RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 PMPCAQ10713 525 aa22.19■■□□□ 1.14
CPNE1-205ENST00000401607 KISS1Q15726 138 aa22.19■■□□□ 1.14
CPNE1-205ENST00000401607 TMEM42Q69YG0 159 aa22.19■■□□□ 1.14
CPNE1-205ENST00000401607 ZNF610Q8N9Z0 462 aa22.19■■□□□ 1.14
CPNE1-205ENST00000401607 APOBEC3DQ96AK3 386 aaPredicted RBP22.19■■□□□ 1.14
CPNE1-205ENST00000401607 BOD1Q96IK1 185 aa22.19■■□□□ 1.14
CPNE1-205ENST00000401607 OPN3Q9H1Y3 402 aaPredicted RBP22.19■■□□□ 1.14
CPNE1-205ENST00000401607 MRPS28Q9Y2Q9 187 aaKnown RBP22.19■■□□□ 1.14
CPNE1-205ENST00000401607 BSNQ9UPA5 3926 aa22.19■■□□□ 1.14
CPNE1-205ENST00000401607 A0A1W2PR80 420 aa22.18■■□□□ 1.14
CPNE1-205ENST00000401607 CRHP06850 196 aa22.18■■□□□ 1.14
CPNE1-205ENST00000401607 FAM157BP0CG42 384 aa22.18■■□□□ 1.14
CPNE1-205ENST00000401607 KIR2DL3P43628 341 aa22.18■■□□□ 1.14
CPNE1-205ENST00000401607 MRPS10P82664 201 aaKnown RBP22.18■■□□□ 1.14
CPNE1-205ENST00000401607 CCDC36Q8IYA8 594 aa22.18■■□□□ 1.14
CPNE1-205ENST00000401607 C15orf40Q8WUR7 153 aa22.18■■□□□ 1.14
CPNE1-205ENST00000401607 GAL3ST1Q99999 423 aa22.18■■□□□ 1.14
CPNE1-205ENST00000401607 RBFOX1Q9NWB1 397 aaKnown RBP22.18■■□□□ 1.14
CPNE1-205ENST00000401607 FBLN5Q9UBX5 448 aa22.18■■□□□ 1.14
CPNE1-205ENST00000401607 RAB22AQ9UL26 194 aa22.18■■□□□ 1.14
CPNE1-205ENST00000401607 TMEM14DPA8MWL7 114 aa22.17■■□□□ 1.14
CPNE1-205ENST00000401607 ZNF14P17017 642 aaPredicted RBP22.17■■□□□ 1.14
CPNE1-205ENST00000401607 WNT5AP41221 380 aa22.17■■□□□ 1.14
CPNE1-205ENST00000401607 UBE2NP61088 152 aaKnown RBP22.17■■□□□ 1.14
CPNE1-205ENST00000401607 GLIPR1L1Q6UWM5 242 aa22.17■■□□□ 1.14
CPNE1-205ENST00000401607 DNM1P46Q6ZS02 220 aa22.17■■□□□ 1.14
CPNE1-205ENST00000401607 C1orf162Q8NEQ5 155 aaPredicted RBP22.17■■□□□ 1.14
CPNE1-205ENST00000401607 PIGTQ969N2 578 aa22.17■■□□□ 1.14
CPNE1-205ENST00000401607 ZC3HAV1LQ96H79 300 aaKnown RBP22.17■■□□□ 1.14
CPNE1-205ENST00000401607 GPER1Q99527 375 aa22.17■■□□□ 1.14
CPNE1-205ENST00000401607 BOD1L1Q8NFC6 3051 aa22.17■■□□□ 1.14
CPNE1-205ENST00000401607 TRAV18A0A075B6X5 111 aa22.17■■□□□ 1.14
CPNE1-205ENST00000401607 ORC5O43913 435 aa22.17■■□□□ 1.14
CPNE1-205ENST00000401607 GMDSO60547 372 aa22.17■■□□□ 1.14
CPNE1-205ENST00000401607 PFDN1O60925 122 aa22.17■■□□□ 1.14
CPNE1-205ENST00000401607 NGFP01138 241 aa22.17■■□□□ 1.14
CPNE1-205ENST00000401607 TIMP3P35625 211 aa22.17■■□□□ 1.14
CPNE1-205ENST00000401607 GDNFP39905 211 aa22.17■■□□□ 1.14
CPNE1-205ENST00000401607 ID4P47928 161 aa22.17■■□□□ 1.14
CPNE1-205ENST00000401607 GK2Q14410 553 aaPredicted RBP22.17■■□□□ 1.14
CPNE1-205ENST00000401607 GPR176Q14439 515 aa22.17■■□□□ 1.14
CPNE1-205ENST00000401607 MZT2BQ6NZ67 158 aa22.17■■□□□ 1.14
CPNE1-205ENST00000401607 C3P1Q6ZMU1 363 aa22.17■■□□□ 1.14
CPNE1-205ENST00000401607 MYPOPQ86VE0 399 aaPredicted RBP22.17■■□□□ 1.14
CPNE1-205ENST00000401607 SLC30A7Q8NEW0 376 aa22.17■■□□□ 1.14
CPNE1-205ENST00000401607 SLX1AQ9BQ83 275 aa22.17■■□□□ 1.14
CPNE1-205ENST00000401607 REPIN1Q9BWE0 567 aaKnown RBP22.17■■□□□ 1.14
CPNE1-205ENST00000401607 STARD10Q9Y365 291 aa22.17■■□□□ 1.14
CPNE1-205ENST00000401607 RBMX2Q9Y388 322 aaKnown RBP22.17■■□□□ 1.14
CPNE1-205ENST00000401607 PTPRQQ9UMZ3 2332 aa22.17■■□□□ 1.14
CPNE1-205ENST00000401607 MEIOCA2RUB1 952 aa22.16■■□□□ 1.14
CPNE1-205ENST00000401607 MOGAT2Q3SYC2 334 aa22.16■■□□□ 1.14
CPNE1-205ENST00000401607 CLVS2Q5SYC1 327 aa22.16■■□□□ 1.14
CPNE1-205ENST00000401607 KRT74Q7RTS7 529 aa22.16■■□□□ 1.14
CPNE1-205ENST00000401607 TOMM5Q8N4H5 51 aa22.16■■□□□ 1.14
CPNE1-205ENST00000401607 UBASH3BQ8TF42 649 aa22.16■■□□□ 1.14
CPNE1-205ENST00000401607 FAM46BQ96A09 425 aa22.16■■□□□ 1.14
CPNE1-205ENST00000401607 PHF21AQ96BD5 680 aa22.16■■□□□ 1.14
CPNE1-205ENST00000401607 MMP28Q9H239 520 aa22.16■■□□□ 1.14
CPNE1-205ENST00000401607 POFUT1Q9H488 388 aa22.16■■□□□ 1.14
CPNE1-205ENST00000401607 C1QTNF9BB2RNN3 333 aa22.15■■□□□ 1.14
CPNE1-205ENST00000401607 CELA3BP08861 270 aa22.15■■□□□ 1.14
CPNE1-205ENST00000401607 C1QTNF9P0C862 333 aa22.15■■□□□ 1.14
CPNE1-205ENST00000401607 HOXB1P14653 301 aaPredicted RBP22.15■■□□□ 1.14
CPNE1-205ENST00000401607 KLF9Q13886 244 aaPredicted RBP22.15■■□□□ 1.14
CPNE1-205ENST00000401607 EIF2S3LQ2VIR3 472 aaKnown RBP22.15■■□□□ 1.14
CPNE1-205ENST00000401607 ZNF101Q8IZC7 436 aa22.15■■□□□ 1.14
CPNE1-205ENST00000401607 CADM3Q8N126 398 aa22.15■■□□□ 1.14
CPNE1-205ENST00000401607 ENKURQ8TC29 256 aa22.15■■□□□ 1.14
CPNE1-205ENST00000401607 FCAMRQ8WWV6 532 aa22.15■■□□□ 1.14
CPNE1-205ENST00000401607 SPSB1Q96BD6 273 aa22.15■■□□□ 1.14
CPNE1-205ENST00000401607 ITPKCQ96DU7 683 aa22.15■■□□□ 1.14
CPNE1-205ENST00000401607 CACNG2Q9Y698 323 aa22.15■■□□□ 1.14
CPNE1-205ENST00000401607 IL2RAP01589 272 aa22.15■■□□□ 1.14
CPNE1-205ENST00000401607 PRR30Q53SZ7 412 aaPredicted RBP22.15■■□□□ 1.14
CPNE1-205ENST00000401607 OR2W3Q7Z3T1 314 aa22.15■■□□□ 1.14
CPNE1-205ENST00000401607 GLCCI1Q86VQ1 547 aa22.15■■□□□ 1.14
CPNE1-205ENST00000401607 CXorf67Q86X51 503 aaPredicted RBP22.15■■□□□ 1.14
CPNE1-205ENST00000401607 WDR31Q8NA23 367 aa22.15■■□□□ 1.14
CPNE1-205ENST00000401607 OR5D18Q8NGL1 313 aa22.15■■□□□ 1.14
CPNE1-205ENST00000401607 ITFG2Q969R8 447 aa22.15■■□□□ 1.14
CPNE1-205ENST00000401607 SNRNP40Q96DI7 357 aaKnown RBP22.15■■□□□ 1.14
CPNE1-205ENST00000401607 PTTG3PQ9NZH4 202 aa22.15■■□□□ 1.14
CPNE1-205ENST00000401607 KLK11Q9UBX7 282 aa22.15■■□□□ 1.14
CPNE1-205ENST00000401607 SVILO95425 2214 aa22.14■■□□□ 1.14
CPNE1-205ENST00000401607 A0A0A6YYH2 397 aa22.14■■□□□ 1.13
CPNE1-205ENST00000401607 ZNF816-ZNF321PA0A0X1KG74 233 aa22.14■■□□□ 1.13
CPNE1-205ENST00000401607 A6NJ64 397 aa22.14■■□□□ 1.13
CPNE1-205ENST00000401607 NRASP01111 189 aa22.14■■□□□ 1.13
CPNE1-205ENST00000401607 HOXD4P09016 255 aaPredicted RBP22.14■■□□□ 1.13
CPNE1-205ENST00000401607 CEACAM8P31997 349 aaPredicted RBP22.14■■□□□ 1.13
CPNE1-205ENST00000401607 MALLQ13021 153 aa22.14■■□□□ 1.13
CPNE1-205ENST00000401607 CNN3Q15417 329 aaKnown RBP22.14■■□□□ 1.13
CPNE1-205ENST00000401607 ZBTB37Q5TC79 503 aa22.14■■□□□ 1.13
CPNE1-205ENST00000401607 PNLDC1Q8NA58 520 aaKnown RBP22.14■■□□□ 1.13
CPNE1-205ENST00000401607 DUSP18Q8NEJ0 188 aa22.14■■□□□ 1.13
CPNE1-205ENST00000401607 TUBD1Q9UJT1 453 aa22.14■■□□□ 1.13
CPNE1-205ENST00000401607 NAT2P11245 290 aa22.13■■□□□ 1.13
CPNE1-205ENST00000401607 BTCP35070 178 aa22.13■■□□□ 1.13
CPNE1-205ENST00000401607 PTGFRP43088 359 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms