RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 KIR2DS1A0A191URI9 304 aa12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 hCG_1807616A0A1W2PRN6 198 aa12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 SLC22A31A6NKX4 558 aa12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 ANXA2P2A6NMY6 339 aa12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 TRIM77I1YAP6 450 aa12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 TNFRSF13BO14836 293 aaPredicted RBP12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 MITFO75030 526 aaPredicted RBP12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 ZNF254O75437 659 aa12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 CIB2O75838 187 aa12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 ACKR3P25106 362 aa12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 EPHA2P29317 976 aa12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 NXNL2Q5VZ03 156 aa12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 TEX36Q5VZQ5 186 aa12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 C12orf73Q69YU5 71 aa12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 ZNF826PQ6ZT77 177 aa12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 WDR86Q86TI4 376 aa12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 GALNT4Q8N4A0 578 aa12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 C19orf18Q8NEA5 215 aa12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 OR1M1Q8NGA1 313 aa12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 OR8B12Q8NGG6 310 aa12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 TMEM163Q8TC26 289 aa12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 ASB17Q8WXJ9 295 aa12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 LRTOMTQ8WZ04 291 aa12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 UPRTQ96BW1 309 aa12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 ITPKCQ96DU7 683 aa12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 CNN2Q99439 309 aaKnown RBP12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 MROQ9BYG7 248 aa12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 TLNRD1Q9H1K6 362 aa12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 ERVK-18Q9QC07 812 aa12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 RHBDD3Q9Y3P4 386 aa12.39□□□□□ -0.43
SMIM11A-203ENST00000399299 C3orf80F5H4A9 247 aa12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 CST4P01036 141 aa12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 MRPL3P09001 348 aaKnown RBP12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 CFHR2P36980 270 aa12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 HCCSP53701 268 aa12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 HOXA4Q00056 320 aaPredicted RBP12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 C11orf91Q3C1V1 193 aa12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 AADACL4Q5VUY2 407 aa12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 CD276Q5ZPR3 534 aa12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 SFRP4Q6FHJ7 346 aaPredicted RBP12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 WDR82Q6UXN9 313 aa12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 ASRGL1Q7L266 308 aa12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 MEPCEQ7L2J0 689 aaKnown RBP12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 KRT74Q7RTS7 529 aa12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 AMIGO2Q86SJ2 522 aa12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 FAM90A1Q86YD7 464 aa12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 C11orf53Q8IXP5 236 aa12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 ZNF679Q8IYX0 411 aa12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 TCEANCQ8N8B7 351 aa12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 BOLLQ8N9W6 283 aaKnown RBP12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 FAM216AQ8WUB2 273 aa12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 CENPNQ96H22 339 aaPredicted RBP12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 LYZL4Q96KX0 146 aa12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 OR8B4Q96RC9 309 aa12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 MNTQ99583 582 aa12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 MICU1Q9BPX6 476 aa12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 NUDT16L1Q9BRJ7 211 aaKnown RBP12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 OSBPL10Q9BXB5 764 aa12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 FAM206AQ9NX38 181 aa12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 KAAG1Q9UBP8 84 aa12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 CTSZQ9UBR2 303 aa12.38□□□□□ -0.43
SMIM11A-203ENST00000399299 TMEM269A0A1B0GVZ9 245 aa12.37□□□□□ -0.43
SMIM11A-203ENST00000399299 TMEM210A6NLX4 147 aa12.37□□□□□ -0.43
SMIM11A-203ENST00000399299 ADAM20O43506 726 aa12.37□□□□□ -0.43
SMIM11A-203ENST00000399299 ENSAO43768 121 aaKnown RBP12.37□□□□□ -0.43
SMIM11A-203ENST00000399299 RGS9O75916 674 aaPredicted RBP12.37□□□□□ -0.43
SMIM11A-203ENST00000399299 ATP6V1B1P15313 513 aa12.37□□□□□ -0.43
SMIM11A-203ENST00000399299 MUC1P15941 1255 aaPredicted RBP12.37□□□□□ -0.43
SMIM11A-203ENST00000399299 RIDAP52758 137 aaKnown RBP12.37□□□□□ -0.43
SMIM11A-203ENST00000399299 PRDX4Q13162 271 aa12.37□□□□□ -0.43
SMIM11A-203ENST00000399299 ZNF829Q3KNS6 432 aaPredicted RBP12.37□□□□□ -0.43
SMIM11A-203ENST00000399299 FAM76BQ5HYJ3 339 aa12.37□□□□□ -0.43
SMIM11A-203ENST00000399299 DOK3Q7L591 496 aa12.37□□□□□ -0.43
SMIM11A-203ENST00000399299 GID4Q8IVV7 300 aa12.37□□□□□ -0.43
SMIM11A-203ENST00000399299 C22orf15Q8WYQ4 148 aa12.37□□□□□ -0.43
SMIM11A-203ENST00000399299 OR5P3Q8WZ94 311 aa12.37□□□□□ -0.43
SMIM11A-203ENST00000399299 TECTBQ96PL2 329 aa12.37□□□□□ -0.43
SMIM11A-203ENST00000399299 CIB1Q99828 191 aa12.37□□□□□ -0.43
SMIM11A-203ENST00000399299 RTL8AQ9BWD3 113 aa12.37□□□□□ -0.43
SMIM11A-203ENST00000399299 GABARAPL3Q9BY60 117 aa12.37□□□□□ -0.43
SMIM11A-203ENST00000399299 HAO2Q9NYQ3 351 aa12.37□□□□□ -0.43
SMIM11A-203ENST00000399299 H2AFY2Q9P0M6 372 aaPredicted RBP12.37□□□□□ -0.43
SMIM11A-203ENST00000399299 ZNF69Q9UC07 566 aa12.37□□□□□ -0.43
SMIM11A-203ENST00000399299 COPS3Q9UNS2 423 aa12.37□□□□□ -0.43
SMIM11A-203ENST00000399299 PRR32B1ATL7 298 aa12.36□□□□□ -0.43
SMIM11A-203ENST00000399299 SRRM5B3KS81 715 aa12.36□□□□□ -0.43
SMIM11A-203ENST00000399299 C22orf46C9J442 243 aa12.36□□□□□ -0.43
SMIM11A-203ENST00000399299 M0R129 80 aa12.36□□□□□ -0.43
SMIM11A-203ENST00000399299 PLATP00750 562 aa12.36□□□□□ -0.43
SMIM11A-203ENST00000399299 IGLV3-1P01715 115 aa12.36□□□□□ -0.43
SMIM11A-203ENST00000399299 LIPFP07098 398 aa12.36□□□□□ -0.43
SMIM11A-203ENST00000399299 EGR1P18146 543 aa12.36□□□□□ -0.43
SMIM11A-203ENST00000399299 MAP2K3P46734 347 aa12.36□□□□□ -0.43
SMIM11A-203ENST00000399299 CSNK2BP67870 215 aa12.36□□□□□ -0.43
SMIM11A-203ENST00000399299 MICBQ29980 383 aa12.36□□□□□ -0.43
SMIM11A-203ENST00000399299 C9orf139Q6ZV77 190 aa12.36□□□□□ -0.43
SMIM11A-203ENST00000399299 BCDIN3DQ7Z5W3 292 aaKnown RBP12.36□□□□□ -0.43
SMIM11A-203ENST00000399299 ZDHHC23Q8IYP9 409 aa12.36□□□□□ -0.43
SMIM11A-203ENST00000399299 ZDHHC22Q8N966 263 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms