RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 GHRLQ9UBU3 117 aa16.31■□□□□ 0.2
SIL1-202ENST00000394817 PCDHGA1Q9Y5H4 931 aa16.31■□□□□ 0.2
SIL1-202ENST00000394817 PINLYPA6NC86 204 aa16.3■□□□□ 0.2
SIL1-202ENST00000394817 HMSDA8MTL9 139 aa16.3■□□□□ 0.2
SIL1-202ENST00000394817 TRAPPC6AO75865 159 aa16.3■□□□□ 0.2
SIL1-202ENST00000394817 CSN2P05814 226 aa16.3■□□□□ 0.2
SIL1-202ENST00000394817 DBHP09172 617 aa16.3■□□□□ 0.2
SIL1-202ENST00000394817 CST2P09228 141 aa16.3■□□□□ 0.2
SIL1-202ENST00000394817 HIST1H1DP16402 221 aaKnown RBP16.3■□□□□ 0.2
SIL1-202ENST00000394817 POU3F2P20265 443 aaPredicted RBP16.3■□□□□ 0.2
SIL1-202ENST00000394817 CNR1P21554 472 aa16.3■□□□□ 0.2
SIL1-202ENST00000394817 NFYAP23511 347 aaPredicted RBP16.3■□□□□ 0.2
SIL1-202ENST00000394817 HOXD11P31277 338 aaPredicted RBP16.3■□□□□ 0.2
SIL1-202ENST00000394817 GFRA1P56159 465 aa16.3■□□□□ 0.2
SIL1-202ENST00000394817 CXADRP78310 365 aa16.3■□□□□ 0.2
SIL1-202ENST00000394817 EXOSC2Q13868 293 aaKnown RBP16.3■□□□□ 0.2
SIL1-202ENST00000394817 KISS1Q15726 138 aa16.3■□□□□ 0.2
SIL1-202ENST00000394817 NKPD1Q17RQ9 610 aa16.3■□□□□ 0.2
SIL1-202ENST00000394817 SLC22A6Q4U2R8 563 aa16.3■□□□□ 0.2
SIL1-202ENST00000394817 RTN4RL2Q86UN3 420 aa16.3■□□□□ 0.2
SIL1-202ENST00000394817 CD163Q86VB7 1156 aa16.3■□□□□ 0.2
SIL1-202ENST00000394817 DTX1Q86Y01 620 aa16.3■□□□□ 0.2
SIL1-202ENST00000394817 ZDHHC22Q8N966 263 aa16.3■□□□□ 0.2
SIL1-202ENST00000394817 PRSS33Q8NF86 280 aa16.3■□□□□ 0.2
SIL1-202ENST00000394817 CPT1CQ8TCG5 803 aa16.3■□□□□ 0.2
SIL1-202ENST00000394817 SLC39A7Q92504 469 aa16.3■□□□□ 0.2
SIL1-202ENST00000394817 MRGPRFQ96AM1 343 aa16.3■□□□□ 0.2
SIL1-202ENST00000394817 ZNF775Q96BV0 537 aaPredicted RBP16.3■□□□□ 0.2
SIL1-202ENST00000394817 RAB3CQ96E17 227 aa16.3■□□□□ 0.2
SIL1-202ENST00000394817 THOC3Q96J01 351 aaKnown RBP16.3■□□□□ 0.2
SIL1-202ENST00000394817 CRLF2Q9HC73 371 aa16.3■□□□□ 0.2
SIL1-202ENST00000394817 TMEM38BQ9NVV0 291 aa16.3■□□□□ 0.2
SIL1-202ENST00000394817 VSIG4Q9Y279 399 aa16.3■□□□□ 0.2
SIL1-202ENST00000394817 SGCEO43556 437 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 NOS1APO75052 506 aaPredicted RBP16.29■□□□□ 0.2
SIL1-202ENST00000394817 MTRF1O75570 445 aaKnown RBP16.29■□□□□ 0.2
SIL1-202ENST00000394817 FAHP16930 419 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 HRH1P35367 487 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 CLDN15P56746 228 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 RIPPLY1Q0D2K3 151 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 DHRS2Q13268 280 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 OPCMLQ14982 345 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 PLAC9Q5JTB6 97 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 JMJD6Q6NYC1 403 aaPredicted RBP16.29■□□□□ 0.2
SIL1-202ENST00000394817 C12orf45Q8N5I9 185 aaPredicted RBP16.29■□□□□ 0.2
SIL1-202ENST00000394817 OR56B1Q8NGI3 324 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 OR52H1Q8NGJ2 320 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 URM1Q9BTM9 101 aaKnown RBP16.29■□□□□ 0.2
SIL1-202ENST00000394817 GPR87Q9BY21 358 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 IRF2BPLQ9H1B7 796 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 BANF2Q9H503 90 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 BOKQ9UMX3 212 aaPredicted RBP16.29■□□□□ 0.2
SIL1-202ENST00000394817 A0A1W2PP11 408 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 C21orf140B9A014 251 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 MCRIP1C9JLW8 97 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 L7N2F9 121 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 TERTO14746 1132 aaKnown RBP16.29■□□□□ 0.2
SIL1-202ENST00000394817 SOCS1O15524 211 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 SYNGR3O43761 229 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 NAT2P11245 290 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 NAT1P18440 290 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 PTGFRP43088 359 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 STARP49675 285 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 UBE2V2Q15819 145 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 PNLIPRP3Q17RR3 467 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 C11orf88Q6PI97 169 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 DRAM2Q6UX65 266 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 AAED1Q7RTV5 226 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 OR8H3Q8N146 312 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 DEFB124Q8NES8 71 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 ROBO4Q8WZ75 1007 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 CPNE4Q96A23 557 aaPredicted RBP16.29■□□□□ 0.2
SIL1-202ENST00000394817 CST11Q9H112 138 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 OR10A2Q9H208 303 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 LRFN1Q9P244 771 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 UBQLN2Q9UHD9 624 aa16.29■□□□□ 0.2
SIL1-202ENST00000394817 LINC00862A6NCI5 91 aa16.28■□□□□ 0.2
SIL1-202ENST00000394817 OR6C65A6NJZ3 312 aa16.28■□□□□ 0.2
SIL1-202ENST00000394817 DHRS7CA6NNS2 312 aa16.28■□□□□ 0.2
SIL1-202ENST00000394817 MFNGO00587 321 aa16.28■□□□□ 0.2
SIL1-202ENST00000394817 CRTAPO75718 401 aaPredicted RBP16.28■□□□□ 0.2
SIL1-202ENST00000394817 DLSTP36957 453 aa16.28■□□□□ 0.2
SIL1-202ENST00000394817 CD96P40200 585 aa16.28■□□□□ 0.2
SIL1-202ENST00000394817 TMEM50BP56557 158 aa16.28■□□□□ 0.2
SIL1-202ENST00000394817 SEC61A1P61619 476 aaKnown RBP16.28■□□□□ 0.2
SIL1-202ENST00000394817 SCRN3Q0VDG4 424 aa16.28■□□□□ 0.2
SIL1-202ENST00000394817 SNAI3Q3KNW1 292 aa16.28■□□□□ 0.2
SIL1-202ENST00000394817 RIPPLY2Q5TAB7 128 aa16.28■□□□□ 0.2
SIL1-202ENST00000394817 SLC25A42Q86VD7 318 aa16.28■□□□□ 0.2
SIL1-202ENST00000394817 FAM89BQ8N5H3 189 aa16.28■□□□□ 0.2
SIL1-202ENST00000394817 ALKBH3Q96Q83 286 aaPredicted RBP16.28■□□□□ 0.2
SIL1-202ENST00000394817 PIGLQ9Y2B2 252 aa16.28■□□□□ 0.2
SIL1-202ENST00000394817 CYTIPO60759 359 aa16.27■□□□□ 0.2
SIL1-202ENST00000394817 RPS27AP62979 156 aaKnown RBP16.27■□□□□ 0.2
SIL1-202ENST00000394817 LY6G6FQ5SQ64 297 aa16.27■□□□□ 0.2
SIL1-202ENST00000394817 CLVS2Q5SYC1 327 aa16.27■□□□□ 0.2
SIL1-202ENST00000394817 TMEM164Q5U3C3 297 aa16.27■□□□□ 0.2
SIL1-202ENST00000394817 C17orf107Q6ZR85 190 aa16.27■□□□□ 0.2
SIL1-202ENST00000394817 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.27■□□□□ 0.2
SIL1-202ENST00000394817 RPS10-NUDT3A0A1W2PQS6 291 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms