RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 LHFPL3Q86UP9 236 aa16.03■□□□□ 0.16
PDLIM7-204ENST00000393546 CATSPERDQ86XM0 798 aa16.03■□□□□ 0.16
PDLIM7-204ENST00000393546 EGFL6Q8IUX8 553 aa16.03■□□□□ 0.16
PDLIM7-204ENST00000393546 SEMA6DQ8NFY4 1073 aa16.03■□□□□ 0.16
PDLIM7-204ENST00000393546 CLDND2Q8NHS1 167 aa16.03■□□□□ 0.16
PDLIM7-204ENST00000393546 ZNF420Q8TAQ5 688 aaPredicted RBP16.03■□□□□ 0.16
PDLIM7-204ENST00000393546 TFAP2CQ92754 450 aa16.03■□□□□ 0.16
PDLIM7-204ENST00000393546 DVL3Q92997 716 aaPredicted RBP16.03■□□□□ 0.16
PDLIM7-204ENST00000393546 ABCB9Q9NP78 766 aa16.03■□□□□ 0.16
PDLIM7-204ENST00000393546 DCAF16Q9NXF7 216 aa16.03■□□□□ 0.16
PDLIM7-204ENST00000393546 SLC22A13Q9Y226 551 aa16.03■□□□□ 0.16
PDLIM7-204ENST00000393546 TLN2Q9Y4G6 2542 aa16.03■□□□□ 0.16
PDLIM7-204ENST00000393546 ZNF816-ZNF321PA0A0X1KG74 233 aa16.02■□□□□ 0.16
PDLIM7-204ENST00000393546 IRGMA1A4Y4 181 aa16.02■□□□□ 0.16
PDLIM7-204ENST00000393546 ANXA2P2A6NMY6 339 aa16.02■□□□□ 0.16
PDLIM7-204ENST00000393546 TMEM178BH3BS89 294 aa16.02■□□□□ 0.16
PDLIM7-204ENST00000393546 J3QLW9 94 aa16.02■□□□□ 0.16
PDLIM7-204ENST00000393546 WNT9BO14905 357 aa16.02■□□□□ 0.16
PDLIM7-204ENST00000393546 IGHA1P01876 353 aa16.02■□□□□ 0.16
PDLIM7-204ENST00000393546 IRF2P14316 349 aa16.02■□□□□ 0.16
PDLIM7-204ENST00000393546 ZNF19P17023 458 aa16.02■□□□□ 0.16
PDLIM7-204ENST00000393546 PSMB10P40306 273 aa16.02■□□□□ 0.16
PDLIM7-204ENST00000393546 OR12D2P58182 307 aa16.02■□□□□ 0.16
PDLIM7-204ENST00000393546 RIPK1Q13546 671 aa16.02■□□□□ 0.16
PDLIM7-204ENST00000393546 ZNF181Q2M3W8 571 aa16.02■□□□□ 0.16
PDLIM7-204ENST00000393546 PRAMEF6Q5VXH4 476 aa16.02■□□□□ 0.16
PDLIM7-204ENST00000393546 THAP5Q7Z6K1 395 aa16.02■□□□□ 0.16
PDLIM7-204ENST00000393546 C1orf87Q8N0U7 546 aa16.02■□□□□ 0.16
PDLIM7-204ENST00000393546 OR11L1Q8NGX0 322 aa16.02■□□□□ 0.16
PDLIM7-204ENST00000393546 PIGCQ92535 297 aa16.02■□□□□ 0.16
PDLIM7-204ENST00000393546 HIST1H2AAQ96QV6 131 aa16.02■□□□□ 0.16
PDLIM7-204ENST00000393546 MICU1Q9BPX6 476 aa16.02■□□□□ 0.16
PDLIM7-204ENST00000393546 ALG8Q9BVK2 526 aa16.02■□□□□ 0.16
PDLIM7-204ENST00000393546 FN3KRPQ9HA64 309 aa16.02■□□□□ 0.16
PDLIM7-204ENST00000393546 FGF20Q9NP95 211 aaPredicted RBP16.02■□□□□ 0.16
PDLIM7-204ENST00000393546 UFSP2Q9NUQ7 469 aa16.02■□□□□ 0.16
PDLIM7-204ENST00000393546 ACOXLQ9NUZ1 547 aa16.02■□□□□ 0.16
PDLIM7-204ENST00000393546 LOC100289279A0A1B0GTE1 492 aa16.01■□□□□ 0.15
PDLIM7-204ENST00000393546 ISPDA4D126 451 aa16.01■□□□□ 0.15
PDLIM7-204ENST00000393546 ZNF850A8MQ14 1090 aa16.01■□□□□ 0.15
PDLIM7-204ENST00000393546 P2RY10O00398 339 aa16.01■□□□□ 0.15
PDLIM7-204ENST00000393546 DHRS3O75911 302 aa16.01■□□□□ 0.15
PDLIM7-204ENST00000393546 PTBP3O95758 552 aaKnown RBP16.01■□□□□ 0.15
PDLIM7-204ENST00000393546 GRPP07492 148 aa16.01■□□□□ 0.15
PDLIM7-204ENST00000393546 GNAO1P09471 354 aa16.01■□□□□ 0.15
PDLIM7-204ENST00000393546 PMELP40967 661 aa16.01■□□□□ 0.15
PDLIM7-204ENST00000393546 PRDX4Q13162 271 aa16.01■□□□□ 0.15
PDLIM7-204ENST00000393546 MPPED2Q15777 294 aa16.01■□□□□ 0.15
PDLIM7-204ENST00000393546 DOK3Q7L591 496 aa16.01■□□□□ 0.15
PDLIM7-204ENST00000393546 Q8TCH9 128 aa16.01■□□□□ 0.15
PDLIM7-204ENST00000393546 C4orf36Q96KX1 117 aa16.01■□□□□ 0.15
PDLIM7-204ENST00000393546 YAE1D1Q9NRH1 226 aa16.01■□□□□ 0.15
PDLIM7-204ENST00000393546 ERVK13-1Q9NX77 482 aa16.01■□□□□ 0.15
PDLIM7-204ENST00000393546 PIGLQ9Y2B2 252 aa16.01■□□□□ 0.15
PDLIM7-204ENST00000393546 A0A1B0GTI1 187 aa16■□□□□ 0.15
PDLIM7-204ENST00000393546 A0A1B0GVI7 797 aa16■□□□□ 0.15
PDLIM7-204ENST00000393546 ATP6V1G2O95670 118 aa16■□□□□ 0.15
PDLIM7-204ENST00000393546 CYB5R3P00387 301 aaPredicted RBP16■□□□□ 0.15
PDLIM7-204ENST00000393546 HTR1AP08908 422 aa16■□□□□ 0.15
PDLIM7-204ENST00000393546 DCKP27707 260 aa16■□□□□ 0.15
PDLIM7-204ENST00000393546 IL2RGP31785 369 aa16■□□□□ 0.15
PDLIM7-204ENST00000393546 AQP4P55087 323 aa16■□□□□ 0.15
PDLIM7-204ENST00000393546 LMO4P61968 165 aa16■□□□□ 0.15
PDLIM7-204ENST00000393546 HNRNPA0Q13151 305 aaKnown RBP16■□□□□ 0.15
PDLIM7-204ENST00000393546 ODF4Q2M2E3 257 aa16■□□□□ 0.15
PDLIM7-204ENST00000393546 C6orf52Q5T4I8 152 aa16■□□□□ 0.15
PDLIM7-204ENST00000393546 ZBTB37Q5TC79 503 aa16■□□□□ 0.15
PDLIM7-204ENST00000393546 KRT74Q7RTS7 529 aa16■□□□□ 0.15
PDLIM7-204ENST00000393546 SYS1Q8N2H4 156 aa16■□□□□ 0.15
PDLIM7-204ENST00000393546 MSI2Q96DH6 328 aaKnown RBP16■□□□□ 0.15
PDLIM7-204ENST00000393546 GAL3ST1Q99999 423 aa16■□□□□ 0.15
PDLIM7-204ENST00000393546 RTL8AQ9BWD3 113 aa16■□□□□ 0.15
PDLIM7-204ENST00000393546 PPP1R3EQ9H7J1 279 aa16■□□□□ 0.15
PDLIM7-204ENST00000393546 ENPP5Q9UJA9 477 aa16■□□□□ 0.15
PDLIM7-204ENST00000393546 A6NLC8 198 aa15.99■□□□□ 0.15
PDLIM7-204ENST00000393546 IGHV2-70P01814 119 aa15.99■□□□□ 0.15
PDLIM7-204ENST00000393546 RBMXP38159 391 aaKnown RBP15.99■□□□□ 0.15
PDLIM7-204ENST00000393546 BTG1P62324 171 aa15.99■□□□□ 0.15
PDLIM7-204ENST00000393546 WDR38Q5JTN6 314 aa15.99■□□□□ 0.15
PDLIM7-204ENST00000393546 FDX2Q6P4F2 183 aa15.99■□□□□ 0.15
PDLIM7-204ENST00000393546 LRRC28Q86X40 367 aaPredicted RBP15.99■□□□□ 0.15
PDLIM7-204ENST00000393546 ZDHHC23Q8IYP9 409 aa15.99■□□□□ 0.15
PDLIM7-204ENST00000393546 PRSS35Q8N3Z0 413 aa15.99■□□□□ 0.15
PDLIM7-204ENST00000393546 LINC01356Q8N9X3 169 aa15.99■□□□□ 0.15
PDLIM7-204ENST00000393546 CCDC54Q8NEL0 328 aa15.99■□□□□ 0.15
PDLIM7-204ENST00000393546 OR14K1Q8NGZ2 314 aa15.99■□□□□ 0.15
PDLIM7-204ENST00000393546 OR2G2Q8NGZ5 317 aa15.99■□□□□ 0.15
PDLIM7-204ENST00000393546 OR5P3Q8WZ94 311 aa15.99■□□□□ 0.15
PDLIM7-204ENST00000393546 RAB39BQ96DA2 213 aa15.99■□□□□ 0.15
PDLIM7-204ENST00000393546 ITPKCQ96DU7 683 aa15.99■□□□□ 0.15
PDLIM7-204ENST00000393546 PELI1Q96FA3 418 aa15.99■□□□□ 0.15
PDLIM7-204ENST00000393546 C1orf159Q96HA4 380 aa15.99■□□□□ 0.15
PDLIM7-204ENST00000393546 JAM3Q9BX67 310 aa15.99■□□□□ 0.15
PDLIM7-204ENST00000393546 ZNF665Q9H7R5 613 aa15.99■□□□□ 0.15
PDLIM7-204ENST00000393546 C1orf123Q9NWV4 160 aa15.99■□□□□ 0.15
PDLIM7-204ENST00000393546 RNF7Q9UBF6 113 aa15.99■□□□□ 0.15
PDLIM7-204ENST00000393546 V9GYS6 101 aa15.99■□□□□ 0.15
PDLIM7-204ENST00000393546 HIVEP2P31629 2446 aa15.99■□□□□ 0.15
PDLIM7-204ENST00000393546 DHRS7CA6NNS2 312 aa15.98■□□□□ 0.15
PDLIM7-204ENST00000393546 SYT7O43581 403 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms