RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 RFX2P48378 723 aa12.42□□□□□ -0.42
SCAF4-202ENST00000399804 SOX8P57073 446 aa12.42□□□□□ -0.42
SCAF4-202ENST00000399804 ZFP36L1Q07352 338 aaKnown RBP12.42□□□□□ -0.42
SCAF4-202ENST00000399804 FNDC7Q5VTL7 733 aa12.42□□□□□ -0.42
SCAF4-202ENST00000399804 ZNF767PQ75MW2 155 aa12.42□□□□□ -0.42
SCAF4-202ENST00000399804 IMMP1LQ96LU5 166 aa12.42□□□□□ -0.42
SCAF4-202ENST00000399804 PTTG3PQ9NZH4 202 aa12.42□□□□□ -0.42
SCAF4-202ENST00000399804 CHCHD2Q9Y6H1 151 aaPredicted RBP12.42□□□□□ -0.42
SCAF4-202ENST00000399804 RRP8O43159 456 aaKnown RBP12.42□□□□□ -0.42
SCAF4-202ENST00000399804 CCL2P13500 99 aa12.42□□□□□ -0.42
SCAF4-202ENST00000399804 ARHGDIBP52566 201 aa12.42□□□□□ -0.42
SCAF4-202ENST00000399804 RNPS1Q15287 305 aaKnown RBP12.42□□□□□ -0.42
SCAF4-202ENST00000399804 C19orf48Q6RUI8 117 aa12.42□□□□□ -0.42
SCAF4-202ENST00000399804 POFUT1Q9H488 388 aa12.42□□□□□ -0.42
SCAF4-202ENST00000399804 SPRY1O43609 319 aaPredicted RBP12.41□□□□□ -0.42
SCAF4-202ENST00000399804 SPDEFO95238 335 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 IL2RAP01589 272 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 GRPP07492 148 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 PPA1Q15181 289 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 CLVS2Q5SYC1 327 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 ZNF546Q86UE3 836 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 CMTM1Q8IZ96 169 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 EXD3Q8N9H8 876 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 CCDC71LQ8N9Z2 235 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 FREM3P0C091 2139 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 ZNF891A8MT65 544 aaPredicted RBP12.41□□□□□ -0.42
SCAF4-202ENST00000399804 CNOT4O95628 575 aaKnown RBP12.41□□□□□ -0.42
SCAF4-202ENST00000399804 ZNF17P17021 662 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 MST1P26927 711 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 GNMTQ14749 295 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 SPATA46Q5T0L3 261 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 ZNF468Q5VIY5 522 aaPredicted RBP12.41□□□□□ -0.42
SCAF4-202ENST00000399804 PRSS35Q8N3Z0 413 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 MTFP1Q9UDX5 166 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 CLDN16Q9Y5I7 305 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 A0A0A6YYH2 397 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 A0A1W2PR80 420 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 A6NJ64 397 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 PIN1P1O15428 100 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 NKX2-8O15522 239 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 LANCL1O43813 399 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 SP1P08047 785 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 HRH1P35367 487 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 AGFG1P52594 562 aaKnown RBP12.41□□□□□ -0.42
SCAF4-202ENST00000399804 ZNF133P52736 654 aaPredicted RBP12.41□□□□□ -0.42
SCAF4-202ENST00000399804 EFNB1P98172 346 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 BEX5Q5H9J7 111 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 LYPD8Q6UX82 237 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 IQCF2Q8IXL9 164 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 UPRTQ96BW1 309 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 ST6GAL2Q96JF0 529 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 UQCC2Q9BRT2 126 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 GON7Q9BXV9 100 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 ZNF436Q9C0F3 470 aaPredicted RBP12.41□□□□□ -0.42
SCAF4-202ENST00000399804 WASF3Q9UPY6 502 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 ZNF175Q9Y473 711 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 PCNX2A6NKB5 2137 aa12.41□□□□□ -0.42
SCAF4-202ENST00000399804 TRAF3IP2O43734 574 aaPredicted RBP12.4□□□□□ -0.42
SCAF4-202ENST00000399804 RAMP1O60894 148 aa12.4□□□□□ -0.42
SCAF4-202ENST00000399804 NXPH2O95156 264 aa12.4□□□□□ -0.42
SCAF4-202ENST00000399804 CDCP2Q5VXM1 449 aa12.4□□□□□ -0.42
SCAF4-202ENST00000399804 RHOUQ7L0Q8 258 aa12.4□□□□□ -0.42
SCAF4-202ENST00000399804 DCUN1D4Q92564 292 aa12.4□□□□□ -0.42
SCAF4-202ENST00000399804 DDOQ99489 341 aa12.4□□□□□ -0.42
SCAF4-202ENST00000399804 HES7Q9BYE0 225 aa12.4□□□□□ -0.42
SCAF4-202ENST00000399804 TINAGL1Q9GZM7 467 aaPredicted RBP12.4□□□□□ -0.42
SCAF4-202ENST00000399804 SULT1C2O00338 296 aa12.4□□□□□ -0.42
SCAF4-202ENST00000399804 NTN3O00634 580 aaPredicted RBP12.4□□□□□ -0.42
SCAF4-202ENST00000399804 AKR7A2O43488 359 aa12.4□□□□□ -0.42
SCAF4-202ENST00000399804 PI3P19957 117 aa12.4□□□□□ -0.42
SCAF4-202ENST00000399804 AKR1C2P52895 323 aa12.4□□□□□ -0.42
SCAF4-202ENST00000399804 ROM1Q03395 351 aa12.4□□□□□ -0.42
SCAF4-202ENST00000399804 ATP1A1-AS1Q5TC04 95 aa12.4□□□□□ -0.42
SCAF4-202ENST00000399804 PLXDC2Q6UX71 529 aa12.4□□□□□ -0.42
SCAF4-202ENST00000399804 TIPARPQ7Z3E1 657 aaKnown RBP12.4□□□□□ -0.42
SCAF4-202ENST00000399804 LSM5Q9Y4Y9 91 aaKnown RBP12.4□□□□□ -0.42
SCAF4-202ENST00000399804 PLXND1Q9Y4D7 1925 aa12.4□□□□□ -0.42
SCAF4-202ENST00000399804 ZNF816-ZNF321PA0A0X1KG74 233 aa12.4□□□□□ -0.42
SCAF4-202ENST00000399804 H3BMH7 237 aa12.4□□□□□ -0.42
SCAF4-202ENST00000399804 DNPH1O43598 174 aa12.4□□□□□ -0.42
SCAF4-202ENST00000399804 OR52W1Q6IF63 320 aa12.4□□□□□ -0.42
SCAF4-202ENST00000399804 RFPL4BQ6ZWI9 263 aa12.4□□□□□ -0.42
SCAF4-202ENST00000399804 ZNF441Q8N8Z8 693 aa12.4□□□□□ -0.42
SCAF4-202ENST00000399804 ZFAND1Q8TCF1 268 aa12.4□□□□□ -0.42
SCAF4-202ENST00000399804 TTTY12Q9BZ98 90 aa12.4□□□□□ -0.42
SCAF4-202ENST00000399804 PGA4P0DJD7 388 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 PGA3P0DJD8 388 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 PTGFRP43088 359 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 HAAOP46952 286 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 LRRC20Q8TCA0 184 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 SLC17A5Q9NRA2 495 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 SEMA5BQ9P283 1151 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 CYB5R1Q9UHQ9 305 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 PYCARD-AS1I3L0S3 204 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 KLF7O75840 302 aaPredicted RBP12.39□□□□□ -0.43
SCAF4-202ENST00000399804 C1QBP02746 253 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 TTRP02766 147 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 TMIGD3P0DMS9 266 aaPredicted RBP12.39□□□□□ -0.43
SCAF4-202ENST00000399804 IRF2P14316 349 aa12.39□□□□□ -0.43
SCAF4-202ENST00000399804 OR3A4PP47883 348 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms