RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 APOBEC3DQ96AK3 386 aaPredicted RBP5.85□□□□□ -1.47
HMGN1-205ENST00000419378 R3HDM4Q96D70 268 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 CMBLQ96DG6 245 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 MSI2Q96DH6 328 aaKnown RBP5.85□□□□□ -1.47
HMGN1-205ENST00000419378 ELMOD3Q96FG2 381 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 PITX2Q99697 317 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 HCAR1Q9BXC0 346 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 NARFLQ9H6Q4 476 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 WDR76Q9H967 626 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 ZNF556Q9HAH1 456 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 NTN4Q9HB63 628 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 CACNG2Q9Y698 323 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 TANC2Q9HCD6 1990 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 MXRA5Q9NR99 2828 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 F5H5K5 113 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 M0R135 149 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 WNT9BO14905 357 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 TGFAP01135 160 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 PAICSP22234 425 aaKnown RBP5.84□□□□□ -1.47
HMGN1-205ENST00000419378 IGFBP5P24593 272 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 FMO3P31513 532 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 ENTPD1P49961 510 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 BLVRAP53004 296 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 CDH15P55291 814 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 TMEM33P57088 247 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 TNFAIP6P98066 277 aaPredicted RBP5.84□□□□□ -1.47
HMGN1-205ENST00000419378 FHL3Q13643 280 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 GINS1Q14691 196 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 ATP6AP1Q15904 470 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 PCK2Q16822 640 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 HFEQ30201 348 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 SPRNQ5BIV9 151 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 AVPI1Q5T686 147 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 IGFL4Q6B9Z1 124 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 FAM166AQ6J272 317 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 ACSM5Q6NUN0 579 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 FAHD1Q6P587 224 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 FBXW12Q6X9E4 464 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 DCXRQ7Z4W1 244 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 HIPK1Q86Z02 1210 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 OR5AS1Q8N127 324 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 OR2Z1Q8NG97 314 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 OR5L1Q8NGL2 311 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 ST7LQ8TDW4 575 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 PTP4A1Q93096 173 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 SPTSSAQ969W0 71 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 OTULINQ96BN8 352 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 HAVCR1Q96D42 359 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 NRBF2Q96F24 287 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 ZNF799Q96GE5 643 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 C1QTNF5Q9BXJ0 243 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 EGLN1Q9GZT9 426 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 MMADHCQ9H3L0 296 aaPredicted RBP5.84□□□□□ -1.47
HMGN1-205ENST00000419378 MED20Q9H944 212 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 SLC25A19Q9HC21 320 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 DDX28Q9NUL7 540 aaKnown RBP5.84□□□□□ -1.47
HMGN1-205ENST00000419378 TMEM160Q9NX00 188 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 KIF17Q9P2E2 1029 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 KCNS2Q9ULS6 477 aa5.84□□□□□ -1.47
HMGN1-205ENST00000419378 IQCF6A8MYZ5 107 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 FAM157AC9JC47 383 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 CLDN25C9JDP6 229 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 ZNF878C9JN71 531 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 PRR23D1E9PI22 279 aaPredicted RBP5.83□□□□□ -1.48
HMGN1-205ENST00000419378 ZNF593O00488 134 aaPredicted RBP5.83□□□□□ -1.48
HMGN1-205ENST00000419378 SURF4O15260 269 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 LMX1BO60663 402 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 GLCEO94923 617 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 LCATP04180 440 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 IL6RP08887 468 aaPredicted RBP5.83□□□□□ -1.48
HMGN1-205ENST00000419378 PRR23D2P0DMB1 279 aaPredicted RBP5.83□□□□□ -1.48
HMGN1-205ENST00000419378 ANOS1P23352 680 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 OTX1P32242 354 aaPredicted RBP5.83□□□□□ -1.48
HMGN1-205ENST00000419378 TPTEP56180 551 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 TIRAPP58753 221 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 CDK5Q00535 292 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 HNRNPA0Q13151 305 aaKnown RBP5.83□□□□□ -1.48
HMGN1-205ENST00000419378 GK2Q14410 553 aaPredicted RBP5.83□□□□□ -1.48
HMGN1-205ENST00000419378 SNAI3Q3KNW1 292 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 CHRFAM7AQ494W8 412 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 C4orf46Q504U0 113 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 TEX30Q5JUR7 227 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 OR2T2Q6IF00 324 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 LIN54Q6MZP7 749 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 PLBD1Q6P4A8 553 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 Q6ZNX1 250 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 ASRGL1Q7L266 308 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 NAA40Q86UY6 237 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 ERI1Q8IV48 349 aaKnown RBP5.83□□□□□ -1.48
HMGN1-205ENST00000419378 PARP8Q8N3A8 854 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 BHLHE23Q8NDY6 225 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 OR8G5Q8NG78 346 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 OR10AD1Q8NGE0 317 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 ABHD5Q8WTS1 349 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 ITLN1Q8WWA0 313 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 DNAJC9Q8WXX5 260 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 CCL17Q92583 94 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 SLAMF6Q96DU3 332 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 DUS3LQ96G46 650 aaKnown RBP5.83□□□□□ -1.48
HMGN1-205ENST00000419378 TIMD4Q96H15 378 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms