RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 NUFIP2Q7Z417 695 aaKnown RBP5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 UEVLDQ8IX04 471 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 PNLDC1Q8NA58 520 aaKnown RBP5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 SNIP1Q8TAD8 396 aaKnown RBP5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 RNASEH2CQ8TDP1 164 aaKnown RBP5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 MMABQ96EY8 250 aaPredicted RBP5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 ZNF75AQ96N20 296 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 RBFOX1Q9NWB1 397 aaKnown RBP5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 BEX4Q9NWD9 120 aaPredicted RBP5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 FREM2Q5SZK8 3169 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 TBC1D3DA0A087WVF3 549 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 A0A1W2PQF6 199 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 TMEM202A6NGA9 273 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 TBC1D3LB9A6J9 549 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 RFXAPO00287 272 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 AQP7O14520 342 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 SYNGR3O43761 229 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 C1orf105O95561 183 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 SERPINA7P05543 415 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 ITPKBP27987 946 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 HTR2AP28223 471 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 GABRA5P31644 462 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 LIM2P55344 173 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 BAXQ07812 192 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 HSPB3Q12988 150 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 TPBGQ13641 420 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 TBC1D3CQ6IPX1 549 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 TCTN3Q6NUS6 607 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 ZNF613Q6PF04 617 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 PARS2Q7L3T8 475 aaKnown RBP5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 C6orf120Q7Z4R8 191 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 C17orf64Q86WR6 236 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 YAF2Q8IY57 180 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 TBC1D3Q8IZP1 549 aaPredicted RBP5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 OR4K5Q8NGD3 323 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 OR52I1Q8NGK6 324 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 ZNF689Q96CS4 500 aaPredicted RBP5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 ADGRG7Q96K78 797 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 SPAG8Q99932 426 aaPredicted RBP5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 FAAP24Q9BTP7 215 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 PRR14Q9BWN1 585 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 MEGF9Q9H1U4 602 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 DPAGT1Q9H3H5 408 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 CXorf36Q9H7Y0 433 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 JPT1Q9UK76 154 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 EXO1Q9UQ84 846 aaKnown RBP5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 A0A1W2PQM1 296 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 AQP7P3A6NL99 342 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 PRICKLE3O43900 615 aaPredicted RBP5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 ACP2P11117 423 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 DUSP3P51452 185 aaPredicted RBP5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 ERVFC1-1P60608 527 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 SYT14P1Q58G82 188 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 SLC25A30Q5SVS4 291 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 ZNF730Q6ZMV8 503 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 CBLN2Q8IUK8 224 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 RPLP0P6Q8NHW5 317 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 RAB8BQ92930 207 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 SNRNP40Q96DI7 357 aaKnown RBP5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 MRAP2Q96G30 205 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 SLC35G5Q96KT7 338 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 TMEM27Q9HBJ8 222 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 SEMA4GQ9NTN9 838 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 RAB22AQ9UL26 194 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 CDH10Q9Y6N8 788 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 IGSF23A1L1A6 192 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 LRIT2A6NDA9 550 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 LYRM1O43325 122 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 SLC19A2O60779 497 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 CTSVO60911 334 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 MT-ND4P03905 459 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 EGR1P18146 543 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 NTSP30990 170 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 IER5LQ5T953 404 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 FAM69BQ5VUD6 431 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 CNIH2Q6PI25 160 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 CD300LDQ6UXZ3 194 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 TMEM150AQ86TG1 271 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 TMEM123Q8N131 208 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 CISD2Q8N5K1 135 aaKnown RBP5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 IQCF1Q8N6M8 205 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 OR2T4Q8NH00 348 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 M1APQ8TC57 530 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 ZC3HAV1LQ96H79 300 aaKnown RBP5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 ZNF582Q96NG8 517 aaPredicted RBP5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 ERMAPQ96PL5 475 aaPredicted RBP5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 SULT4A1Q9BR01 284 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 TAAR2Q9P1P5 351 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 LOC105369274A0A096LPK9 316 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 LOC102723532A0A0G2JNH3 316 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 CORTO00230 105 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 SLC17A3O00476 420 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 FFAR1O14842 300 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 TSPAN15O95858 294 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 PPIAL4GP0DN37 164 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 TDGF1P13385 188 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 FUT3P21217 361 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 FUT7Q11130 342 aa5.86□□□□□ -1.47
TM9SF4-202ENST00000398022 ZP4Q12836 540 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms