■□□□□ 0.5
GPC1-202ENST00000420138 CCNOP22674 350 aa18.14■□□□□ 0.5
GPC1-202ENST00000420138 TGFBR3Q03167 851 aa18.14■□□□□ 0.5
GPC1-202ENST00000420138 RIPPLY1Q0D2K3 151 aa18.14■□□□□ 0.5
GPC1-202ENST00000420138 UNC119Q13432 240 aa18.14■□□□□ 0.5
GPC1-202ENST00000420138 TSC22D1Q15714 1073 aa18.14■□□□□ 0.5
GPC1-202ENST00000420138 ZFP69Q49AA0 526 aa18.14■□□□□ 0.5
GPC1-202ENST00000420138 DNM1P46Q6ZS02 220 aa18.14■□□□□ 0.5
GPC1-202ENST00000420138 ANGPTL5Q86XS5 388 aa18.14■□□□□ 0.5
GPC1-202ENST00000420138 NANOS1Q8WY41 292 aaKnown RBP18.14■□□□□ 0.5
GPC1-202ENST00000420138 BPNT1O95861 308 aa18.14■□□□□ 0.49
GPC1-202ENST00000420138 ECDO95905 644 aaPredicted RBP18.14■□□□□ 0.49
GPC1-202ENST00000420138 SERPINA5P05154 406 aa18.14■□□□□ 0.49
GPC1-202ENST00000420138 HCKP08631 526 aa18.14■□□□□ 0.49
GPC1-202ENST00000420138 VSIG8P0DPA2 414 aa18.14■□□□□ 0.49
GPC1-202ENST00000420138 OR3A4PP47883 348 aa18.14■□□□□ 0.49
GPC1-202ENST00000420138 PLP2Q04941 152 aa18.14■□□□□ 0.49
GPC1-202ENST00000420138 SNTB2Q13425 540 aaKnown RBP18.14■□□□□ 0.49
GPC1-202ENST00000420138 ZNF610Q8N9Z0 462 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms