RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 ESM1Q9NQ30 184 aa16.33■□□□□ 0.2
TSPAN4-209ENST00000409543 KRT84Q9NSB2 600 aa16.33■□□□□ 0.2
TSPAN4-209ENST00000409543 ERVK-18Q9QC07 812 aa16.33■□□□□ 0.2
TSPAN4-209ENST00000409543 CTSZQ9UBR2 303 aa16.33■□□□□ 0.2
TSPAN4-209ENST00000409543 LRP12Q9Y561 859 aa16.33■□□□□ 0.2
TSPAN4-209ENST00000409543 AP4S1Q9Y587 144 aa16.33■□□□□ 0.2
TSPAN4-209ENST00000409543 hCG_1807616A0A1W2PRN6 198 aa16.32■□□□□ 0.2
TSPAN4-209ENST00000409543 PRKYO43930 277 aa16.32■□□□□ 0.2
TSPAN4-209ENST00000409543 IL5RAQ01344 420 aa16.32■□□□□ 0.2
TSPAN4-209ENST00000409543 TEX36Q5VZQ5 186 aa16.32■□□□□ 0.2
TSPAN4-209ENST00000409543 CD276Q5ZPR3 534 aa16.32■□□□□ 0.2
TSPAN4-209ENST00000409543 DOK3Q7L591 496 aa16.32■□□□□ 0.2
TSPAN4-209ENST00000409543 ZDHHC13Q8IUH4 622 aa16.32■□□□□ 0.2
TSPAN4-209ENST00000409543 GALNT4Q8N4A0 578 aa16.32■□□□□ 0.2
TSPAN4-209ENST00000409543 PPP1R3EQ9H7J1 279 aa16.32■□□□□ 0.2
TSPAN4-209ENST00000409543 ABCB9Q9NP78 766 aa16.32■□□□□ 0.2
TSPAN4-209ENST00000409543 MPC1Q9Y5U8 109 aa16.32■□□□□ 0.2
TSPAN4-209ENST00000409543 ANK2Q01484 3957 aa16.31■□□□□ 0.2
TSPAN4-209ENST00000409543 ACOD1A6NK06 481 aa16.31■□□□□ 0.2
TSPAN4-209ENST00000409543 ADAM20O43506 726 aa16.31■□□□□ 0.2
TSPAN4-209ENST00000409543 MITFO75030 526 aaPredicted RBP16.31■□□□□ 0.2
TSPAN4-209ENST00000409543 CST4P01036 141 aa16.31■□□□□ 0.2
TSPAN4-209ENST00000409543 FCGR1AP12314 374 aa16.31■□□□□ 0.2
TSPAN4-209ENST00000409543 ACKR3P25106 362 aa16.31■□□□□ 0.2
TSPAN4-209ENST00000409543 ACTG1P63261 375 aa16.31■□□□□ 0.2
TSPAN4-209ENST00000409543 EFNB1P98172 346 aa16.31■□□□□ 0.2
TSPAN4-209ENST00000409543 SLX4IPQ5VYV7 408 aa16.31■□□□□ 0.2
TSPAN4-209ENST00000409543 KDM4DQ6B0I6 523 aa16.31■□□□□ 0.2
TSPAN4-209ENST00000409543 C12orf54Q6X4T0 127 aa16.31■□□□□ 0.2
TSPAN4-209ENST00000409543 FAM90A1Q86YD7 464 aa16.31■□□□□ 0.2
TSPAN4-209ENST00000409543 BCL6BQ8N143 479 aaPredicted RBP16.31■□□□□ 0.2
TSPAN4-209ENST00000409543 SIGLECL1Q8N7X8 197 aa16.31■□□□□ 0.2
TSPAN4-209ENST00000409543 OR8B12Q8NGG6 310 aa16.31■□□□□ 0.2
TSPAN4-209ENST00000409543 ITPKCQ96DU7 683 aa16.31■□□□□ 0.2
TSPAN4-209ENST00000409543 LYZL4Q96KX0 146 aa16.31■□□□□ 0.2
TSPAN4-209ENST00000409543 TECTBQ96PL2 329 aa16.31■□□□□ 0.2
TSPAN4-209ENST00000409543 MICU1Q9BPX6 476 aa16.31■□□□□ 0.2
TSPAN4-209ENST00000409543 MS4A7Q9GZW8 240 aaPredicted RBP16.31■□□□□ 0.2
TSPAN4-209ENST00000409543 GABARAPL1Q9H0R8 117 aa16.31■□□□□ 0.2
TSPAN4-209ENST00000409543 TLNRD1Q9H1K6 362 aa16.31■□□□□ 0.2
TSPAN4-209ENST00000409543 TMEM14AQ9Y6G1 99 aa16.31■□□□□ 0.2
TSPAN4-209ENST00000409543 TENM1Q9UKZ4 2725 aa16.31■□□□□ 0.2
TSPAN4-209ENST00000409543 TMEM89A2RUT3 159 aa16.3■□□□□ 0.2
TSPAN4-209ENST00000409543 ANXA2P2A6NMY6 339 aa16.3■□□□□ 0.2
TSPAN4-209ENST00000409543 ZAR1LA6NP61 321 aa16.3■□□□□ 0.2
TSPAN4-209ENST00000409543 C22orf46C9J442 243 aa16.3■□□□□ 0.2
TSPAN4-209ENST00000409543 ENSAO43768 121 aaKnown RBP16.3■□□□□ 0.2
TSPAN4-209ENST00000409543 ZNF254O75437 659 aa16.3■□□□□ 0.2
TSPAN4-209ENST00000409543 GYPAP02724 150 aa16.3■□□□□ 0.2
TSPAN4-209ENST00000409543 MRPL3P09001 348 aaKnown RBP16.3■□□□□ 0.2
TSPAN4-209ENST00000409543 IGHV4-38-2P0DP08 117 aa16.3■□□□□ 0.2
TSPAN4-209ENST00000409543 EGR1P18146 543 aa16.3■□□□□ 0.2
TSPAN4-209ENST00000409543 DCTDP32321 178 aa16.3■□□□□ 0.2
TSPAN4-209ENST00000409543 CFHR2P36980 270 aa16.3■□□□□ 0.2
TSPAN4-209ENST00000409543 COMPP49747 757 aaPredicted RBP16.3■□□□□ 0.2
TSPAN4-209ENST00000409543 UBA52P62987 128 aaKnown RBP16.3■□□□□ 0.2
TSPAN4-209ENST00000409543 ROM1Q03395 351 aa16.3■□□□□ 0.2
TSPAN4-209ENST00000409543 C12orf73Q69YU5 71 aa16.3■□□□□ 0.2
TSPAN4-209ENST00000409543 WDR82Q6UXN9 313 aa16.3■□□□□ 0.2
TSPAN4-209ENST00000409543 C9orf139Q6ZV77 190 aa16.3■□□□□ 0.2
TSPAN4-209ENST00000409543 MEPCEQ7L2J0 689 aaKnown RBP16.3■□□□□ 0.2
TSPAN4-209ENST00000409543 AMIGO2Q86SJ2 522 aa16.3■□□□□ 0.2
TSPAN4-209ENST00000409543 LRRC29Q8WV35 223 aa16.3■□□□□ 0.2
TSPAN4-209ENST00000409543 ASB17Q8WXJ9 295 aa16.3■□□□□ 0.2
TSPAN4-209ENST00000409543 ITFG2Q969R8 447 aa16.3■□□□□ 0.2
TSPAN4-209ENST00000409543 MROQ9BYG7 248 aa16.3■□□□□ 0.2
TSPAN4-209ENST00000409543 KAAG1Q9UBP8 84 aa16.3■□□□□ 0.2
TSPAN4-209ENST00000409543 TMEM269A0A1B0GVZ9 245 aa16.29■□□□□ 0.2
TSPAN4-209ENST00000409543 HAX1O00165 279 aa16.29■□□□□ 0.2
TSPAN4-209ENST00000409543 PLATP00750 562 aa16.29■□□□□ 0.2
TSPAN4-209ENST00000409543 LIPFP07098 398 aa16.29■□□□□ 0.2
TSPAN4-209ENST00000409543 MUC1P15941 1255 aaPredicted RBP16.29■□□□□ 0.2
TSPAN4-209ENST00000409543 EPHA2P29317 976 aa16.29■□□□□ 0.2
TSPAN4-209ENST00000409543 CSNK2BP67870 215 aa16.29■□□□□ 0.2
TSPAN4-209ENST00000409543 PRDX4Q13162 271 aa16.29■□□□□ 0.2
TSPAN4-209ENST00000409543 C11orf91Q3C1V1 193 aa16.29■□□□□ 0.2
TSPAN4-209ENST00000409543 AADACL4Q5VUY2 407 aa16.29■□□□□ 0.2
TSPAN4-209ENST00000409543 KRT74Q7RTS7 529 aa16.29■□□□□ 0.2
TSPAN4-209ENST00000409543 ZNF679Q8IYX0 411 aa16.29■□□□□ 0.2
TSPAN4-209ENST00000409543 TCEANCQ8N8B7 351 aa16.29■□□□□ 0.2
TSPAN4-209ENST00000409543 LRTOMTQ8WZ04 291 aa16.29■□□□□ 0.2
TSPAN4-209ENST00000409543 OR5P3Q8WZ94 311 aa16.29■□□□□ 0.2
TSPAN4-209ENST00000409543 GCDHQ92947 438 aaPredicted RBP16.29■□□□□ 0.2
TSPAN4-209ENST00000409543 OR8B4Q96RC9 309 aa16.29■□□□□ 0.2
TSPAN4-209ENST00000409543 CNN2Q99439 309 aaKnown RBP16.29■□□□□ 0.2
TSPAN4-209ENST00000409543 RTL8AQ9BWD3 113 aa16.29■□□□□ 0.2
TSPAN4-209ENST00000409543 FAM206AQ9NX38 181 aa16.29■□□□□ 0.2
TSPAN4-209ENST00000409543 H2AFY2Q9P0M6 372 aaPredicted RBP16.29■□□□□ 0.2
TSPAN4-209ENST00000409543 ENOPH1Q9UHY7 261 aa16.29■□□□□ 0.2
TSPAN4-209ENST00000409543 IGHV3OR15-7A0A075B7D8 119 aa16.28■□□□□ 0.2
TSPAN4-209ENST00000409543 A0A0U1RQV5 110 aa16.28■□□□□ 0.2
TSPAN4-209ENST00000409543 SLC22A31A6NKX4 558 aa16.28■□□□□ 0.2
TSPAN4-209ENST00000409543 TMEM210A6NLX4 147 aa16.28■□□□□ 0.2
TSPAN4-209ENST00000409543 ZNF850A8MQ14 1090 aa16.28■□□□□ 0.2
TSPAN4-209ENST00000409543 PSMD9O00233 223 aa16.28■□□□□ 0.2
TSPAN4-209ENST00000409543 FGF12P61328 243 aa16.28■□□□□ 0.2
TSPAN4-209ENST00000409543 MICBQ29980 383 aa16.28■□□□□ 0.2
TSPAN4-209ENST00000409543 NXNL2Q5VZ03 156 aa16.28■□□□□ 0.2
TSPAN4-209ENST00000409543 TMEM163Q8TC26 289 aa16.28■□□□□ 0.2
TSPAN4-209ENST00000409543 ZNF48Q96MX3 618 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms