RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 SEH1LQ96EE3 360 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 LYZL4Q96KX0 146 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 TBX15Q96SF7 602 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 TLNRD1Q9H1K6 362 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 RASSF4Q9H2L5 321 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 KAAG1Q9UBP8 84 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 DNAJB9Q9UBS3 223 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 DUX4Q9UBX2 424 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 RHBDD3Q9Y3P4 386 aa9.15□□□□□ -0.94
SSBP3-206ENST00000420121 IGHV3OR15-7A0A075B7D8 119 aa9.14□□□□□ -0.95
SSBP3-206ENST00000420121 CCDC182A6NF36 153 aa9.14□□□□□ -0.95
SSBP3-206ENST00000420121 A6NLC8 198 aa9.14□□□□□ -0.95
SSBP3-206ENST00000420121 ANKRD30BLA7E2S9 258 aa9.14□□□□□ -0.95
SSBP3-206ENST00000420121 GNGT2O14610 69 aa9.14□□□□□ -0.95
SSBP3-206ENST00000420121 GYG2O15488 501 aa9.14□□□□□ -0.95
SSBP3-206ENST00000420121 ADAM20O43506 726 aa9.14□□□□□ -0.95
SSBP3-206ENST00000420121 ENSAO43768 121 aaKnown RBP9.14□□□□□ -0.95
SSBP3-206ENST00000420121 APOC1P02654 83 aa9.14□□□□□ -0.95
SSBP3-206ENST00000420121 GYPAP02724 150 aa9.14□□□□□ -0.95
SSBP3-206ENST00000420121 HMGN1P05114 100 aa9.14□□□□□ -0.95
SSBP3-206ENST00000420121 SFTPBP07988 381 aa9.14□□□□□ -0.95
SSBP3-206ENST00000420121 H2BFMP0C1H6 154 aa9.14□□□□□ -0.95
SSBP3-206ENST00000420121 ANXA8P13928 327 aa9.14□□□□□ -0.95
SSBP3-206ENST00000420121 HOXB6P17509 224 aaKnown RBP9.14□□□□□ -0.95
SSBP3-206ENST00000420121 PAICSP22234 425 aaKnown RBP9.14□□□□□ -0.95
SSBP3-206ENST00000420121 CFHR2P36980 270 aa9.14□□□□□ -0.95
SSBP3-206ENST00000420121 NAA10P41227 235 aaPredicted RBP9.14□□□□□ -0.95
SSBP3-206ENST00000420121 HCCSP53701 268 aa9.14□□□□□ -0.95
SSBP3-206ENST00000420121 POU4F2Q12837 409 aa9.14□□□□□ -0.95
SSBP3-206ENST00000420121 BAMBIQ13145 260 aa9.14□□□□□ -0.95
SSBP3-206ENST00000420121 SLC35D3Q5M8T2 416 aa9.14□□□□□ -0.95
SSBP3-206ENST00000420121 FAHD1Q6P587 224 aa9.14□□□□□ -0.95
SSBP3-206ENST00000420121 BRD3OSQ6XYD6 125 aa9.14□□□□□ -0.95
SSBP3-206ENST00000420121 OR8B12Q8NGG6 310 aa9.14□□□□□ -0.95
SSBP3-206ENST00000420121 BCAS4Q8TDM0 211 aa9.14□□□□□ -0.95
SSBP3-206ENST00000420121 TECTBQ96PL2 329 aa9.14□□□□□ -0.95
SSBP3-206ENST00000420121 CADM1Q9BY67 442 aaKnown RBP9.14□□□□□ -0.95
SSBP3-206ENST00000420121 MS4A7Q9GZW8 240 aaPredicted RBP9.14□□□□□ -0.95
SSBP3-206ENST00000420121 SIRPDQ9H106 197 aa9.14□□□□□ -0.95
SSBP3-206ENST00000420121 OR10A2Q9H208 303 aa9.14□□□□□ -0.95
SSBP3-206ENST00000420121 MMADHCQ9H3L0 296 aaPredicted RBP9.14□□□□□ -0.95
SSBP3-206ENST00000420121 RNPEPL1Q9HAU8 725 aa9.14□□□□□ -0.95
SSBP3-206ENST00000420121 BRD7Q9NPI1 651 aa9.14□□□□□ -0.95
SSBP3-206ENST00000420121 C14orf119Q9NWQ9 140 aa9.14□□□□□ -0.95
SSBP3-206ENST00000420121 MEGF8Q7Z7M0 2845 aa9.14□□□□□ -0.95
SSBP3-206ENST00000420121 TRAV38-1A0A0B4J264 116 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.13□□□□□ -0.95
SSBP3-206ENST00000420121 hCG_1807616A0A1W2PRN6 198 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 SRRM5B3KS81 715 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 ZNF879B4DU55 563 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 DVL1O14640 695 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 GSC2O15499 205 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 NDUFA2O43678 99 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 E2F6O75461 281 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 TIPRLO75663 272 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 DNAJC8O75937 253 aaPredicted RBP9.13□□□□□ -0.95
SSBP3-206ENST00000420121 IGLV3-1P01715 115 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 CFL1P23528 166 aaKnown RBP9.13□□□□□ -0.95
SSBP3-206ENST00000420121 DCTDP32321 178 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 DAPP51397 102 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 CRISP1P54107 249 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 PSMA6P60900 246 aaKnown RBP9.13□□□□□ -0.95
SSBP3-206ENST00000420121 EFNB1P98172 346 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 APOFQ13790 326 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 KCNJ8Q15842 424 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 DEFB112Q30KQ8 113 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 GFOD2Q3B7J2 385 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 RUSC1-AS1Q66K80 236 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 RBMS3Q6XE24 437 aaKnown RBP9.13□□□□□ -0.95
SSBP3-206ENST00000420121 KRT74Q7RTS7 529 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 GALNT4Q8N4A0 578 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 C3orf56Q8N813 242 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 CSNK2A3Q8NEV1 391 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 OR8S1Q8NH09 359 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 THEM6Q8WUY1 208 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 LRRC29Q8WV35 223 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 HPSE2Q8WWQ2 592 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 PGAM5Q96HS1 289 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 RGCCQ9H4X1 137 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 SP140LQ9H930 580 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 ZMAT3Q9HA38 289 aaKnown RBP9.13□□□□□ -0.95
SSBP3-206ENST00000420121 TRIM36Q9NQ86 728 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 ERVK-18Q9QC07 812 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 COPS3Q9UNS2 423 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 LRP12Q9Y561 859 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 CMYA5Q8N3K9 4069 aa9.13□□□□□ -0.95
SSBP3-206ENST00000420121 CENPVL3A0A0U1RRI6 287 aa9.12□□□□□ -0.95
SSBP3-206ENST00000420121 CDIPTO14735 213 aa9.12□□□□□ -0.95
SSBP3-206ENST00000420121 CST4P01036 141 aa9.12□□□□□ -0.95
SSBP3-206ENST00000420121 EPHA2P29317 976 aa9.12□□□□□ -0.95
SSBP3-206ENST00000420121 MZT1Q08AG7 82 aa9.12□□□□□ -0.95
SSBP3-206ENST00000420121 BNIP1Q12981 228 aa9.12□□□□□ -0.95
SSBP3-206ENST00000420121 PRDX4Q13162 271 aa9.12□□□□□ -0.95
SSBP3-206ENST00000420121 FAM76BQ5HYJ3 339 aa9.12□□□□□ -0.95
SSBP3-206ENST00000420121 WDR38Q5JTN6 314 aa9.12□□□□□ -0.95
SSBP3-206ENST00000420121 CD276Q5ZPR3 534 aa9.12□□□□□ -0.95
SSBP3-206ENST00000420121 BTN2A1Q7KYR7 527 aa9.12□□□□□ -0.95
SSBP3-206ENST00000420121 OR5P3Q8WZ94 311 aa9.12□□□□□ -0.95
SSBP3-206ENST00000420121 NRBF2Q96F24 287 aa9.12□□□□□ -0.95
SSBP3-206ENST00000420121 WDFY2Q96P53 400 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms