RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 FABP7O15540 132 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 SNNO75324 88 aaPredicted RBP7.58□□□□□ -1.2
SCN9A-203ENST00000409672 ABLIM3O94929 683 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 SLC25A5P05141 298 aaKnown RBP7.58□□□□□ -1.2
SCN9A-203ENST00000409672 PPP1CAP62136 330 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 NSUN5P2Q63ZY6 315 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 AP5S1Q9NUS5 200 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 UGT2A1Q9Y4X1 527 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 ALG1L2C9J202 215 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 K7ESF4 209 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 OR4A8P0C604 315 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 ZNF17P17021 662 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 HRH1P35367 487 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 CAPZBP47756 277 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 REG1BP48304 166 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 KIAA1024LP59773 190 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 Q499Y3 187 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 ZNF628Q5EBL2 1059 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 TMEM99Q8N816 258 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 ZNF436Q9C0F3 470 aaPredicted RBP7.58□□□□□ -1.2
SCN9A-203ENST00000409672 LYRM4Q9HD34 91 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 FBXO34Q9NWN3 711 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 PF4V1P10720 104 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 CCL4P13236 92 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 RAB5CP51148 216 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 RPS27AP62979 156 aaKnown RBP7.58□□□□□ -1.2
SCN9A-203ENST00000409672 UBA52P62987 128 aaKnown RBP7.58□□□□□ -1.2
SCN9A-203ENST00000409672 FZD5Q13467 585 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 XKR7Q5GH72 579 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 TMEM92Q6UXU6 159 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 MORN4Q8NDC4 146 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 OR8B3Q8NGG8 313 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 OR8B2Q96RD0 313 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 ATOH8Q96SQ7 321 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 PLEKHB1Q9UF11 243 aaPredicted RBP7.58□□□□□ -1.2
SCN9A-203ENST00000409672 HOXC11O43248 304 aaPredicted RBP7.58□□□□□ -1.2
SCN9A-203ENST00000409672 HBE1P02100 147 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 ANKRD53Q8N9V6 530 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 CLDN23Q96B33 292 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 MYEOVQ96EZ4 313 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 SIRT5Q9NXA8 310 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 OR5V1Q9UGF6 321 aa7.58□□□□□ -1.2
SCN9A-203ENST00000409672 XKRY2A2RUG3 117 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 OR6C68A6NDL8 312 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 GYPAP02724 150 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 HTR1FP30939 366 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 MLLT11Q13015 90 aaPredicted RBP7.57□□□□□ -1.2
SCN9A-203ENST00000409672 RRN3P1Q2M238 152 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 LIN7CQ9NUP9 197 aaKnown RBP7.57□□□□□ -1.2
SCN9A-203ENST00000409672 SERGEFQ9UGK8 458 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 TCFL5Q9UL49 500 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 SULT1C4O75897 302 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 FOXL2P58012 376 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 SPCS2Q15005 226 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 SYT14P1Q58G82 188 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 LIPNQ5VXI9 398 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 TAAR6Q96RI8 345 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 CLEC18AA5D8T8 446 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 CLEC2LP0C7M8 214 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 ZBTB25P24278 435 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 PPP1CBP62140 327 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 C5orf46Q6UWT4 87 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 ANKRD33Q7Z3H0 272 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 TCTE3Q8IZS6 198 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 CLEC18CQ8NCF0 446 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 OR5R1Q8NH85 324 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 MRGPRDQ8TDS7 321 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 KCNMB2Q9Y691 235 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 METTL12A8MUP2 240 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 H0YIV9 168 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 LRP3O75074 770 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 MT-ATP6P00846 226 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 SP6Q3SY56 376 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 TRNP1Q6NT89 227 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 TMEM171Q8WVE6 324 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 RNF167Q9H6Y7 350 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 DOCK2Q92608 1830 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 H0YIG0 161 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 HMGA1P17096 107 aaKnown RBP7.57□□□□□ -1.2
SCN9A-203ENST00000409672 FAM219BQ5XKK7 198 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 SLC24A4Q8NFF2 622 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 NUDCD2Q8WVJ2 157 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 ADAMTS14Q8WXS8 1223 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 STRAPQ9Y3F4 350 aaKnown RBP7.57□□□□□ -1.2
SCN9A-203ENST00000409672 HSPE1-MOB4S4R3N1 261 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 DUS4LO95620 317 aaKnown RBP7.57□□□□□ -1.2
SCN9A-203ENST00000409672 PRRX1P54821 245 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 ZNF266Q14584 549 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 CLEC2AQ6UVW9 174 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 OR2M3Q8NG83 312 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 DTD1Q8TEA8 209 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 TTC9Q92623 222 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 YIPF5Q969M3 257 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 INPP5EQ9NRR6 644 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 IL36GQ9NZH8 169 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 HEATR5BQ9P2D3 2071 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 SNAPINO95295 136 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 GALNSP34059 522 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 OXA1LQ15070 435 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 SOHLH1Q5JUK2 328 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms