RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 ACKR3P25106 362 aa16.01■□□□□ 0.15
SMARCB1-204ENST00000407422 NPY4RP50391 375 aa16.01■□□□□ 0.15
SMARCB1-204ENST00000407422 ELF3P78545 371 aaPredicted RBP16.01■□□□□ 0.15
SMARCB1-204ENST00000407422 APOFQ13790 326 aa16.01■□□□□ 0.15
SMARCB1-204ENST00000407422 AWAT1Q58HT5 328 aa16.01■□□□□ 0.15
SMARCB1-204ENST00000407422 SLC35D3Q5M8T2 416 aa16.01■□□□□ 0.15
SMARCB1-204ENST00000407422 BRD3OSQ6XYD6 125 aa16.01■□□□□ 0.15
SMARCB1-204ENST00000407422 C9orf139Q6ZV77 190 aa16.01■□□□□ 0.15
SMARCB1-204ENST00000407422 LRRC29Q8WV35 223 aa16.01■□□□□ 0.15
SMARCB1-204ENST00000407422 LYZL4Q96KX0 146 aa16.01■□□□□ 0.15
SMARCB1-204ENST00000407422 PAPOLBQ9NRJ5 636 aaKnown RBP16.01■□□□□ 0.15
SMARCB1-204ENST00000407422 TVP23BQ9NYZ1 205 aa16.01■□□□□ 0.15
SMARCB1-204ENST00000407422 PKD1L1Q8TDX9 2849 aa16■□□□□ 0.15
SMARCB1-204ENST00000407422 TRRAPQ9Y4A5 3859 aa16■□□□□ 0.15
SMARCB1-204ENST00000407422 MDFIC2A0A1B0GVS7 189 aa16■□□□□ 0.15
SMARCB1-204ENST00000407422 ENSAO43768 121 aaKnown RBP16■□□□□ 0.15
SMARCB1-204ENST00000407422 SFTPBP07988 381 aa16■□□□□ 0.15
SMARCB1-204ENST00000407422 ALOX5APP20292 161 aa16■□□□□ 0.15
SMARCB1-204ENST00000407422 DAPP51397 102 aa16■□□□□ 0.15
SMARCB1-204ENST00000407422 SNAPC1Q16533 368 aa16■□□□□ 0.15
SMARCB1-204ENST00000407422 TEX36Q5VZQ5 186 aa16■□□□□ 0.15
SMARCB1-204ENST00000407422 FAHD1Q6P587 224 aa16■□□□□ 0.15
SMARCB1-204ENST00000407422 WDR82Q6UXN9 313 aa16■□□□□ 0.15
SMARCB1-204ENST00000407422 CSNK2A3Q8NEV1 391 aa16■□□□□ 0.15
SMARCB1-204ENST00000407422 UTP4Q969X6 686 aaKnown RBP16■□□□□ 0.15
SMARCB1-204ENST00000407422 SEH1LQ96EE3 360 aa16■□□□□ 0.15
SMARCB1-204ENST00000407422 RGCCQ9H4X1 137 aa16■□□□□ 0.15
SMARCB1-204ENST00000407422 TRIM36Q9NQ86 728 aa16■□□□□ 0.15
SMARCB1-204ENST00000407422 KIF17Q9P2E2 1029 aa16■□□□□ 0.15
SMARCB1-204ENST00000407422 LRP12Q9Y561 859 aa16■□□□□ 0.15
SMARCB1-204ENST00000407422 A0A1B0GW55 424 aa15.99■□□□□ 0.15
SMARCB1-204ENST00000407422 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.99■□□□□ 0.15
SMARCB1-204ENST00000407422 PSMD9O00233 223 aa15.99■□□□□ 0.15
SMARCB1-204ENST00000407422 NDUFA2O43678 99 aa15.99■□□□□ 0.15
SMARCB1-204ENST00000407422 DUX4L2P0CJ85 424 aa15.99■□□□□ 0.15
SMARCB1-204ENST00000407422 DUX4L3P0CJ86 424 aa15.99■□□□□ 0.15
SMARCB1-204ENST00000407422 DUX4L4P0CJ87 422 aa15.99■□□□□ 0.15
SMARCB1-204ENST00000407422 DUX4L5P0CJ88 424 aa15.99■□□□□ 0.15
SMARCB1-204ENST00000407422 DUX4L6P0CJ89 424 aa15.99■□□□□ 0.15
SMARCB1-204ENST00000407422 DUX4L7P0CJ90 424 aa15.99■□□□□ 0.15
SMARCB1-204ENST00000407422 GNALP38405 381 aa15.99■□□□□ 0.15
SMARCB1-204ENST00000407422 CRISP1P54107 249 aa15.99■□□□□ 0.15
SMARCB1-204ENST00000407422 CD276Q5ZPR3 534 aa15.99■□□□□ 0.15
SMARCB1-204ENST00000407422 DUX4L9Q6RFH8 374 aaPredicted RBP15.99■□□□□ 0.15
SMARCB1-204ENST00000407422 FGFRL1Q8N441 504 aa15.99■□□□□ 0.15
SMARCB1-204ENST00000407422 OR8B12Q8NGG6 310 aa15.99■□□□□ 0.15
SMARCB1-204ENST00000407422 ITPKCQ96DU7 683 aa15.99■□□□□ 0.15
SMARCB1-204ENST00000407422 NRBF2Q96F24 287 aa15.99■□□□□ 0.15
SMARCB1-204ENST00000407422 PCGF1Q9BSM1 259 aa15.99■□□□□ 0.15
SMARCB1-204ENST00000407422 RNPEPL1Q9HAU8 725 aa15.99■□□□□ 0.15
SMARCB1-204ENST00000407422 DUX4Q9UBX2 424 aa15.99■□□□□ 0.15
SMARCB1-204ENST00000407422 LAMP5Q9UJQ1 280 aa15.99■□□□□ 0.15
SMARCB1-204ENST00000407422 CCDC182A6NF36 153 aa15.98■□□□□ 0.15
SMARCB1-204ENST00000407422 ZNF850A8MQ14 1090 aa15.98■□□□□ 0.15
SMARCB1-204ENST00000407422 DVL1O14640 695 aa15.98■□□□□ 0.15
SMARCB1-204ENST00000407422 CDIPTO14735 213 aa15.98■□□□□ 0.15
SMARCB1-204ENST00000407422 TMPRSS2O15393 492 aa15.98■□□□□ 0.15
SMARCB1-204ENST00000407422 MRPL3P09001 348 aaKnown RBP15.98■□□□□ 0.15
SMARCB1-204ENST00000407422 MTNR1AP48039 350 aa15.98■□□□□ 0.15
SMARCB1-204ENST00000407422 PSMA6P60900 246 aaKnown RBP15.98■□□□□ 0.15
SMARCB1-204ENST00000407422 BNIP1Q12981 228 aa15.98■□□□□ 0.15
SMARCB1-204ENST00000407422 SLC9A3R2Q15599 337 aa15.98■□□□□ 0.15
SMARCB1-204ENST00000407422 TAF15Q92804 592 aaKnown RBP eCLIP15.98■□□□□ 0.15
SMARCB1-204ENST00000407422 TEAD3Q99594 435 aa15.98■□□□□ 0.15
SMARCB1-204ENST00000407422 TEX12Q9BXU0 123 aa15.98■□□□□ 0.15
SMARCB1-204ENST00000407422 PRR32B1ATL7 298 aa15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 ZNF879B4DU55 563 aa15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 HKR1P10072 659 aa15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 CFHR2P36980 270 aa15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 PRDX4Q13162 271 aa15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 PTGES3Q15185 160 aaKnown RBP15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 KRT77Q7Z794 578 aa15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 GALNT4Q8N4A0 578 aa15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 DNAJC9Q8WXX5 260 aa15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 CCL13Q99616 98 aa15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 FGF23Q9GZV9 251 aaPredicted RBP15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 TLNRD1Q9H1K6 362 aa15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 KAAG1Q9UBP8 84 aa15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 ANXA2P2A6NMY6 339 aa15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 M0R129 80 aa15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 PRKYO43930 277 aa15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 MITFO75030 526 aaPredicted RBP15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 RNASE1P07998 156 aaKnown RBP15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 MMP9P14780 707 aa15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 MICBQ29980 383 aa15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 DEFB112Q30KQ8 113 aa15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 WDR38Q5JTN6 314 aa15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 RUSC1-AS1Q66K80 236 aa15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 BTN2A1Q7KYR7 527 aa15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 BCDIN3DQ7Z5W3 292 aaKnown RBP15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 FTMTQ8N4E7 242 aa15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 OR5P3Q8WZ94 311 aa15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 PIGCQ92535 297 aa15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 RPL3LQ92901 407 aaKnown RBP15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 TBX15Q96SF7 602 aa15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 MICU1Q9BPX6 476 aa15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 TTTY10Q9BZA0 68 aa15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 YIPF3Q9GZM5 350 aa15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 NIPAL2Q9H841 368 aa15.97■□□□□ 0.15
SMARCB1-204ENST00000407422 MPC1Q9Y5U8 109 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms