RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 SPINK2P20155 84 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 FDXRP22570 491 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 C17orf99Q6UX52 265 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 OR52B4Q8NGK2 314 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 ANGPTL4Q9BY76 406 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 FOXJ3Q9UPW0 622 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 KIR2DS5A0A0G2JLQ3 304 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 A0A0G2JNG1 304 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 OOEPA6NGQ2 149 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 KLRC4-KLRK1H3BQV0 150 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 KIR2DS3K7RE56 304 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 GLCEO94923 617 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 RING1Q06587 406 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 KIR2DS5Q14953 304 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 ASCL4Q6XD76 172 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 WDR31Q8NA23 367 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 CPEB3Q8NE35 698 aaKnown RBP9.78□□□□□ -0.84
CLCN4-202ENST00000380833 NOX4Q9NPH5 578 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 HHLA2Q9UM44 414 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 SSUH2Q9Y2M2 353 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 KCNK7Q9Y2U2 307 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 HRO43593 1189 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 GABRA1P14867 456 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 PPIAP62937 165 aaKnown RBP9.78□□□□□ -0.84
CLCN4-202ENST00000380833 SPATA46Q5T0L3 261 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 FAM78BQ5VT40 261 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 ZNF322Q6U7Q0 402 aaPredicted RBP9.78□□□□□ -0.84
CLCN4-202ENST00000380833 CXorf67Q86X51 503 aaPredicted RBP9.78□□□□□ -0.84
CLCN4-202ENST00000380833 STACQ99469 402 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 MARVELD1Q9BSK0 173 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 TMEM212A6NML5 194 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 RBM11P57052 281 aaKnown RBP9.78□□□□□ -0.84
CLCN4-202ENST00000380833 COX19Q49B96 90 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 MANEALQ5VSG8 457 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 Q7L0L9 218 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 UMODL1-AS1Q8N2C9 162 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 DHRS4Q9BTZ2 278 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 C6orf106Q9H6K1 298 aaPredicted RBP9.78□□□□□ -0.84
CLCN4-202ENST00000380833 SIRPB1O00241 398 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 UQCRFS1P47985 274 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 KIR2DS3Q14952 304 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 TDHQ8IZJ6 230 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 OR4S1Q8NGB4 309 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 OR1P1Q8NH06 330 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 FSCN3Q9NQT6 498 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 NXT1Q9UKK6 140 aaKnown RBP9.78□□□□□ -0.84
CLCN4-202ENST00000380833 AMDHD2Q9Y303 409 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 BCL9LQ86UU0 1499 aa9.78□□□□□ -0.84
CLCN4-202ENST00000380833 CT45A6P0DMU7 189 aa9.77□□□□□ -0.84
CLCN4-202ENST00000380833 CT45A5P0DMU8 189 aa9.77□□□□□ -0.84
CLCN4-202ENST00000380833 CT45A7P0DMV0 189 aa9.77□□□□□ -0.84
CLCN4-202ENST00000380833 HIST1H1TP22492 207 aaPredicted RBP9.77□□□□□ -0.84
CLCN4-202ENST00000380833 PCBD1P61457 104 aa9.77□□□□□ -0.84
CLCN4-202ENST00000380833 SSX1Q16384 188 aa9.77□□□□□ -0.84
CLCN4-202ENST00000380833 CT45A1Q5HYN5 189 aa9.77□□□□□ -0.84
CLCN4-202ENST00000380833 KDM4DQ6B0I6 523 aa9.77□□□□□ -0.84
CLCN4-202ENST00000380833 CT45A3Q8NHU0 189 aa9.77□□□□□ -0.84
CLCN4-202ENST00000380833 CDCA4Q9BXL8 241 aa9.77□□□□□ -0.84
CLCN4-202ENST00000380833 PIPOXQ9P0Z9 390 aa9.77□□□□□ -0.84
CLCN4-202ENST00000380833 NAT8Q9UHE5 227 aa9.77□□□□□ -0.84
CLCN4-202ENST00000380833 LINC01565O15544 149 aa9.77□□□□□ -0.84
CLCN4-202ENST00000380833 NUDT3O95989 172 aa9.77□□□□□ -0.84
CLCN4-202ENST00000380833 SOD3P08294 240 aa9.77□□□□□ -0.84
CLCN4-202ENST00000380833 C1SP09871 688 aa9.77□□□□□ -0.84
CLCN4-202ENST00000380833 NPBWR2P48146 333 aa9.77□□□□□ -0.84
CLCN4-202ENST00000380833 SNRPGP62308 76 aaKnown RBP9.77□□□□□ -0.84
CLCN4-202ENST00000380833 IFITM2Q01629 132 aa9.77□□□□□ -0.84
CLCN4-202ENST00000380833 MED25Q71SY5 747 aa9.77□□□□□ -0.84
CLCN4-202ENST00000380833 PIANPQ8IYJ0 282 aa9.77□□□□□ -0.84
CLCN4-202ENST00000380833 AMBRA1Q9C0C7 1298 aa9.77□□□□□ -0.84
CLCN4-202ENST00000380833 BTNL2Q9UIR0 455 aa9.77□□□□□ -0.84
CLCN4-202ENST00000380833 LMX1BO60663 402 aa9.77□□□□□ -0.85
CLCN4-202ENST00000380833 C1orf105O95561 183 aa9.77□□□□□ -0.85
CLCN4-202ENST00000380833 HOXD4P09016 255 aaPredicted RBP9.77□□□□□ -0.85
CLCN4-202ENST00000380833 ELAVL4P26378 380 aaKnown RBP9.77□□□□□ -0.85
CLCN4-202ENST00000380833 PPP2CBP62714 309 aa9.77□□□□□ -0.85
CLCN4-202ENST00000380833 GABREP78334 506 aa9.77□□□□□ -0.85
CLCN4-202ENST00000380833 PMCHL1Q16048 86 aa9.77□□□□□ -0.85
CLCN4-202ENST00000380833 DGAT2L6Q6ZPD8 337 aa9.77□□□□□ -0.85
CLCN4-202ENST00000380833 SCD5Q86SK9 330 aa9.77□□□□□ -0.85
CLCN4-202ENST00000380833 TUSC5Q8IXB3 177 aa9.77□□□□□ -0.85
CLCN4-202ENST00000380833 ADAT3Q96EY9 351 aaPredicted RBP9.77□□□□□ -0.85
CLCN4-202ENST00000380833 B3GALT5Q9Y2C3 310 aa9.77□□□□□ -0.85
CLCN4-202ENST00000380833 GAMTQ14353 236 aa9.77□□□□□ -0.85
CLCN4-202ENST00000380833 Q499Y3 187 aa9.77□□□□□ -0.85
CLCN4-202ENST00000380833 SOWAHCQ53LP3 525 aaPredicted RBP9.77□□□□□ -0.85
CLCN4-202ENST00000380833 ADGRE4PQ86SQ3 457 aa9.77□□□□□ -0.85
CLCN4-202ENST00000380833 PTRH1Q86Y79 214 aaKnown RBP9.77□□□□□ -0.85
CLCN4-202ENST00000380833 OR2A1Q8NGT9 310 aa9.77□□□□□ -0.85
CLCN4-202ENST00000380833 PLSCR4Q9NRQ2 329 aa9.77□□□□□ -0.85
CLCN4-202ENST00000380833 CLEC2DQ9UHP7 191 aa9.77□□□□□ -0.85
CLCN4-202ENST00000380833 SLIT3O75094 1523 aa9.77□□□□□ -0.85
CLCN4-202ENST00000380833 WNT11O96014 354 aa9.77□□□□□ -0.85
CLCN4-202ENST00000380833 GUSBP08236 651 aa9.77□□□□□ -0.85
CLCN4-202ENST00000380833 CD68P34810 354 aaPredicted RBP9.77□□□□□ -0.85
CLCN4-202ENST00000380833 WBP2NLQ6ICG8 309 aa9.77□□□□□ -0.85
CLCN4-202ENST00000380833 PRSS35Q8N3Z0 413 aa9.77□□□□□ -0.85
CLCN4-202ENST00000380833 DEFB124Q8NES8 71 aa9.77□□□□□ -0.85
CLCN4-202ENST00000380833 OR51H1Q8NH63 302 aa9.77□□□□□ -0.85
CLCN4-202ENST00000380833 BOD1Q96IK1 185 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms