RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 ZDHHC3Q9NYG2 299 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 NEUROG3Q9Y4Z2 214 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 TRAV27A0A087WT01 109 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 C1orf226A1L170 272 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 NPIPB8E9PQR5 432 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 APOA2P02652 100 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 FCGR3AP08637 254 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 H2BFMP0C1H6 154 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 CD46P15529 392 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 PRLHRP49683 370 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 SLC37A1P57057 533 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 SPOCK1Q08629 439 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 C2orf76Q3KRA6 126 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 TMEM128Q5BJH2 165 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 FBXW12Q6X9E4 464 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 TMEM184AQ6ZMB5 413 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 MRPL52Q86TS9 123 aaKnown RBP6.86□□□□□ -1.31
VTI1A-201ENST00000393077 FAM219AQ8IW50 185 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 SLC39A11Q8N1S5 342 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 ZNF619Q8N2I2 560 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 ZDHHC22Q8N966 263 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 PSMF1Q92530 271 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 STACQ99469 402 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 SLC46A2Q9BY10 475 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 HSPB7Q9UBY9 170 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 TBX21Q9UL17 535 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 FOCADQ5VW36 1801 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 A0A087WUJ7 227 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 M0QZ24 198 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 HCRTR2O43614 444 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 C1QL1O75973 258 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 TIMP1P01033 207 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 FURINP09958 794 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 PNLIPP16233 465 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 ZNF136P52737 540 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 CSNK2A1P68400 391 aaPredicted RBP6.86□□□□□ -1.31
VTI1A-201ENST00000393077 MMDQ15546 238 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 ZNF385BQ569K4 471 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 LY6G6FQ5SQ64 297 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 TMEM268Q5VZI3 342 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 SLC8B1Q6J4K2 584 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 TEX38Q6PEX7 206 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 SYT13Q7L8C5 426 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 TSEN54Q7Z6J9 526 aaKnown RBP6.86□□□□□ -1.31
VTI1A-201ENST00000393077 SYS1Q8N2H4 156 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 CYB561D1Q8N8Q1 229 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 DCAF4L2Q8NA75 395 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 CSNK2A3Q8NEV1 391 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 GPR32P1Q8NGA4 272 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 OR5AR1Q8NGP9 310 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 TMEM239Q8WW34 195 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 ZDHHC11Q9H8X9 412 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 SRA1Q9HD15 236 aaKnown RBP6.86□□□□□ -1.31
VTI1A-201ENST00000393077 MKKSQ9NPJ1 570 aaPredicted RBP6.86□□□□□ -1.31
VTI1A-201ENST00000393077 EHFQ9NZC4 300 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 PPP1R3CQ9UQK1 317 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 COL11A1P12107 1806 aaPredicted RBP6.86□□□□□ -1.31
VTI1A-201ENST00000393077 VSTM2BA6NLU5 285 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 BCAT2O15382 392 aaPredicted RBP6.86□□□□□ -1.31
VTI1A-201ENST00000393077 HPNP05981 417 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 CEACAM1P13688 526 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 FPR2P25090 351 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 ARRB1P49407 418 aaPredicted RBP6.86□□□□□ -1.31
VTI1A-201ENST00000393077 CNN1P51911 297 aaKnown RBP6.86□□□□□ -1.31
VTI1A-201ENST00000393077 RBX1P62877 108 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 BTNL8Q6UX41 500 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 OR4B1Q8NGF8 309 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 SLC2A12Q8TD20 617 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 CXorf40AQ8TE69 158 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 ORAOV1Q8WV07 137 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 MOB3AQ96BX8 217 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 PELI1Q96FA3 418 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 ANGPTL4Q9BY76 406 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 RAB18Q9NP72 206 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 IL23AQ9NPF7 189 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 SLC2A4RGQ9NR83 387 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 B3GAT1Q9P2W7 334 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 CLEC4EQ9ULY5 219 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 TMED7Q9Y3B3 224 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 WIPI2Q9Y4P8 454 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 TRIP12Q14669 1992 aaPredicted RBP6.86□□□□□ -1.31
VTI1A-201ENST00000393077 E5RGE8 158 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 HLA-HP01893 362 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 UMODP07911 640 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 CTSAP10619 480 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 CD99P14209 185 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 MMP9P14780 707 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 ARL3P36405 182 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 OPRD1P41143 372 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 PPICP45877 212 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 FAM3AP98173 230 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 TIAL1Q01085 375 aaKnown RBP eCLIP6.86□□□□□ -1.31
VTI1A-201ENST00000393077 DECR1Q16698 335 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 PLXDC2Q6UX71 529 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 SLC25A42Q86VD7 318 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 TMEM25Q86YD3 366 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 SULF2Q8IWU5 870 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 PLPP7Q8NBV4 271 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 TMEM255BQ8WV15 326 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 NEURL3Q96EH8 262 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms