RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 SGK3Q96BR1 496 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 SLC7A6OSQ96CW6 309 aaPredicted RBP7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 DMRTB1Q96MA1 342 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 HIST1H2AAQ96QV6 131 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 CNN2Q99439 309 aaKnown RBP7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 MOB1AQ9H8S9 216 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 KRT84Q9NSB2 600 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 H2AFY2Q9P0M6 372 aaPredicted RBP7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 ZNF69Q9UC07 566 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 ANK2Q01484 3957 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 DOCK11Q5JSL3 2073 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 A0A0U1RQV5 110 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 C3orf80F5H4A9 247 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 SELENOFO60613 162 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 CIB2O75838 187 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 CST4P01036 141 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 PSKH1P11801 424 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 SLC2A5P22732 501 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 FASP25445 335 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 CFHR2P36980 270 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 MAP2K3P46734 347 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 PAX2Q02962 417 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 BNIP1Q12981 228 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 BAMBIQ13145 260 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 APOFQ13790 326 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 PDCD1Q15116 288 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 ATP6AP1Q15904 470 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 ZBTB37Q5TC79 503 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 C1orf146Q5VVC0 180 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 FAHD1Q6P587 224 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 PRSS45Q7RTY3 260 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 THAP5Q7Z6K1 395 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 TMEM179BQ7Z7N9 219 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 COMMD2Q86X83 199 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 ZDHHC13Q8IUH4 622 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 GID4Q8IVV7 300 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 ZDHHC23Q8IYP9 409 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 CMTM4Q8IZR5 234 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 GCSAMQ8N6F7 178 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 SIGLECL1Q8N7X8 197 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 OR1M1Q8NGA1 313 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 LRRC29Q8WV35 223 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 C22orf15Q8WYQ4 148 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 DACT3Q96B18 629 aaPredicted RBP7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 OSBPL10Q9BXB5 764 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 DNTTIP1Q9H147 329 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 BRD7Q9NPI1 651 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 FAM53CQ9NYF3 392 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 TVP23BQ9NYZ1 205 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 KAAG1Q9UBP8 84 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 LRP12Q9Y561 859 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 SVEP1Q4LDE5 3571 aa7.57□□□□□ -1.2
SNORD88A-201ENST00000408314 ZNF816-ZNF321PA0A0X1KG74 233 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 TMEM269A0A1B0GVZ9 245 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 DNAJC9-AS1A6NH13 148 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 OR5B21A6NL26 309 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 ZNF879B4DU55 563 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 G3V2T6 193 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 TMPRSS2O15393 492 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 GSC2O15499 205 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 MTRF1O75570 445 aaKnown RBP7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 TOX4O94842 621 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 PLATP00750 562 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 RNASE1P07998 156 aaKnown RBP7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 ALOX5APP20292 161 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 PRKACGP22612 351 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 CFPP27918 469 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 RIDAP52758 137 aaKnown RBP7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 FGF12P61328 243 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 ROM1Q03395 351 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 PRDX4Q13162 271 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 PTGES3Q15185 160 aaKnown RBP7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 KLF17Q5JT82 389 aaPredicted RBP7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 FAM201AQ5SY85 155 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 SFRP4Q6FHJ7 346 aaPredicted RBP7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 LYPD2Q6UXB3 125 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 KCTD8Q6ZWB6 473 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 ZNF679Q8IYX0 411 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 HS3ST5Q8IZT8 346 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 TMEM86BQ8N661 226 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 ZDHHC22Q8N966 263 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 SGMS2Q8NHU3 365 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 GATAD2BQ8WXI9 593 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 ZDHHC16Q969W1 377 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 ITPKCQ96DU7 683 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 FAM71F1Q96KD3 344 aaPredicted RBP7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 AMELYQ99218 206 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 CADM1Q9BY67 442 aaKnown RBP7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 GABARAPL1Q9H0R8 117 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 TLNRD1Q9H1K6 362 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 NOX4Q9NPH5 578 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 DNAJB11Q9UBS4 358 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 IKZF2Q9UKS7 526 aa7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 CAB39Q9Y376 341 aaPredicted RBP7.56□□□□□ -1.2
SNORD88A-201ENST00000408314 ARHGAP32A7KAX9 2087 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 A0A1B0GUS0 222 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 A0A1B0GVI7 797 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 SRRM5B3KS81 715 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 ZNF670-ZNF695F2Z2N8 137 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms