RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 MAPK1IP1LQ8NDC0 245 aa19.53■□□□□ 0.72
SMARCB1-205ENST00000417137 HAVCR2Q8TDQ0 301 aa19.53■□□□□ 0.72
SMARCB1-205ENST00000417137 TMEM80Q96HE8 168 aa19.53■□□□□ 0.72
SMARCB1-205ENST00000417137 PLCXD1Q9NUJ7 323 aa19.53■□□□□ 0.72
SMARCB1-205ENST00000417137 SLC22A13Q9Y226 551 aa19.53■□□□□ 0.72
SMARCB1-205ENST00000417137 RHBDD3Q9Y3P4 386 aa19.53■□□□□ 0.72
SMARCB1-205ENST00000417137 CACNG2Q9Y698 323 aa19.53■□□□□ 0.72
SMARCB1-205ENST00000417137 ZNF816-ZNF321PA0A0X1KG74 233 aa19.52■□□□□ 0.72
SMARCB1-205ENST00000417137 LRRC30A6NM36 301 aa19.52■□□□□ 0.72
SMARCB1-205ENST00000417137 DHRS3O75911 302 aa19.52■□□□□ 0.72
SMARCB1-205ENST00000417137 HTR1AP08908 422 aa19.52■□□□□ 0.72
SMARCB1-205ENST00000417137 MYL12AP19105 171 aa19.52■□□□□ 0.72
SMARCB1-205ENST00000417137 ACKR3P25106 362 aa19.52■□□□□ 0.72
SMARCB1-205ENST00000417137 PSMB10P40306 273 aa19.52■□□□□ 0.72
SMARCB1-205ENST00000417137 VHLP40337 213 aa19.52■□□□□ 0.72
SMARCB1-205ENST00000417137 GATA4P43694 442 aa19.52■□□□□ 0.72
SMARCB1-205ENST00000417137 MAB21L1Q13394 359 aa19.52■□□□□ 0.72
SMARCB1-205ENST00000417137 FDX2Q6P4F2 183 aa19.52■□□□□ 0.72
SMARCB1-205ENST00000417137 TMPRSS11AQ6ZMR5 421 aa19.52■□□□□ 0.72
SMARCB1-205ENST00000417137 DOK3Q7L591 496 aa19.52■□□□□ 0.72
SMARCB1-205ENST00000417137 CCDC54Q8NEL0 328 aa19.52■□□□□ 0.72
SMARCB1-205ENST00000417137 PIGCQ92535 297 aa19.52■□□□□ 0.72
SMARCB1-205ENST00000417137 HIST1H2AAQ96QV6 131 aa19.52■□□□□ 0.72
SMARCB1-205ENST00000417137 MICU1Q9BPX6 476 aa19.52■□□□□ 0.72
SMARCB1-205ENST00000417137 CNOT2Q9NZN8 540 aaKnown RBP19.52■□□□□ 0.72
SMARCB1-205ENST00000417137 DIMT1Q9UNQ2 313 aaKnown RBP19.52■□□□□ 0.72
SMARCB1-205ENST00000417137 EXOSC1Q9Y3B2 195 aaKnown RBP19.52■□□□□ 0.72
SMARCB1-205ENST00000417137 MAP1AP78559 2803 aaPredicted RBP19.52■□□□□ 0.71
SMARCB1-205ENST00000417137 IGHV4-61A0A0C4DH41 118 aa19.51■□□□□ 0.71
SMARCB1-205ENST00000417137 A0A1B0GVI7 797 aa19.51■□□□□ 0.71
SMARCB1-205ENST00000417137 P2RY10O00398 339 aa19.51■□□□□ 0.71
SMARCB1-205ENST00000417137 HEXAP06865 529 aa19.51■□□□□ 0.71
SMARCB1-205ENST00000417137 PIPP12273 146 aaPredicted RBP19.51■□□□□ 0.71
SMARCB1-205ENST00000417137 IRF2P14316 349 aa19.51■□□□□ 0.71
SMARCB1-205ENST00000417137 MOGAT3Q86VF5 341 aa19.51■□□□□ 0.71
SMARCB1-205ENST00000417137 BPIFB6Q8NFQ5 453 aa19.51■□□□□ 0.71
SMARCB1-205ENST00000417137 OR11L1Q8NGX0 322 aa19.51■□□□□ 0.71
SMARCB1-205ENST00000417137 OR2G2Q8NGZ5 317 aa19.51■□□□□ 0.71
SMARCB1-205ENST00000417137 GGHQ92820 318 aa19.51■□□□□ 0.71
SMARCB1-205ENST00000417137 HPS1Q92902 700 aa19.51■□□□□ 0.71
SMARCB1-205ENST00000417137 PELI1Q96FA3 418 aa19.51■□□□□ 0.71
SMARCB1-205ENST00000417137 SOX7Q9BT81 388 aa19.51■□□□□ 0.71
SMARCB1-205ENST00000417137 FN3KRPQ9HA64 309 aa19.51■□□□□ 0.71
SMARCB1-205ENST00000417137 ENPP5Q9UJA9 477 aa19.51■□□□□ 0.71
SMARCB1-205ENST00000417137 DHRS7CA6NNS2 312 aa19.5■□□□□ 0.71
SMARCB1-205ENST00000417137 UBCP0CG48 685 aaKnown RBP19.5■□□□□ 0.71
SMARCB1-205ENST00000417137 ZNF12P17014 697 aa19.5■□□□□ 0.71
SMARCB1-205ENST00000417137 CCR9P51686 369 aa19.5■□□□□ 0.71
SMARCB1-205ENST00000417137 GBX2P52951 348 aaPredicted RBP19.5■□□□□ 0.71
SMARCB1-205ENST00000417137 MVKQ03426 396 aa19.5■□□□□ 0.71
SMARCB1-205ENST00000417137 PRDX4Q13162 271 aa19.5■□□□□ 0.71
SMARCB1-205ENST00000417137 ODF4Q2M2E3 257 aa19.5■□□□□ 0.71
SMARCB1-205ENST00000417137 ZNF181Q2M3W8 571 aa19.5■□□□□ 0.71
SMARCB1-205ENST00000417137 WDR38Q5JTN6 314 aa19.5■□□□□ 0.71
SMARCB1-205ENST00000417137 CLEC9AQ6UXN8 241 aa19.5■□□□□ 0.71
SMARCB1-205ENST00000417137 KRT74Q7RTS7 529 aa19.5■□□□□ 0.71
SMARCB1-205ENST00000417137 C1orf87Q8N0U7 546 aa19.5■□□□□ 0.71
SMARCB1-205ENST00000417137 ZNF649Q9BS31 505 aa19.5■□□□□ 0.71
SMARCB1-205ENST00000417137 PIGLQ9Y2B2 252 aa19.5■□□□□ 0.71
SMARCB1-205ENST00000417137 CAB39Q9Y376 341 aaPredicted RBP19.5■□□□□ 0.71
SMARCB1-205ENST00000417137 WIPI2Q9Y4P8 454 aa19.5■□□□□ 0.71
SMARCB1-205ENST00000417137 NPTNQ9Y639 398 aa19.5■□□□□ 0.71
SMARCB1-205ENST00000417137 IGHV3-64DA0A0J9YX35 117 aa19.49■□□□□ 0.71
SMARCB1-205ENST00000417137 A0A1B0GTI1 187 aa19.49■□□□□ 0.71
SMARCB1-205ENST00000417137 ZNF850A8MQ14 1090 aa19.49■□□□□ 0.71
SMARCB1-205ENST00000417137 SYT7O43581 403 aa19.49■□□□□ 0.71
SMARCB1-205ENST00000417137 PTBP3O95758 552 aaKnown RBP19.49■□□□□ 0.71
SMARCB1-205ENST00000417137 RPSAP08865 295 aaKnown RBP19.49■□□□□ 0.71
SMARCB1-205ENST00000417137 LIMS3P0CW19 117 aa19.49■□□□□ 0.71
SMARCB1-205ENST00000417137 LIMS4P0CW20 117 aa19.49■□□□□ 0.71
SMARCB1-205ENST00000417137 CCL1P22362 96 aa19.49■□□□□ 0.71
SMARCB1-205ENST00000417137 MYF6P23409 242 aa19.49■□□□□ 0.71
SMARCB1-205ENST00000417137 ST3GAL4Q11206 333 aa19.49■□□□□ 0.71
SMARCB1-205ENST00000417137 TMEM249Q2WGJ8 235 aa19.49■□□□□ 0.71
SMARCB1-205ENST00000417137 C6orf141Q5SZD1 244 aa19.49■□□□□ 0.71
SMARCB1-205ENST00000417137 TMEM244Q5VVB8 128 aa19.49■□□□□ 0.71
SMARCB1-205ENST00000417137 PRSS35Q8N3Z0 413 aa19.49■□□□□ 0.71
SMARCB1-205ENST00000417137 STX19Q8N4C7 294 aa19.49■□□□□ 0.71
SMARCB1-205ENST00000417137 KLHL36Q8N4N3 616 aa19.49■□□□□ 0.71
SMARCB1-205ENST00000417137 Q8TCH9 128 aa19.49■□□□□ 0.71
SMARCB1-205ENST00000417137 DVL3Q92997 716 aaPredicted RBP19.49■□□□□ 0.71
SMARCB1-205ENST00000417137 POM121Q96HA1 1249 aa19.49■□□□□ 0.71
SMARCB1-205ENST00000417137 RTL8AQ9BWD3 113 aa19.49■□□□□ 0.71
SMARCB1-205ENST00000417137 ANKRD60Q9BZ19 345 aa19.49■□□□□ 0.71
SMARCB1-205ENST00000417137 ISG20L2Q9H9L3 353 aaKnown RBP19.49■□□□□ 0.71
SMARCB1-205ENST00000417137 SCN3BQ9NY72 215 aa19.49■□□□□ 0.71
SMARCB1-205ENST00000417137 FRRS1LQ9P0K9 344 aa19.49■□□□□ 0.71
SMARCB1-205ENST00000417137 PSORS1C1Q9UIG5 152 aa19.49■□□□□ 0.71
SMARCB1-205ENST00000417137 V9GYS6 101 aa19.49■□□□□ 0.71
SMARCB1-205ENST00000417137 LOC100289279A0A1B0GTE1 492 aa19.48■□□□□ 0.71
SMARCB1-205ENST00000417137 TMEM178BH3BS89 294 aa19.48■□□□□ 0.71
SMARCB1-205ENST00000417137 XPNPEP2O43895 674 aa19.48■□□□□ 0.71
SMARCB1-205ENST00000417137 GRPP07492 148 aa19.48■□□□□ 0.71
SMARCB1-205ENST00000417137 ETV1P50549 477 aa19.48■□□□□ 0.71
SMARCB1-205ENST00000417137 CDH15P55291 814 aa19.48■□□□□ 0.71
SMARCB1-205ENST00000417137 AVPI1Q5T686 147 aa19.48■□□□□ 0.71
SMARCB1-205ENST00000417137 LAIR2Q6ISS4 152 aa19.48■□□□□ 0.71
SMARCB1-205ENST00000417137 Q6ZSR3 168 aa19.48■□□□□ 0.71
SMARCB1-205ENST00000417137 ZDHHC23Q8IYP9 409 aa19.48■□□□□ 0.71
SMARCB1-205ENST00000417137 OR14K1Q8NGZ2 314 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms