RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 OR6K6Q8NGW6 343 aa12.19□□□□□ -0.46
RPS28-201ENST00000417088 REEP6Q96HR9 211 aa12.19□□□□□ -0.46
RPS28-201ENST00000417088 FAM107BQ9H098 131 aa12.19□□□□□ -0.46
RPS28-201ENST00000417088 SEMA6AQ9H2E6 1030 aa12.19□□□□□ -0.46
RPS28-201ENST00000417088 DPAGT1Q9H3H5 408 aa12.19□□□□□ -0.46
RPS28-201ENST00000417088 TOR3AQ9H497 397 aa12.19□□□□□ -0.46
RPS28-201ENST00000417088 ONECUT1Q9UBC0 465 aa12.19□□□□□ -0.46
RPS28-201ENST00000417088 ACOT8O14734 319 aa12.18□□□□□ -0.46
RPS28-201ENST00000417088 TIPRLO75663 272 aa12.18□□□□□ -0.46
RPS28-201ENST00000417088 SOX14O95416 240 aa12.18□□□□□ -0.46
RPS28-201ENST00000417088 NAA10P41227 235 aaPredicted RBP12.18□□□□□ -0.46
RPS28-201ENST00000417088 MAGEA2P43356 314 aa12.18□□□□□ -0.46
RPS28-201ENST00000417088 TGM4P49221 684 aa12.18□□□□□ -0.46
RPS28-201ENST00000417088 GSK3AP49840 483 aa12.18□□□□□ -0.46
RPS28-201ENST00000417088 TAF9Q16594 264 aa12.18□□□□□ -0.46
RPS28-201ENST00000417088 TIGD6Q17RP2 521 aa12.18□□□□□ -0.46
RPS28-201ENST00000417088 METAP1DQ6UB28 335 aaPredicted RBP12.18□□□□□ -0.46
RPS28-201ENST00000417088 CYP2R1Q6VVX0 501 aa12.18□□□□□ -0.46
RPS28-201ENST00000417088 Q6ZSV7 163 aa12.18□□□□□ -0.46
RPS28-201ENST00000417088 FAM57BQ71RH2 274 aa12.18□□□□□ -0.46
RPS28-201ENST00000417088 SLC36A1Q7Z2H8 476 aa12.18□□□□□ -0.46
RPS28-201ENST00000417088 AQP11Q8NBQ7 271 aa12.18□□□□□ -0.46
RPS28-201ENST00000417088 OR2T33Q8NG76 320 aa12.18□□□□□ -0.46
RPS28-201ENST00000417088 RNF133Q8WVZ7 376 aa12.18□□□□□ -0.46
RPS28-201ENST00000417088 C12orf43Q96C57 262 aaKnown RBP12.18□□□□□ -0.46
RPS28-201ENST00000417088 DMRTB1Q96MA1 342 aa12.18□□□□□ -0.46
RPS28-201ENST00000417088 ABHD6Q9BV23 337 aa12.18□□□□□ -0.46
RPS28-201ENST00000417088 TLNRD1Q9H1K6 362 aa12.18□□□□□ -0.46
RPS28-201ENST00000417088 SP140LQ9H930 580 aa12.18□□□□□ -0.46
RPS28-201ENST00000417088 SIRT7Q9NRC8 400 aa12.18□□□□□ -0.46
RPS28-201ENST00000417088 ARL8BQ9NVJ2 186 aa12.18□□□□□ -0.46
RPS28-201ENST00000417088 ARMC1Q9NVT9 282 aa12.18□□□□□ -0.46
RPS28-201ENST00000417088 ZNF319Q9P2F9 582 aa12.18□□□□□ -0.46
RPS28-201ENST00000417088 TAGLN3Q9UI15 199 aa12.18□□□□□ -0.46
RPS28-201ENST00000417088 BAIAP2Q9UQB8 552 aa12.18□□□□□ -0.46
RPS28-201ENST00000417088 FAM96BQ9Y3D0 163 aa12.18□□□□□ -0.46
RPS28-201ENST00000417088 RHBDD3Q9Y3P4 386 aa12.18□□□□□ -0.46
RPS28-201ENST00000417088 RNASEK-C17orf49H0YIS7 233 aa12.17□□□□□ -0.46
RPS28-201ENST00000417088 CDIPTO14735 213 aa12.17□□□□□ -0.46
RPS28-201ENST00000417088 NDUFB3O43676 98 aa12.17□□□□□ -0.46
RPS28-201ENST00000417088 ATP6V1B2P21281 511 aa12.17□□□□□ -0.46
RPS28-201ENST00000417088 HSD11B1P28845 292 aa12.17□□□□□ -0.46
RPS28-201ENST00000417088 BLVRAP53004 296 aa12.17□□□□□ -0.46
RPS28-201ENST00000417088 ZNF121P58317 390 aaPredicted RBP12.17□□□□□ -0.46
RPS28-201ENST00000417088 PRB3Q04118 309 aaPredicted RBP12.17□□□□□ -0.46
RPS28-201ENST00000417088 IKZF1Q13422 519 aa12.17□□□□□ -0.46
RPS28-201ENST00000417088 SPATS1Q496A3 300 aa12.17□□□□□ -0.46
RPS28-201ENST00000417088 ATPAF1Q5TC12 328 aaPredicted RBP12.17□□□□□ -0.46
RPS28-201ENST00000417088 STUMQ69YW2 141 aa12.17□□□□□ -0.46
RPS28-201ENST00000417088 GDPGP1Q6ZNW5 385 aa12.17□□□□□ -0.46
RPS28-201ENST00000417088 DEFB107AQ8IZN7 70 aa12.17□□□□□ -0.46
RPS28-201ENST00000417088 GALNT4Q8N4A0 578 aa12.17□□□□□ -0.46
RPS28-201ENST00000417088 Q8N7P7 452 aa12.17□□□□□ -0.46
RPS28-201ENST00000417088 OR5T2Q8NGG2 359 aa12.17□□□□□ -0.46
RPS28-201ENST00000417088 OR52H1Q8NGJ2 320 aa12.17□□□□□ -0.46
RPS28-201ENST00000417088 OR6N2Q8NGY6 317 aa12.17□□□□□ -0.46
RPS28-201ENST00000417088 NPRL2Q8WTW4 380 aa12.17□□□□□ -0.46
RPS28-201ENST00000417088 LRTOMTQ8WZ04 291 aa12.17□□□□□ -0.46
RPS28-201ENST00000417088 AMELYQ99218 206 aa12.17□□□□□ -0.46
RPS28-201ENST00000417088 DCTN5Q9BTE1 182 aa12.17□□□□□ -0.46
RPS28-201ENST00000417088 DGCR6LQ9BY27 220 aa12.17□□□□□ -0.46
RPS28-201ENST00000417088 C16orf95Q9H693 158 aa12.17□□□□□ -0.46
RPS28-201ENST00000417088 TCF7L1Q9HCS4 588 aa12.17□□□□□ -0.46
RPS28-201ENST00000417088 VNN3Q9NY84 501 aa12.17□□□□□ -0.46
RPS28-201ENST00000417088 DNAJC27Q9NZQ0 273 aa12.17□□□□□ -0.46
RPS28-201ENST00000417088 ZNRD1Q9P1U0 126 aa12.17□□□□□ -0.46
RPS28-201ENST00000417088 ACTR3BQ9P1U1 418 aa12.17□□□□□ -0.46
RPS28-201ENST00000417088 PRPF19Q9UMS4 504 aaKnown RBP12.17□□□□□ -0.46
RPS28-201ENST00000417088 CAB39Q9Y376 341 aaPredicted RBP12.17□□□□□ -0.46
RPS28-201ENST00000417088 FAM183AA6NL82 134 aa12.16□□□□□ -0.46
RPS28-201ENST00000417088 GPR37O15354 613 aa12.16□□□□□ -0.46
RPS28-201ENST00000417088 IFNGP01579 166 aa12.16□□□□□ -0.46
RPS28-201ENST00000417088 APOC1P02654 83 aa12.16□□□□□ -0.46
RPS28-201ENST00000417088 FBP1P09467 338 aa12.16□□□□□ -0.46
RPS28-201ENST00000417088 SELLP14151 372 aa12.16□□□□□ -0.46
RPS28-201ENST00000417088 CFL1P23528 166 aaKnown RBP12.16□□□□□ -0.46
RPS28-201ENST00000417088 GNALP38405 381 aa12.16□□□□□ -0.46
RPS28-201ENST00000417088 DLX1P56177 255 aa12.16□□□□□ -0.46
RPS28-201ENST00000417088 GFOD2Q3B7J2 385 aa12.16□□□□□ -0.46
RPS28-201ENST00000417088 C16orf89Q6UX73 402 aa12.16□□□□□ -0.46
RPS28-201ENST00000417088 ERI1Q8IV48 349 aaKnown RBP12.16□□□□□ -0.46
RPS28-201ENST00000417088 CMTM4Q8IZR5 234 aa12.16□□□□□ -0.46
RPS28-201ENST00000417088 CSNK2A3Q8NEV1 391 aa12.16□□□□□ -0.46
RPS28-201ENST00000417088 C8orf46Q8TAG6 207 aa12.16□□□□□ -0.46
RPS28-201ENST00000417088 TNFRSF14Q92956 283 aa12.16□□□□□ -0.46
RPS28-201ENST00000417088 UBE2FQ969M7 185 aa12.16□□□□□ -0.46
RPS28-201ENST00000417088 ITPKCQ96DU7 683 aa12.16□□□□□ -0.46
RPS28-201ENST00000417088 INTS14Q96SY0 518 aa12.16□□□□□ -0.46
RPS28-201ENST00000417088 MICU1Q9BPX6 476 aa12.16□□□□□ -0.46
RPS28-201ENST00000417088 PAPOLGQ9BWT3 736 aaKnown RBP12.16□□□□□ -0.46
RPS28-201ENST00000417088 WDR13Q9H1Z4 485 aa12.16□□□□□ -0.46
RPS28-201ENST00000417088 OR10A2Q9H208 303 aa12.16□□□□□ -0.46
RPS28-201ENST00000417088 MED20Q9H944 212 aa12.16□□□□□ -0.46
RPS28-201ENST00000417088 BRD7Q9NPI1 651 aa12.16□□□□□ -0.46
RPS28-201ENST00000417088 CMC2Q9NRP2 79 aa12.16□□□□□ -0.46
RPS28-201ENST00000417088 HAO2Q9NYQ3 351 aa12.16□□□□□ -0.46
RPS28-201ENST00000417088 DNAJB11Q9UBS4 358 aa12.16□□□□□ -0.46
RPS28-201ENST00000417088 A0A0G2JK05 382 aa12.15□□□□□ -0.46
RPS28-201ENST00000417088 A0A1W2PRD5 423 aa12.15□□□□□ -0.46
RPS28-201ENST00000417088 A0A1W2PRF3 423 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms