RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 SSX8Q7RTT4 187 aa18.2■□□□□ 0.5
CPNE1-204ENST00000397443 PLPPR2Q96GM1 343 aa18.2■□□□□ 0.5
CPNE1-204ENST00000397443 MARS2Q96GW9 593 aaKnown RBP18.2■□□□□ 0.5
CPNE1-204ENST00000397443 C6orf62Q9GZU0 229 aaPredicted RBP18.2■□□□□ 0.5
CPNE1-204ENST00000397443 CCDC59Q9P031 241 aaKnown RBP18.2■□□□□ 0.5
CPNE1-204ENST00000397443 SPEF1Q9Y4P9 236 aa18.2■□□□□ 0.5
CPNE1-204ENST00000397443 A0A0G2JK05 382 aa18.19■□□□□ 0.5
CPNE1-204ENST00000397443 SULT1B1O43704 296 aa18.19■□□□□ 0.5
CPNE1-204ENST00000397443 RNF224P0DH78 156 aa18.19■□□□□ 0.5
CPNE1-204ENST00000397443 UBE2V2Q15819 145 aa18.19■□□□□ 0.5
CPNE1-204ENST00000397443 FBXW12Q6X9E4 464 aa18.19■□□□□ 0.5
CPNE1-204ENST00000397443 CCDC54Q8NEL0 328 aa18.19■□□□□ 0.5
CPNE1-204ENST00000397443 MCFD2Q8NI22 146 aa18.19■□□□□ 0.5
CPNE1-204ENST00000397443 TRMT10AQ8TBZ6 339 aaKnown RBP18.19■□□□□ 0.5
CPNE1-204ENST00000397443 DVL3Q92997 716 aaPredicted RBP18.19■□□□□ 0.5
CPNE1-204ENST00000397443 CHST5Q9GZS9 411 aa18.19■□□□□ 0.5
CPNE1-204ENST00000397443 PLEKHB1Q9UF11 243 aaPredicted RBP18.19■□□□□ 0.5
CPNE1-204ENST00000397443 CGGBP1Q9UFW8 167 aaPredicted RBP18.19■□□□□ 0.5
CPNE1-204ENST00000397443 A0A0B4J203 849 aa18.19■□□□□ 0.5
CPNE1-204ENST00000397443 ZNF816-ZNF321PA0A0X1KG74 233 aa18.19■□□□□ 0.5
CPNE1-204ENST00000397443 ZNF850A8MQ14 1090 aa18.19■□□□□ 0.5
CPNE1-204ENST00000397443 RGS7BPQ6MZT1 257 aaPredicted RBP18.19■□□□□ 0.5
CPNE1-204ENST00000397443 JAGN1Q8N5M9 183 aa18.19■□□□□ 0.5
CPNE1-204ENST00000397443 OR52N4Q8NGI2 321 aa18.19■□□□□ 0.5
CPNE1-204ENST00000397443 PP6455Q8WZ26 134 aa18.19■□□□□ 0.5
CPNE1-204ENST00000397443 OPA3Q9H6K4 179 aa18.19■□□□□ 0.5
CPNE1-204ENST00000397443 ESRP2Q9H6T0 727 aaKnown RBP18.19■□□□□ 0.5
CPNE1-204ENST00000397443 GPR160Q9UJ42 338 aa18.19■□□□□ 0.5
CPNE1-204ENST00000397443 POU2F3Q9UKI9 436 aa18.19■□□□□ 0.5
CPNE1-204ENST00000397443 V9GY05 133 aa18.19■□□□□ 0.5
CPNE1-204ENST00000397443 COL12A1Q99715 3063 aa18.18■□□□□ 0.5
CPNE1-204ENST00000397443 IGKV1-9A0A0C4DH69 117 aa18.18■□□□□ 0.5
CPNE1-204ENST00000397443 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.18■□□□□ 0.5
CPNE1-204ENST00000397443 DHRS7CA6NNS2 312 aa18.18■□□□□ 0.5
CPNE1-204ENST00000397443 C19orf84I3L1E1 186 aa18.18■□□□□ 0.5
CPNE1-204ENST00000397443 GMDSO60547 372 aa18.18■□□□□ 0.5
CPNE1-204ENST00000397443 HCKP08631 526 aa18.18■□□□□ 0.5
CPNE1-204ENST00000397443 BDKRB2P30411 391 aa18.18■□□□□ 0.5
CPNE1-204ENST00000397443 CLDN12P56749 244 aa18.18■□□□□ 0.5
CPNE1-204ENST00000397443 PSG7Q13046 419 aa18.18■□□□□ 0.5
CPNE1-204ENST00000397443 TMEM255AQ5JRV8 349 aa18.18■□□□□ 0.5
CPNE1-204ENST00000397443 CLVS2Q5SYC1 327 aa18.18■□□□□ 0.5
CPNE1-204ENST00000397443 DDI2Q5TDH0 399 aa18.18■□□□□ 0.5
CPNE1-204ENST00000397443 RNF144BQ7Z419 303 aa18.18■□□□□ 0.5
CPNE1-204ENST00000397443 PIGTQ969N2 578 aa18.18■□□□□ 0.5
CPNE1-204ENST00000397443 PLGRKTQ9HBL7 147 aa18.18■□□□□ 0.5
CPNE1-204ENST00000397443 KCNN3Q9UGI6 736 aa18.18■□□□□ 0.5
CPNE1-204ENST00000397443 DUSP13Q9UII6 198 aa18.18■□□□□ 0.5
CPNE1-204ENST00000397443 DOPEY1Q5JWR5 2465 aa18.18■□□□□ 0.5
CPNE1-204ENST00000397443 NOTOA8MTQ0 251 aa18.17■□□□□ 0.5
CPNE1-204ENST00000397443 NRASP01111 189 aa18.17■□□□□ 0.5
CPNE1-204ENST00000397443 GCH1P30793 250 aa18.17■□□□□ 0.5
CPNE1-204ENST00000397443 MSMPQ1L6U9 139 aa18.17■□□□□ 0.5
CPNE1-204ENST00000397443 ZNF718Q3SXZ3 478 aa18.17■□□□□ 0.5
CPNE1-204ENST00000397443 ZNF404Q494X3 552 aa18.17■□□□□ 0.5
CPNE1-204ENST00000397443 PLCXD3Q63HM9 321 aa18.17■□□□□ 0.5
CPNE1-204ENST00000397443 MOB3CQ70IA8 216 aa18.17■□□□□ 0.5
CPNE1-204ENST00000397443 C10orf35Q96D05 121 aa18.17■□□□□ 0.5
CPNE1-204ENST00000397443 TMEM138Q9NPI0 162 aa18.17■□□□□ 0.5
CPNE1-204ENST00000397443 ATP23Q9Y6H3 246 aa18.17■□□□□ 0.5
CPNE1-204ENST00000397443 UBR5O95071 2799 aaPredicted RBP18.17■□□□□ 0.5
CPNE1-204ENST00000397443 ABCA4P78363 2273 aa18.17■□□□□ 0.5
CPNE1-204ENST00000397443 RAC2P15153 192 aa18.17■□□□□ 0.5
CPNE1-204ENST00000397443 ATF1P18846 271 aa18.17■□□□□ 0.5
CPNE1-204ENST00000397443 NKX6-1P78426 367 aaPredicted RBP18.17■□□□□ 0.5
CPNE1-204ENST00000397443 NCMAPQ5T1S8 102 aa18.16■□□□□ 0.5
CPNE1-204ENST00000397443 ZNF529Q6P280 563 aa18.16■□□□□ 0.5
CPNE1-204ENST00000397443 LRP11Q86VZ4 500 aa18.16■□□□□ 0.5
CPNE1-204ENST00000397443 RFT1Q96AA3 541 aa18.16■□□□□ 0.5
CPNE1-204ENST00000397443 HAVCR1Q96D42 359 aa18.16■□□□□ 0.5
CPNE1-204ENST00000397443 SYT3Q9BQG1 590 aa18.16■□□□□ 0.5
CPNE1-204ENST00000397443 FAM230AA0A1W2PPH8 454 aa18.15■□□□□ 0.5
CPNE1-204ENST00000397443 IFITM5A6NNB3 132 aa18.15■□□□□ 0.5
CPNE1-204ENST00000397443 ANKRD30BLA7E2S9 258 aa18.15■□□□□ 0.5
CPNE1-204ENST00000397443 MAGEB3O15480 346 aa18.15■□□□□ 0.5
CPNE1-204ENST00000397443 TIMM8AO60220 97 aaPredicted RBP18.15■□□□□ 0.5
CPNE1-204ENST00000397443 CLPXO76031 633 aa18.15■□□□□ 0.5
CPNE1-204ENST00000397443 PAHP00439 452 aa18.15■□□□□ 0.5
CPNE1-204ENST00000397443 CA6P23280 308 aa18.15■□□□□ 0.5
CPNE1-204ENST00000397443 AZGP1P25311 298 aaKnown RBP18.15■□□□□ 0.5
CPNE1-204ENST00000397443 BMXP51813 675 aa18.15■□□□□ 0.5
CPNE1-204ENST00000397443 PRDX4Q13162 271 aa18.15■□□□□ 0.5
CPNE1-204ENST00000397443 GLT8D1Q68CQ7 371 aa18.15■□□□□ 0.5
CPNE1-204ENST00000397443 UTS2BQ765I0 119 aa18.15■□□□□ 0.5
CPNE1-204ENST00000397443 FTMTQ8N4E7 242 aa18.15■□□□□ 0.5
CPNE1-204ENST00000397443 CSNK2A3Q8NEV1 391 aa18.15■□□□□ 0.5
CPNE1-204ENST00000397443 UBASH3BQ8TF42 649 aa18.15■□□□□ 0.5
CPNE1-204ENST00000397443 COMMD3Q9UBI1 195 aa18.15■□□□□ 0.5
CPNE1-204ENST00000397443 RGS5O15539 181 aa18.15■□□□□ 0.5
CPNE1-204ENST00000397443 SIAH2O43255 324 aa18.15■□□□□ 0.5
CPNE1-204ENST00000397443 GLRXP35754 106 aa18.15■□□□□ 0.5
CPNE1-204ENST00000397443 KIR2DL3P43628 341 aa18.15■□□□□ 0.5
CPNE1-204ENST00000397443 OR5D18Q8NGL1 313 aa18.15■□□□□ 0.5
CPNE1-204ENST00000397443 TMEM171Q8WVE6 324 aa18.15■□□□□ 0.5
CPNE1-204ENST00000397443 DACH2Q96NX9 599 aa18.15■□□□□ 0.5
CPNE1-204ENST00000397443 GPER1Q99527 375 aa18.15■□□□□ 0.5
CPNE1-204ENST00000397443 PURGQ9UJV8 347 aaKnown RBP18.15■□□□□ 0.5
CPNE1-204ENST00000397443 PKDREJQ9NTG1 2253 aa18.15■□□□□ 0.5
CPNE1-204ENST00000397443 LRRK2Q5S007 2527 aa18.14■□□□□ 0.5
CPNE1-204ENST00000397443 CTDSP2O14595 271 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms