RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 AVL9Q8NBF6 648 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 OR9K2Q8NGE7 335 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 OR1J1Q8NGS3 322 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 NUDT16L1Q9BRJ7 211 aaKnown RBP13.71□□□□□ -0.21
LIMS2-205ENST00000409455 SPACA1Q9HBV2 294 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 STARD10Q9Y365 291 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 CEP192Q8TEP8 1941 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 CEACAM18A8MTB9 384 aa13.7□□□□□ -0.22
LIMS2-205ENST00000409455 K7EPK0 472 aa13.7□□□□□ -0.22
LIMS2-205ENST00000409455 PI3P19957 117 aa13.7□□□□□ -0.22
LIMS2-205ENST00000409455 HSD11B1P28845 292 aa13.7□□□□□ -0.22
LIMS2-205ENST00000409455 GPR3P46089 330 aa13.7□□□□□ -0.22
LIMS2-205ENST00000409455 PPM1FP49593 454 aaPredicted RBP13.7□□□□□ -0.22
LIMS2-205ENST00000409455 ZXDAP98168 799 aa13.7□□□□□ -0.22
LIMS2-205ENST00000409455 INSM1Q01101 510 aaPredicted RBP13.7□□□□□ -0.22
LIMS2-205ENST00000409455 GLO1Q04760 184 aa13.7□□□□□ -0.22
LIMS2-205ENST00000409455 VAX1Q5SQQ9 334 aa13.7□□□□□ -0.22
LIMS2-205ENST00000409455 POMZP3Q6PJE2 187 aa13.7□□□□□ -0.22
LIMS2-205ENST00000409455 FAM71E2Q8N5Q1 922 aa13.7□□□□□ -0.22
LIMS2-205ENST00000409455 WDR77Q9BQA1 342 aaPredicted RBP13.7□□□□□ -0.22
LIMS2-205ENST00000409455 OPA3Q9H6K4 179 aa13.7□□□□□ -0.22
LIMS2-205ENST00000409455 G6PC2Q9NQR9 355 aa13.7□□□□□ -0.22
LIMS2-205ENST00000409455 VPS13AQ96RL7 3174 aa13.7□□□□□ -0.22
LIMS2-205ENST00000409455 TMEM269A0A1B0GVZ9 245 aa13.7□□□□□ -0.22
LIMS2-205ENST00000409455 RHPN2P1A8MT19 583 aa13.7□□□□□ -0.22
LIMS2-205ENST00000409455 TGFBR3LH3BV60 316 aa13.7□□□□□ -0.22
LIMS2-205ENST00000409455 SRSF10O75494 262 aaKnown RBP13.7□□□□□ -0.22
LIMS2-205ENST00000409455 GAPDHP04406 335 aaKnown RBP13.7□□□□□ -0.22
LIMS2-205ENST00000409455 FPR2P25090 351 aa13.7□□□□□ -0.22
LIMS2-205ENST00000409455 SNCAP37840 140 aa13.7□□□□□ -0.22
LIMS2-205ENST00000409455 CAPZBP47756 277 aa13.7□□□□□ -0.22
LIMS2-205ENST00000409455 SUPT4H1P63272 117 aaKnown RBP13.7□□□□□ -0.22
LIMS2-205ENST00000409455 QRFPP83859 136 aa13.7□□□□□ -0.22
LIMS2-205ENST00000409455 SLC25A45Q8N413 288 aa13.7□□□□□ -0.22
LIMS2-205ENST00000409455 C19orf47Q8N9M1 422 aaKnown RBP13.7□□□□□ -0.22
LIMS2-205ENST00000409455 OR52N4Q8NGI2 321 aa13.7□□□□□ -0.22
LIMS2-205ENST00000409455 EIF5A2Q9GZV4 153 aaKnown RBP13.7□□□□□ -0.22
LIMS2-205ENST00000409455 UCK1Q9HA47 277 aa13.7□□□□□ -0.22
LIMS2-205ENST00000409455 FAM212BQ9NTI7 297 aaPredicted RBP13.7□□□□□ -0.22
LIMS2-205ENST00000409455 LILRA5A6NI73 299 aa13.69□□□□□ -0.22
LIMS2-205ENST00000409455 P2RY10O00398 339 aa13.69□□□□□ -0.22
LIMS2-205ENST00000409455 SFTPBP07988 381 aa13.69□□□□□ -0.22
LIMS2-205ENST00000409455 CXCR1P25024 350 aa13.69□□□□□ -0.22
LIMS2-205ENST00000409455 RPL12P30050 165 aaKnown RBP13.69□□□□□ -0.22
LIMS2-205ENST00000409455 GUK1Q16774 197 aa13.69□□□□□ -0.22
LIMS2-205ENST00000409455 C14orf28Q4W4Y0 310 aa13.69□□□□□ -0.22
LIMS2-205ENST00000409455 MIDNQ504T8 468 aa13.69□□□□□ -0.22
LIMS2-205ENST00000409455 ZNF565Q8N9K5 539 aa13.69□□□□□ -0.22
LIMS2-205ENST00000409455 ZNF519Q8TB69 540 aa13.69□□□□□ -0.22
LIMS2-205ENST00000409455 FGGYQ96C11 551 aa13.69□□□□□ -0.22
LIMS2-205ENST00000409455 SLC25A36Q96CQ1 311 aa13.69□□□□□ -0.22
LIMS2-205ENST00000409455 SPSB2Q99619 263 aa13.69□□□□□ -0.22
LIMS2-205ENST00000409455 VSX1Q9NZR4 365 aaPredicted RBP13.69□□□□□ -0.22
LIMS2-205ENST00000409455 ARID1BQ8NFD5 2236 aaPredicted RBP13.69□□□□□ -0.22
LIMS2-205ENST00000409455 UMAD1C9J7I0 102 aa13.69□□□□□ -0.22
LIMS2-205ENST00000409455 GMFGO60234 142 aa13.69□□□□□ -0.22
LIMS2-205ENST00000409455 BGLAPP02818 100 aa13.69□□□□□ -0.22
LIMS2-205ENST00000409455 ARG1P05089 322 aa13.69□□□□□ -0.22
LIMS2-205ENST00000409455 HOXB5P09067 269 aa13.69□□□□□ -0.22
LIMS2-205ENST00000409455 EMP2P54851 167 aa13.69□□□□□ -0.22
LIMS2-205ENST00000409455 OPN5Q6U736 354 aa13.69□□□□□ -0.22
LIMS2-205ENST00000409455 COX15Q7KZN9 410 aa13.69□□□□□ -0.22
LIMS2-205ENST00000409455 OR2I1PQ8NGU4 316 aa13.69□□□□□ -0.22
LIMS2-205ENST00000409455 IER2Q9BTL4 223 aa13.69□□□□□ -0.22
LIMS2-205ENST00000409455 RAB33BQ9H082 229 aa13.69□□□□□ -0.22
LIMS2-205ENST00000409455 FBXL17Q9UF56 701 aa13.69□□□□□ -0.22
LIMS2-205ENST00000409455 TRAV36DV7A0A075B6V5 113 aa13.68□□□□□ -0.22
LIMS2-205ENST00000409455 PRKNO60260 465 aaPredicted RBP13.68□□□□□ -0.22
LIMS2-205ENST00000409455 HOXA6P31267 233 aa13.68□□□□□ -0.22
LIMS2-205ENST00000409455 DHPSP49366 369 aaPredicted RBP13.68□□□□□ -0.22
LIMS2-205ENST00000409455 GFERP55789 205 aa13.68□□□□□ -0.22
LIMS2-205ENST00000409455 FAM3AP98173 230 aa13.68□□□□□ -0.22
LIMS2-205ENST00000409455 ZNF616Q08AN1 781 aa13.68□□□□□ -0.22
LIMS2-205ENST00000409455 NSUN5P2Q63ZY6 315 aa13.68□□□□□ -0.22
LIMS2-205ENST00000409455 OR2A2Q6IF42 318 aa13.68□□□□□ -0.22
LIMS2-205ENST00000409455 C1QL4Q86Z23 238 aa13.68□□□□□ -0.22
LIMS2-205ENST00000409455 ZNF101Q8IZC7 436 aa13.68□□□□□ -0.22
LIMS2-205ENST00000409455 OR56B1Q8NGI3 324 aa13.68□□□□□ -0.22
LIMS2-205ENST00000409455 OR5H2Q8NGV7 314 aa13.68□□□□□ -0.22
LIMS2-205ENST00000409455 ZNF524Q96C55 264 aa13.68□□□□□ -0.22
LIMS2-205ENST00000409455 TGM7Q96PF1 710 aa13.68□□□□□ -0.22
LIMS2-205ENST00000409455 PARP12Q9H0J9 701 aaKnown RBP13.68□□□□□ -0.22
LIMS2-205ENST00000409455 THADAQ6YHU6 1953 aa13.68□□□□□ -0.22
LIMS2-205ENST00000409455 IFNA2P01563 188 aa13.68□□□□□ -0.22
LIMS2-205ENST00000409455 CHRM2P08172 466 aa13.68□□□□□ -0.22
LIMS2-205ENST00000409455 RNH1P13489 461 aaKnown RBP13.68□□□□□ -0.22
LIMS2-205ENST00000409455 ZNF823P16415 610 aa13.68□□□□□ -0.22
LIMS2-205ENST00000409455 IL15RAQ13261 267 aa13.68□□□□□ -0.22
LIMS2-205ENST00000409455 SGCBQ16585 318 aa13.68□□□□□ -0.22
LIMS2-205ENST00000409455 HIST2H3AQ71DI3 136 aa13.68□□□□□ -0.22
LIMS2-205ENST00000409455 PEG10Q86TG7 708 aaKnown RBP13.68□□□□□ -0.22
LIMS2-205ENST00000409455 RTN4RL2Q86UN3 420 aa13.68□□□□□ -0.22
LIMS2-205ENST00000409455 RTBDNQ9BSG5 229 aaPredicted RBP13.68□□□□□ -0.22
LIMS2-205ENST00000409455 PLA2G2EQ9NZK7 142 aa13.68□□□□□ -0.22
LIMS2-205ENST00000409455 SLC5A6Q9Y289 635 aa13.68□□□□□ -0.22
LIMS2-205ENST00000409455 CCDC163A0A0D9SF12 145 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 A0A1W2PPE2 198 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 SLC34A2O95436 690 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 GSTP1P09211 210 aaKnown RBP13.67□□□□□ -0.22
LIMS2-205ENST00000409455 MYF5P13349 255 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms