RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 PRSS12P56730 875 aa11.66□□□□□ -0.54
SEC13-204ENST00000397099 EGR3Q06889 387 aa11.66□□□□□ -0.54
SEC13-204ENST00000397099 MPPED2Q15777 294 aa11.66□□□□□ -0.54
SEC13-204ENST00000397099 GFOD2Q3B7J2 385 aa11.66□□□□□ -0.54
SEC13-204ENST00000397099 ARMCX4Q5H9R4 360 aa11.66□□□□□ -0.54
SEC13-204ENST00000397099 AADACL4Q5VUY2 407 aa11.66□□□□□ -0.54
SEC13-204ENST00000397099 PRAMEF6Q5VXH4 476 aa11.66□□□□□ -0.54
SEC13-204ENST00000397099 C1orf229Q6ZS94 237 aaPredicted RBP11.66□□□□□ -0.54
SEC13-204ENST00000397099 KRT74Q7RTS7 529 aa11.66□□□□□ -0.54
SEC13-204ENST00000397099 AMIGO2Q86SJ2 522 aa11.66□□□□□ -0.54
SEC13-204ENST00000397099 BPIFB2Q8N4F0 458 aa11.66□□□□□ -0.54
SEC13-204ENST00000397099 TCEANCQ8N8B7 351 aa11.66□□□□□ -0.54
SEC13-204ENST00000397099 DEFB108BQ8NET1 73 aa11.66□□□□□ -0.54
SEC13-204ENST00000397099 OR8J1Q8NGP2 316 aa11.66□□□□□ -0.54
SEC13-204ENST00000397099 TRUB1Q8WWH5 349 aaKnown RBP11.66□□□□□ -0.54
SEC13-204ENST00000397099 RAB40AQ8WXH6 277 aa11.66□□□□□ -0.54
SEC13-204ENST00000397099 LRTOMTQ8WZ04 291 aa11.66□□□□□ -0.54
SEC13-204ENST00000397099 HIST1H2AAQ96QV6 131 aa11.66□□□□□ -0.54
SEC13-204ENST00000397099 CIB1Q99828 191 aa11.66□□□□□ -0.54
SEC13-204ENST00000397099 PAPOLGQ9BWT3 736 aaKnown RBP11.66□□□□□ -0.54
SEC13-204ENST00000397099 GABARAPL3Q9BY60 117 aa11.66□□□□□ -0.54
SEC13-204ENST00000397099 BRD7Q9NPI1 651 aa11.66□□□□□ -0.54
SEC13-204ENST00000397099 C1orf123Q9NWV4 160 aa11.66□□□□□ -0.54
SEC13-204ENST00000397099 CLN6Q9NWW5 311 aa11.66□□□□□ -0.54
SEC13-204ENST00000397099 ERVK-18Q9QC07 812 aa11.66□□□□□ -0.54
SEC13-204ENST00000397099 OAZ3Q9UMX2 235 aa11.66□□□□□ -0.54
SEC13-204ENST00000397099 ARHGAP32A7KAX9 2087 aa11.66□□□□□ -0.54
SEC13-204ENST00000397099 IGHV3-64DA0A0J9YX35 117 aa11.65□□□□□ -0.54
SEC13-204ENST00000397099 KIR2DS1A0A191URI9 304 aa11.65□□□□□ -0.54
SEC13-204ENST00000397099 hCG_1807616A0A1W2PRN6 198 aa11.65□□□□□ -0.54
SEC13-204ENST00000397099 CCDC182A6NF36 153 aa11.65□□□□□ -0.54
SEC13-204ENST00000397099 TRAPPC2LH3BP13 241 aa11.65□□□□□ -0.54
SEC13-204ENST00000397099 EBAG9O00559 213 aa11.65□□□□□ -0.54
SEC13-204ENST00000397099 RGS9O75916 674 aaPredicted RBP11.65□□□□□ -0.54
SEC13-204ENST00000397099 AVPP01185 164 aa11.65□□□□□ -0.54
SEC13-204ENST00000397099 FSHBP01225 129 aa11.65□□□□□ -0.54
SEC13-204ENST00000397099 LHBP01229 141 aa11.65□□□□□ -0.54
SEC13-204ENST00000397099 GRPP07492 148 aa11.65□□□□□ -0.54
SEC13-204ENST00000397099 BPIFB3P59826 476 aa11.65□□□□□ -0.54
SEC13-204ENST00000397099 HILS1P60008 231 aa11.65□□□□□ -0.54
SEC13-204ENST00000397099 CDC42P60953 191 aa11.65□□□□□ -0.54
SEC13-204ENST00000397099 PAX8Q06710 450 aa11.65□□□□□ -0.54
SEC13-204ENST00000397099 MICBQ29980 383 aa11.65□□□□□ -0.54
SEC13-204ENST00000397099 RBMS3Q6XE24 437 aaKnown RBP11.65□□□□□ -0.54
SEC13-204ENST00000397099 OR1M1Q8NGA1 313 aa11.65□□□□□ -0.54
SEC13-204ENST00000397099 OR8B12Q8NGG6 310 aa11.65□□□□□ -0.54
SEC13-204ENST00000397099 OR10Z1Q8NGY1 313 aa11.65□□□□□ -0.54
SEC13-204ENST00000397099 FAM81AQ8TBF8 368 aa11.65□□□□□ -0.54
SEC13-204ENST00000397099 C12orf43Q96C57 262 aaKnown RBP11.65□□□□□ -0.54
SEC13-204ENST00000397099 DMRTB1Q96MA1 342 aa11.65□□□□□ -0.54
SEC13-204ENST00000397099 OR8B4Q96RC9 309 aa11.65□□□□□ -0.54
SEC13-204ENST00000397099 TLNRD1Q9H1K6 362 aa11.65□□□□□ -0.54
SEC13-204ENST00000397099 MMP26Q9NRE1 261 aa11.65□□□□□ -0.54
SEC13-204ENST00000397099 KAAG1Q9UBP8 84 aa11.65□□□□□ -0.54
SEC13-204ENST00000397099 OPN4Q9UHM6 478 aa11.65□□□□□ -0.54
SEC13-204ENST00000397099 NUP50Q9UKX7 468 aa11.65□□□□□ -0.54
SEC13-204ENST00000397099 IGHV2-70DA0A0C4DH43 119 aa11.64□□□□□ -0.55
SEC13-204ENST00000397099 ZNF816-ZNF321PA0A0X1KG74 233 aa11.64□□□□□ -0.55
SEC13-204ENST00000397099 C5orf63A6NC05 138 aa11.64□□□□□ -0.55
SEC13-204ENST00000397099 ZNF670-ZNF695F2Z2N8 137 aa11.64□□□□□ -0.55
SEC13-204ENST00000397099 TRIM77I1YAP6 450 aa11.64□□□□□ -0.55
SEC13-204ENST00000397099 GPR37O15354 613 aa11.64□□□□□ -0.55
SEC13-204ENST00000397099 ENSAO43768 121 aaKnown RBP11.64□□□□□ -0.55
SEC13-204ENST00000397099 MITFO75030 526 aaPredicted RBP11.64□□□□□ -0.55
SEC13-204ENST00000397099 ECDO95905 644 aaPredicted RBP11.64□□□□□ -0.55
SEC13-204ENST00000397099 PAX2Q02962 417 aa11.64□□□□□ -0.55
SEC13-204ENST00000397099 FAM76BQ5HYJ3 339 aa11.64□□□□□ -0.55
SEC13-204ENST00000397099 TEX36Q5VZQ5 186 aa11.64□□□□□ -0.55
SEC13-204ENST00000397099 WDR25Q64LD2 544 aaPredicted RBP11.64□□□□□ -0.55
SEC13-204ENST00000397099 ZNF322Q6U7Q0 402 aaPredicted RBP11.64□□□□□ -0.55
SEC13-204ENST00000397099 PNLDC1Q8NA58 520 aaKnown RBP11.64□□□□□ -0.55
SEC13-204ENST00000397099 ITPKCQ96DU7 683 aa11.64□□□□□ -0.55
SEC13-204ENST00000397099 MYCBPQ99417 103 aaPredicted RBP11.64□□□□□ -0.55
SEC13-204ENST00000397099 DNTTIP1Q9H147 329 aa11.64□□□□□ -0.55
SEC13-204ENST00000397099 ZMAT3Q9HA38 289 aaKnown RBP11.64□□□□□ -0.55
SEC13-204ENST00000397099 FAM206AQ9NX38 181 aa11.64□□□□□ -0.55
SEC13-204ENST00000397099 ZNF319Q9P2F9 582 aa11.64□□□□□ -0.55
SEC13-204ENST00000397099 NUFIP1Q9UHK0 495 aaKnown RBP11.64□□□□□ -0.55
SEC13-204ENST00000397099 IKZF2Q9UKS7 526 aa11.64□□□□□ -0.55
SEC13-204ENST00000397099 KLHDC2Q9Y2U9 406 aa11.64□□□□□ -0.55
SEC13-204ENST00000397099 RHBDD3Q9Y3P4 386 aa11.64□□□□□ -0.55
SEC13-204ENST00000397099 SNTNA6NMZ2 147 aa11.63□□□□□ -0.55
SEC13-204ENST00000397099 DHRS7CA6NNS2 312 aa11.63□□□□□ -0.55
SEC13-204ENST00000397099 ZNF205O95201 554 aa11.63□□□□□ -0.55
SEC13-204ENST00000397099 VENTXO95231 258 aa11.63□□□□□ -0.55
SEC13-204ENST00000397099 MRPL3P09001 348 aaKnown RBP11.63□□□□□ -0.55
SEC13-204ENST00000397099 OR2T7P0C7T2 308 aa11.63□□□□□ -0.55
SEC13-204ENST00000397099 HTR1FP30939 366 aa11.63□□□□□ -0.55
SEC13-204ENST00000397099 CXCR4P61073 352 aa11.63□□□□□ -0.55
SEC13-204ENST00000397099 SEC61A1P61619 476 aaKnown RBP11.63□□□□□ -0.55
SEC13-204ENST00000397099 RIPPLY1Q0D2K3 151 aa11.63□□□□□ -0.55
SEC13-204ENST00000397099 ZNF841Q6ZN19 808 aa11.63□□□□□ -0.55
SEC13-204ENST00000397099 SLC36A1Q7Z2H8 476 aa11.63□□□□□ -0.55
SEC13-204ENST00000397099 THAP5Q7Z6K1 395 aa11.63□□□□□ -0.55
SEC13-204ENST00000397099 SLC35F2Q8IXU6 374 aa11.63□□□□□ -0.55
SEC13-204ENST00000397099 ZDHHC23Q8IYP9 409 aa11.63□□□□□ -0.55
SEC13-204ENST00000397099 GCSAMQ8N6F7 178 aa11.63□□□□□ -0.55
SEC13-204ENST00000397099 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.63□□□□□ -0.55
SEC13-204ENST00000397099 CCDC54Q8NEL0 328 aa11.63□□□□□ -0.55
SEC13-204ENST00000397099 SEMA6DQ8NFY4 1073 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms