RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 LIMS4P0CW20 117 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 TCP1P17987 556 aaKnown RBP5.13□□□□□ -1.59
TRAV35-201ENST00000390462 USF1P22415 310 aaPredicted RBP5.13□□□□□ -1.59
TRAV35-201ENST00000390462 SHC1P29353 583 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 GTF2H1P32780 548 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 KIR2DS2P43631 304 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 CBX5P45973 191 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 STC1P52823 247 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 TAS2R31P59538 309 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 ERVS71-1P61550 626 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 CD164Q04900 197 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 CDC20Q12834 499 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 MLLT11Q13015 90 aaPredicted RBP5.13□□□□□ -1.59
TRAV35-201ENST00000390462 C17orf58Q2M2W7 97 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 UBE2UQ5VVX9 321 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 PRSS41Q7RTY9 318 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 ZNF571Q7Z3V5 609 aaPredicted RBP5.13□□□□□ -1.59
TRAV35-201ENST00000390462 C9orf40Q8IXQ3 194 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 ATPAF2Q8N5M1 289 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 NUP37Q8NFH4 326 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 OR2AE1Q8NHA4 323 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 TMEM234Q8WY98 164 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 RNF145Q96MT1 663 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 MEIS3Q99687 375 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 RNF126Q9BV68 326 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 ZNF747Q9BV97 191 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 CLEC7AQ9BXN2 247 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 BARHL1Q9BZE3 327 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 NXF2Q9GZY0 626 aaKnown RBP5.13□□□□□ -1.59
TRAV35-201ENST00000390462 SPHK2Q9NRA0 654 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 CALYQ9NYX4 217 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 GUCA1BQ9UMX6 200 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 KLF12Q9Y4X4 402 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 OR51B2Q9Y5P1 312 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 MTCH2Q9Y6C9 303 aa5.13□□□□□ -1.59
TRAV35-201ENST00000390462 GREB1LQ9C091 1923 aaPredicted RBP5.13□□□□□ -1.59
TRAV35-201ENST00000390462 A0A0G2JLM5 398 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 NCBP2LA6PVI3 153 aaKnown RBP5.12□□□□□ -1.59
TRAV35-201ENST00000390462 FOXI3A8MTJ6 420 aaPredicted RBP5.12□□□□□ -1.59
TRAV35-201ENST00000390462 FAM220BPB1ANY3 271 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 F5H768 121 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 PGRMC1O00264 195 aaKnown RBP5.12□□□□□ -1.59
TRAV35-201ENST00000390462 ACOT8O14734 319 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 CRXO43186 299 aaPredicted RBP5.12□□□□□ -1.59
TRAV35-201ENST00000390462 ATP6V1G2O95670 118 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 CLDN1O95832 211 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 CD8AP01732 235 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 CAV2P51636 162 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 UBE2E1P51965 193 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 RAP1GDS1P52306 607 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 RIDAP52758 137 aaKnown RBP5.12□□□□□ -1.59
TRAV35-201ENST00000390462 AQP5P55064 265 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 NDUFV3P56181 108 aaKnown RBP5.12□□□□□ -1.59
TRAV35-201ENST00000390462 ZNF121P58317 390 aaPredicted RBP5.12□□□□□ -1.59
TRAV35-201ENST00000390462 ERVPABLB-1P60509 514 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 SRSF4Q08170 494 aaKnown RBP5.12□□□□□ -1.59
TRAV35-201ENST00000390462 CLINT1Q14677 625 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 ZNF146Q15072 292 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 PDK2Q15119 407 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 TMED2Q15363 201 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 TRAM1Q15629 374 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 SLC1A5Q15758 541 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 POU2AF1Q16633 256 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 MICAQ29983 383 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 AKIRIN2Q53H80 203 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 OGFRL1Q5TC84 451 aaPredicted RBP5.12□□□□□ -1.59
TRAV35-201ENST00000390462 LPCAT4Q643R3 524 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 SLC35E4Q6ICL7 350 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 MED27Q6P2C8 311 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 NPSR1Q6W5P4 371 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 PPP1R27Q86WC6 154 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 DAW1Q8N136 415 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 OR2A12Q8NGT7 310 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 SYNPRQ8TBG9 265 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 ACTL9Q8TC94 416 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 AGAP11Q8TF27 550 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 APH1BQ8WW43 257 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 TAF15Q92804 592 aaKnown RBP eCLIP5.12□□□□□ -1.59
TRAV35-201ENST00000390462 HGDQ93099 445 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 UBE2E2Q96LR5 201 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 CDX2Q99626 313 aaPredicted RBP5.12□□□□□ -1.59
TRAV35-201ENST00000390462 APOL4Q9BPW4 351 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 MRPS26Q9BYN8 205 aaKnown RBP5.12□□□□□ -1.59
TRAV35-201ENST00000390462 SELENOIQ9C0D9 397 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 DDX31Q9H8H2 851 aaKnown RBP5.12□□□□□ -1.59
TRAV35-201ENST00000390462 KCNJ16Q9NPI9 418 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 TMEM9BQ9NQ34 198 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 V9GY05 133 aa5.12□□□□□ -1.59
TRAV35-201ENST00000390462 PTPRFP10586 1907 aa5.11□□□□□ -1.59
TRAV35-201ENST00000390462 MYO9BQ13459 2157 aa5.11□□□□□ -1.59
TRAV35-201ENST00000390462 CCL15-CCL14A0A0B4J2E2 113 aa5.11□□□□□ -1.59
TRAV35-201ENST00000390462 A0A0G2JRQ6 117 aa5.11□□□□□ -1.59
TRAV35-201ENST00000390462 RBMY1BA6NDE4 496 aaKnown RBP5.11□□□□□ -1.59
TRAV35-201ENST00000390462 RBMY1EA6NEQ0 496 aaKnown RBP5.11□□□□□ -1.59
TRAV35-201ENST00000390462 GJE1A6NN92 205 aa5.11□□□□□ -1.59
TRAV35-201ENST00000390462 OR2AT4A6NND4 320 aa5.11□□□□□ -1.59
TRAV35-201ENST00000390462 ZNF726A6NNF4 738 aa5.11□□□□□ -1.59
TRAV35-201ENST00000390462 ZNF593O00488 134 aaPredicted RBP5.11□□□□□ -1.59
TRAV35-201ENST00000390462 PHF1O43189 567 aaPredicted RBP5.11□□□□□ -1.59
TRAV35-201ENST00000390462 TGOLN2O43493 480 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms