RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 RBBP9O75884 186 aa8.83□□□□□ -1
LTN1-203ENST00000389195 RLN1P04808 185 aa8.83□□□□□ -1
LTN1-203ENST00000389195 CDNFQ49AH0 187 aa8.83□□□□□ -1
LTN1-203ENST00000389195 SCGB2B2Q4G0G5 96 aa8.83□□□□□ -1
LTN1-203ENST00000389195 PLAC9Q5JTB6 97 aa8.83□□□□□ -1
LTN1-203ENST00000389195 ADGRE4PQ86SQ3 457 aa8.83□□□□□ -1
LTN1-203ENST00000389195 FAM219AQ8IW50 185 aa8.83□□□□□ -1
LTN1-203ENST00000389195 FAM109AQ8N4B1 249 aa8.83□□□□□ -1
LTN1-203ENST00000389195 OR6M1Q8NGM8 313 aa8.83□□□□□ -1
LTN1-203ENST00000389195 RAB40AQ8WXH6 277 aa8.83□□□□□ -1
LTN1-203ENST00000389195 PIGCQ92535 297 aa8.83□□□□□ -1
LTN1-203ENST00000389195 PNPLA2Q96AD5 504 aa8.83□□□□□ -1
LTN1-203ENST00000389195 SORCS2Q96PQ0 1159 aa8.83□□□□□ -1
LTN1-203ENST00000389195 HDHD3Q9BSH5 251 aaPredicted RBP8.83□□□□□ -1
LTN1-203ENST00000389195 C20orf85Q9H1P6 137 aa8.83□□□□□ -1
LTN1-203ENST00000389195 DPAGT1Q9H3H5 408 aa8.83□□□□□ -1
LTN1-203ENST00000389195 SLC17A5Q9NRA2 495 aa8.83□□□□□ -1
LTN1-203ENST00000389195 SIX6O95475 246 aa8.83□□□□□ -1
LTN1-203ENST00000389195 YES1P07947 543 aa8.83□□□□□ -1
LTN1-203ENST00000389195 H2AFB2P0C5Z0 115 aa8.83□□□□□ -1
LTN1-203ENST00000389195 CEACAM1P13688 526 aa8.83□□□□□ -1
LTN1-203ENST00000389195 CRYGSP22914 178 aa8.83□□□□□ -1
LTN1-203ENST00000389195 PRSS3P35030 304 aa8.83□□□□□ -1
LTN1-203ENST00000389195 NBL1P41271 181 aa8.83□□□□□ -1
LTN1-203ENST00000389195 RAB1AP62820 205 aa8.83□□□□□ -1
LTN1-203ENST00000389195 GRB2P62993 217 aaKnown RBP8.83□□□□□ -1
LTN1-203ENST00000389195 KIAA2026Q5HYC2 2103 aa8.83□□□□□ -1
LTN1-203ENST00000389195 CPT1CQ8TCG5 803 aa8.83□□□□□ -1
LTN1-203ENST00000389195 APH1AQ96BI3 265 aa8.83□□□□□ -1
LTN1-203ENST00000389195 C1orf147Q96MC9 270 aaPredicted RBP8.83□□□□□ -1
LTN1-203ENST00000389195 ZNF71Q9NQZ8 489 aaPredicted RBP8.83□□□□□ -1
LTN1-203ENST00000389195 PKDREJQ9NTG1 2253 aa8.83□□□□□ -1
LTN1-203ENST00000389195 MAP1AP78559 2803 aaPredicted RBP8.82□□□□□ -1
LTN1-203ENST00000389195 ANKRD20A5PA0PJZ0 165 aa8.82□□□□□ -1
LTN1-203ENST00000389195 SLC22A20A6NK97 555 aa8.82□□□□□ -1
LTN1-203ENST00000389195 CENPXA8MT69 81 aa8.82□□□□□ -1
LTN1-203ENST00000389195 MMP7P09237 267 aaPredicted RBP8.82□□□□□ -1
LTN1-203ENST00000389195 FSTP19883 344 aa8.82□□□□□ -1
LTN1-203ENST00000389195 GABRR1P24046 479 aa8.82□□□□□ -1
LTN1-203ENST00000389195 QRFPP83859 136 aa8.82□□□□□ -1
LTN1-203ENST00000389195 ZNF585AQ6P3V2 769 aa8.82□□□□□ -1
LTN1-203ENST00000389195 VWA1Q6PCB0 445 aa8.82□□□□□ -1
LTN1-203ENST00000389195 ZNF782Q6ZMW2 699 aaPredicted RBP8.82□□□□□ -1
LTN1-203ENST00000389195 NCCRP1Q6ZVX7 275 aaPredicted RBP8.82□□□□□ -1
LTN1-203ENST00000389195 TMED4Q7Z7H5 227 aa8.82□□□□□ -1
LTN1-203ENST00000389195 FJX1Q86VR8 437 aa8.82□□□□□ -1
LTN1-203ENST00000389195 ZNF584Q8IVC4 421 aa8.82□□□□□ -1
LTN1-203ENST00000389195 GRPEL2Q8TAA5 225 aa8.82□□□□□ -1
LTN1-203ENST00000389195 TNFAIP8L1Q8WVP5 186 aa8.82□□□□□ -1
LTN1-203ENST00000389195 ARHGAP5-AS1Q96IT6 56 aa8.82□□□□□ -1
LTN1-203ENST00000389195 HS3ST6Q96QI5 342 aa8.82□□□□□ -1
LTN1-203ENST00000389195 CACNA1DQ01668 2161 aa8.82□□□□□ -1
LTN1-203ENST00000389195 HMX3A6NHT5 357 aa8.82□□□□□ -1
LTN1-203ENST00000389195 HSPB2A8KAH6 182 aa8.82□□□□□ -1
LTN1-203ENST00000389195 ACOT7O00154 380 aa8.82□□□□□ -1
LTN1-203ENST00000389195 LDLRAD4O15165 306 aa8.82□□□□□ -1
LTN1-203ENST00000389195 DHRS3O75911 302 aa8.82□□□□□ -1
LTN1-203ENST00000389195 AGFG2O95081 481 aa8.82□□□□□ -1
LTN1-203ENST00000389195 IL18BPO95998 194 aa8.82□□□□□ -1
LTN1-203ENST00000389195 PTBP1P26599 531 aaKnown RBP eCLIP8.82□□□□□ -1
LTN1-203ENST00000389195 MTCP1P56278 107 aa8.82□□□□□ -1
LTN1-203ENST00000389195 TMEM50BP56557 158 aa8.82□□□□□ -1
LTN1-203ENST00000389195 ERVS71-1P61550 626 aa8.82□□□□□ -1
LTN1-203ENST00000389195 HSPB2Q16082 182 aa8.82□□□□□ -1
LTN1-203ENST00000389195 GSG1Q2KHT4 349 aa8.82□□□□□ -1
LTN1-203ENST00000389195 C2orf68Q2NKX9 166 aa8.82□□□□□ -1
LTN1-203ENST00000389195 ZFP69Q49AA0 526 aa8.82□□□□□ -1
LTN1-203ENST00000389195 SLC7A5P1Q8MH63 180 aa8.82□□□□□ -1
LTN1-203ENST00000389195 SPTSSAQ969W0 71 aa8.82□□□□□ -1
LTN1-203ENST00000389195 ING3Q9NXR8 418 aa8.82□□□□□ -1
LTN1-203ENST00000389195 SH3BGRL2Q9UJC5 107 aa8.82□□□□□ -1
LTN1-203ENST00000389195 TIMM10BQ9Y5J6 103 aa8.82□□□□□ -1
LTN1-203ENST00000389195 ETV7Q9Y603 341 aa8.82□□□□□ -1
LTN1-203ENST00000389195 PLCE1Q9P212 2302 aa8.82□□□□□ -1
LTN1-203ENST00000389195 ITPR1Q14643 2758 aa8.82□□□□□ -1
LTN1-203ENST00000389195 SHANK1Q9Y566 2161 aa8.82□□□□□ -1
LTN1-203ENST00000389195 H7C417 338 aa8.82□□□□□ -1
LTN1-203ENST00000389195 TMEM225BP0DP42 221 aa8.82□□□□□ -1
LTN1-203ENST00000389195 PI3P19957 117 aa8.82□□□□□ -1
LTN1-203ENST00000389195 OTX1P32242 354 aaPredicted RBP8.82□□□□□ -1
LTN1-203ENST00000389195 RRADP55042 308 aa8.82□□□□□ -1
LTN1-203ENST00000389195 HIST1H3AP68431 136 aa8.82□□□□□ -1
LTN1-203ENST00000389195 NKAPLQ5M9Q1 402 aa8.82□□□□□ -1
LTN1-203ENST00000389195 HIST2H3PS2Q5TEC6 136 aa8.82□□□□□ -1
LTN1-203ENST00000389195 HIST2H3AQ71DI3 136 aa8.82□□□□□ -1
LTN1-203ENST00000389195 DOK3Q7L591 496 aa8.82□□□□□ -1
LTN1-203ENST00000389195 SCMH1Q96GD3 660 aa8.82□□□□□ -1
LTN1-203ENST00000389195 ZC3HAV1LQ96H79 300 aaKnown RBP8.82□□□□□ -1
LTN1-203ENST00000389195 SCNM1Q9BWG6 230 aa8.82□□□□□ -1
LTN1-203ENST00000389195 METTL17Q9H7H0 456 aaPredicted RBP8.82□□□□□ -1
LTN1-203ENST00000389195 PRR13Q9NZ81 148 aa8.82□□□□□ -1
LTN1-203ENST00000389195 MTFP1Q9UDX5 166 aa8.82□□□□□ -1
LTN1-203ENST00000389195 GPR160Q9UJ42 338 aa8.82□□□□□ -1
LTN1-203ENST00000389195 F8VVB4 439 aa8.81□□□□□ -1
LTN1-203ENST00000389195 F8VWA3 439 aa8.81□□□□□ -1
LTN1-203ENST00000389195 SDCBPO00560 298 aaPredicted RBP8.81□□□□□ -1
LTN1-203ENST00000389195 GSTZ1O43708 216 aaPredicted RBP8.81□□□□□ -1
LTN1-203ENST00000389195 SSNA1O43805 119 aa8.81□□□□□ -1
LTN1-203ENST00000389195 PMP2P02689 132 aa8.81□□□□□ -1
LTN1-203ENST00000389195 PSMB1P20618 241 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms