RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 PSMA6P60900 246 aaKnown RBP11.16□□□□□ -0.62
VCX3A-202ENST00000398729 UBA52P62987 128 aaKnown RBP11.16□□□□□ -0.62
VCX3A-202ENST00000398729 APOFQ13790 326 aa11.16□□□□□ -0.62
VCX3A-202ENST00000398729 CD276Q5ZPR3 534 aa11.16□□□□□ -0.62
VCX3A-202ENST00000398729 FAHD1Q6P587 224 aa11.16□□□□□ -0.62
VCX3A-202ENST00000398729 KRT77Q7Z794 578 aa11.16□□□□□ -0.62
VCX3A-202ENST00000398729 GCSAMQ8N6F7 178 aa11.16□□□□□ -0.62
VCX3A-202ENST00000398729 OR1M1Q8NGA1 313 aa11.16□□□□□ -0.62
VCX3A-202ENST00000398729 OR5K1Q8NHB7 308 aa11.16□□□□□ -0.62
VCX3A-202ENST00000398729 UTP4Q969X6 686 aaKnown RBP11.16□□□□□ -0.62
VCX3A-202ENST00000398729 PRRG3Q9BZD7 231 aa11.16□□□□□ -0.62
VCX3A-202ENST00000398729 YIPF3Q9GZM5 350 aa11.16□□□□□ -0.62
VCX3A-202ENST00000398729 RNPEPL1Q9HAU8 725 aa11.16□□□□□ -0.62
VCX3A-202ENST00000398729 TVP23BQ9NYZ1 205 aa11.16□□□□□ -0.62
VCX3A-202ENST00000398729 CTSZQ9UBR2 303 aa11.16□□□□□ -0.62
VCX3A-202ENST00000398729 ZNF391Q9UJN7 358 aa11.16□□□□□ -0.62
VCX3A-202ENST00000398729 KLHDC2Q9Y2U9 406 aa11.16□□□□□ -0.62
VCX3A-202ENST00000398729 RHBDD3Q9Y3P4 386 aa11.16□□□□□ -0.62
VCX3A-202ENST00000398729 TRAV40A0A0B4J280 105 aa11.15□□□□□ -0.62
VCX3A-202ENST00000398729 ATP5HO75947 161 aa11.15□□□□□ -0.62
VCX3A-202ENST00000398729 LHBP01229 141 aa11.15□□□□□ -0.62
VCX3A-202ENST00000398729 GYPAP02724 150 aa11.15□□□□□ -0.62
VCX3A-202ENST00000398729 LIPFP07098 398 aa11.15□□□□□ -0.62
VCX3A-202ENST00000398729 IGHV4-38-2P0DP08 117 aa11.15□□□□□ -0.62
VCX3A-202ENST00000398729 DAPP51397 102 aa11.15□□□□□ -0.62
VCX3A-202ENST00000398729 ESRRGP62508 458 aa11.15□□□□□ -0.62
VCX3A-202ENST00000398729 IL5RAQ01344 420 aa11.15□□□□□ -0.62
VCX3A-202ENST00000398729 PTGES3Q15185 160 aaKnown RBP11.15□□□□□ -0.62
VCX3A-202ENST00000398729 TUSC1Q2TAM9 212 aa11.15□□□□□ -0.62
VCX3A-202ENST00000398729 LCN1P1Q5VSP4 162 aa11.15□□□□□ -0.62
VCX3A-202ENST00000398729 TEX36Q5VZQ5 186 aa11.15□□□□□ -0.62
VCX3A-202ENST00000398729 KCTD18Q6PI47 426 aaPredicted RBP11.15□□□□□ -0.62
VCX3A-202ENST00000398729 WDR86Q86TI4 376 aa11.15□□□□□ -0.62
VCX3A-202ENST00000398729 BCL6BQ8N143 479 aaPredicted RBP11.15□□□□□ -0.62
VCX3A-202ENST00000398729 TEAD3Q99594 435 aa11.15□□□□□ -0.62
VCX3A-202ENST00000398729 MICU1Q9BPX6 476 aa11.15□□□□□ -0.62
VCX3A-202ENST00000398729 ABCB9Q9NP78 766 aa11.15□□□□□ -0.62
VCX3A-202ENST00000398729 LRP12Q9Y561 859 aa11.15□□□□□ -0.62
VCX3A-202ENST00000398729 MPC1Q9Y5U8 109 aa11.15□□□□□ -0.62
VCX3A-202ENST00000398729 IGHV3OR16-10A0A075B7F0 116 aa11.14□□□□□ -0.63
VCX3A-202ENST00000398729 C22orf46C9J442 243 aa11.14□□□□□ -0.63
VCX3A-202ENST00000398729 G3V2T6 193 aa11.14□□□□□ -0.63
VCX3A-202ENST00000398729 TNFRSF13BO14836 293 aaPredicted RBP11.14□□□□□ -0.63
VCX3A-202ENST00000398729 PLATP00750 562 aa11.14□□□□□ -0.63
VCX3A-202ENST00000398729 MUC1P15941 1255 aaPredicted RBP11.14□□□□□ -0.63
VCX3A-202ENST00000398729 MTNR1AP48039 350 aa11.14□□□□□ -0.63
VCX3A-202ENST00000398729 HCCSP53701 268 aa11.14□□□□□ -0.63
VCX3A-202ENST00000398729 BAMBIQ13145 260 aa11.14□□□□□ -0.63
VCX3A-202ENST00000398729 ATP6AP1Q15904 470 aa11.14□□□□□ -0.63
VCX3A-202ENST00000398729 MICBQ29980 383 aa11.14□□□□□ -0.63
VCX3A-202ENST00000398729 DEGS2Q6QHC5 323 aa11.14□□□□□ -0.63
VCX3A-202ENST00000398729 C9orf139Q6ZV77 190 aa11.14□□□□□ -0.63
VCX3A-202ENST00000398729 FAM90A1Q86YD7 464 aa11.14□□□□□ -0.63
VCX3A-202ENST00000398729 C11orf53Q8IXP5 236 aa11.14□□□□□ -0.63
VCX3A-202ENST00000398729 GALNT4Q8N4A0 578 aa11.14□□□□□ -0.63
VCX3A-202ENST00000398729 OR8B12Q8NGG6 310 aa11.14□□□□□ -0.63
VCX3A-202ENST00000398729 LRRC29Q8WV35 223 aa11.14□□□□□ -0.63
VCX3A-202ENST00000398729 ZNF48Q96MX3 618 aaPredicted RBP11.14□□□□□ -0.63
VCX3A-202ENST00000398729 RTL8AQ9BWD3 113 aa11.14□□□□□ -0.63
VCX3A-202ENST00000398729 MROQ9BYG7 248 aa11.14□□□□□ -0.63
VCX3A-202ENST00000398729 ZMAT3Q9HA38 289 aaKnown RBP11.14□□□□□ -0.63
VCX3A-202ENST00000398729 KRT84Q9NSB2 600 aa11.14□□□□□ -0.63
VCX3A-202ENST00000398729 TMEM14AQ9Y6G1 99 aa11.14□□□□□ -0.63
VCX3A-202ENST00000398729 IGHV3OR15-7A0A075B7D8 119 aa11.13□□□□□ -0.63
VCX3A-202ENST00000398729 CCDC182A6NF36 153 aa11.13□□□□□ -0.63
VCX3A-202ENST00000398729 DNAJC9-AS1A6NH13 148 aa11.13□□□□□ -0.63
VCX3A-202ENST00000398729 ZNF850A8MQ14 1090 aa11.13□□□□□ -0.63
VCX3A-202ENST00000398729 TMPRSS2O15393 492 aa11.13□□□□□ -0.63
VCX3A-202ENST00000398729 CST4P01036 141 aa11.13□□□□□ -0.63
VCX3A-202ENST00000398729 MRPL3P09001 348 aaKnown RBP11.13□□□□□ -0.63
VCX3A-202ENST00000398729 PRTN3P24158 256 aa11.13□□□□□ -0.63
VCX3A-202ENST00000398729 ACKR3P25106 362 aa11.13□□□□□ -0.63
VCX3A-202ENST00000398729 FASP25445 335 aa11.13□□□□□ -0.63
VCX3A-202ENST00000398729 FGF12P61328 243 aa11.13□□□□□ -0.63
VCX3A-202ENST00000398729 CSNK2BP67870 215 aa11.13□□□□□ -0.63
VCX3A-202ENST00000398729 PRDX4Q13162 271 aa11.13□□□□□ -0.63
VCX3A-202ENST00000398729 C11orf91Q3C1V1 193 aa11.13□□□□□ -0.63
VCX3A-202ENST00000398729 PRR31Q5SQ13 230 aa11.13□□□□□ -0.63
VCX3A-202ENST00000398729 C1orf146Q5VVC0 180 aa11.13□□□□□ -0.63
VCX3A-202ENST00000398729 WDR82Q6UXN9 313 aa11.13□□□□□ -0.63
VCX3A-202ENST00000398729 ZDHHC13Q8IUH4 622 aa11.13□□□□□ -0.63
VCX3A-202ENST00000398729 PNLDC1Q8NA58 520 aaKnown RBP11.13□□□□□ -0.63
VCX3A-202ENST00000398729 FAM81AQ8TBF8 368 aa11.13□□□□□ -0.63
VCX3A-202ENST00000398729 ASB17Q8WXJ9 295 aa11.13□□□□□ -0.63
VCX3A-202ENST00000398729 PIGCQ92535 297 aa11.13□□□□□ -0.63
VCX3A-202ENST00000398729 ITPKCQ96DU7 683 aa11.13□□□□□ -0.63
VCX3A-202ENST00000398729 LYZL4Q96KX0 146 aa11.13□□□□□ -0.63
VCX3A-202ENST00000398729 DUX5Q96PT3 197 aa11.13□□□□□ -0.63
VCX3A-202ENST00000398729 PPP1R3EQ9H7J1 279 aa11.13□□□□□ -0.63
VCX3A-202ENST00000398729 SMURF1Q9HCE7 757 aa11.13□□□□□ -0.63
VCX3A-202ENST00000398729 H2AFY2Q9P0M6 372 aaPredicted RBP11.13□□□□□ -0.63
VCX3A-202ENST00000398729 KAAG1Q9UBP8 84 aa11.13□□□□□ -0.63
VCX3A-202ENST00000398729 AP4S1Q9Y587 144 aa11.13□□□□□ -0.63
VCX3A-202ENST00000398729 TMEM269A0A1B0GVZ9 245 aa11.12□□□□□ -0.63
VCX3A-202ENST00000398729 ACOD1A6NK06 481 aa11.12□□□□□ -0.63
VCX3A-202ENST00000398729 TMEM210A6NLX4 147 aa11.12□□□□□ -0.63
VCX3A-202ENST00000398729 ZNF879B4DU55 563 aa11.12□□□□□ -0.63
VCX3A-202ENST00000398729 PSMD9O00233 223 aa11.12□□□□□ -0.63
VCX3A-202ENST00000398729 DVL1O14640 695 aa11.12□□□□□ -0.63
VCX3A-202ENST00000398729 CDIPTO14735 213 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms