RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 CAPSLQ8WWF8 208 aa16.79■□□□□ 0.28
GMDS-201ENST00000380805 SLC7A10Q9NS82 523 aa16.79■□□□□ 0.28
GMDS-201ENST00000380805 MYEF2Q9P2K5 600 aaKnown RBP16.79■□□□□ 0.28
GMDS-201ENST00000380805 TMEM235A6NFC5 223 aa16.79■□□□□ 0.28
GMDS-201ENST00000380805 ITGB2P05107 769 aa16.79■□□□□ 0.28
GMDS-201ENST00000380805 KISS1Q15726 138 aa16.79■□□□□ 0.28
GMDS-201ENST00000380805 UBE2V2Q15819 145 aa16.79■□□□□ 0.28
GMDS-201ENST00000380805 SFRP5Q5T4F7 317 aa16.79■□□□□ 0.28
GMDS-201ENST00000380805 IGFL2Q6UWQ7 119 aa16.79■□□□□ 0.28
GMDS-201ENST00000380805 ZNF782Q6ZMW2 699 aaPredicted RBP16.79■□□□□ 0.28
GMDS-201ENST00000380805 ZNF100Q8IYN0 542 aa16.79■□□□□ 0.28
GMDS-201ENST00000380805 FNDC9Q8TBE3 224 aa16.79■□□□□ 0.28
GMDS-201ENST00000380805 SPACA5Q96QH8 159 aa16.79■□□□□ 0.28
GMDS-201ENST00000380805 ITGB1BP2Q9UKP3 347 aa16.79■□□□□ 0.28
GMDS-201ENST00000380805 CDC14BO60729 498 aa16.78■□□□□ 0.28
GMDS-201ENST00000380805 ATP6V1G1O75348 118 aa16.78■□□□□ 0.28
GMDS-201ENST00000380805 FAHP16930 419 aa16.78■□□□□ 0.28
GMDS-201ENST00000380805 CXCL3P19876 107 aa16.78■□□□□ 0.28
GMDS-201ENST00000380805 MPZP25189 248 aa16.78■□□□□ 0.28
GMDS-201ENST00000380805 HTR5AP47898 357 aa16.78■□□□□ 0.28
GMDS-201ENST00000380805 TNFSF10P50591 281 aa16.78■□□□□ 0.28
GMDS-201ENST00000380805 ARG2P78540 354 aa16.78■□□□□ 0.28
GMDS-201ENST00000380805 ZNF626Q68DY1 528 aa16.78■□□□□ 0.28
GMDS-201ENST00000380805 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.78■□□□□ 0.28
GMDS-201ENST00000380805 TUSC5Q8IXB3 177 aa16.78■□□□□ 0.28
GMDS-201ENST00000380805 ZNF101Q8IZC7 436 aa16.78■□□□□ 0.28
GMDS-201ENST00000380805 PNLDC1Q8NA58 520 aaKnown RBP16.78■□□□□ 0.28
GMDS-201ENST00000380805 BEST4Q8NFU0 473 aa16.78■□□□□ 0.28
GMDS-201ENST00000380805 SEMA6DQ8NFY4 1073 aa16.78■□□□□ 0.28
GMDS-201ENST00000380805 AKR7LQ8NHP1 331 aa16.78■□□□□ 0.28
GMDS-201ENST00000380805 FGFBP3Q8TAT2 258 aa16.78■□□□□ 0.28
GMDS-201ENST00000380805 MS4A3Q96HJ5 214 aa16.78■□□□□ 0.28
GMDS-201ENST00000380805 HYLS1Q96M11 299 aa16.78■□□□□ 0.28
GMDS-201ENST00000380805 GAL3ST1Q99999 423 aa16.78■□□□□ 0.28
GMDS-201ENST00000380805 ANAPC10Q9UM13 185 aa16.78■□□□□ 0.28
GMDS-201ENST00000380805 PIGLQ9Y2B2 252 aa16.78■□□□□ 0.28
GMDS-201ENST00000380805 MEIS3P1A6NDR6 274 aa16.77■□□□□ 0.28
GMDS-201ENST00000380805 A6NL46 340 aa16.77■□□□□ 0.28
GMDS-201ENST00000380805 CYB5AP00167 134 aa16.77■□□□□ 0.28
GMDS-201ENST00000380805 GSTP1P09211 210 aaKnown RBP16.77■□□□□ 0.28
GMDS-201ENST00000380805 RAD52P43351 418 aa16.77■□□□□ 0.28
GMDS-201ENST00000380805 ZP1P60852 638 aa16.77■□□□□ 0.28
GMDS-201ENST00000380805 SLC36A1Q7Z2H8 476 aa16.77■□□□□ 0.28
GMDS-201ENST00000380805 FAM89BQ8N5H3 189 aa16.77■□□□□ 0.28
GMDS-201ENST00000380805 TMEM104Q8NE00 496 aa16.77■□□□□ 0.28
GMDS-201ENST00000380805 OR51S1Q8NGJ8 323 aa16.77■□□□□ 0.28
GMDS-201ENST00000380805 SPSB1Q96BD6 273 aa16.77■□□□□ 0.28
GMDS-201ENST00000380805 REEP6Q96HR9 211 aa16.77■□□□□ 0.28
GMDS-201ENST00000380805 GP6Q9HCN6 339 aa16.77■□□□□ 0.28
GMDS-201ENST00000380805 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.77■□□□□ 0.28
GMDS-201ENST00000380805 SLC2A8Q9NY64 477 aa16.77■□□□□ 0.28
GMDS-201ENST00000380805 ELF5Q9UKW6 265 aaPredicted RBP16.77■□□□□ 0.28
GMDS-201ENST00000380805 LIPGQ9Y5X9 500 aa16.77■□□□□ 0.28
GMDS-201ENST00000380805 ZNF407Q9C0G0 2248 aa16.77■□□□□ 0.27
GMDS-201ENST00000380805 ARHGAP21Q5T5U3 1957 aa16.77■□□□□ 0.27
GMDS-201ENST00000380805 FRYQ5TBA9 3013 aa16.77■□□□□ 0.27
GMDS-201ENST00000380805 A0A0A6YYD4 124 aa16.76■□□□□ 0.27
GMDS-201ENST00000380805 ZNF587BE7ETH6 402 aa16.76■□□□□ 0.27
GMDS-201ENST00000380805 PYCARD-AS1I3L0S3 204 aa16.76■□□□□ 0.27
GMDS-201ENST00000380805 RAB3DO95716 219 aa16.76■□□□□ 0.27
GMDS-201ENST00000380805 ZNF735P0CB33 412 aa16.76■□□□□ 0.27
GMDS-201ENST00000380805 PTGFRP43088 359 aa16.76■□□□□ 0.27
GMDS-201ENST00000380805 CDNFQ49AH0 187 aa16.76■□□□□ 0.27
GMDS-201ENST00000380805 TMEM42Q69YG0 159 aa16.76■□□□□ 0.27
GMDS-201ENST00000380805 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.76■□□□□ 0.27
GMDS-201ENST00000380805 VASH2Q86V25 355 aa16.76■□□□□ 0.27
GMDS-201ENST00000380805 FJX1Q86VR8 437 aa16.76■□□□□ 0.27
GMDS-201ENST00000380805 SPICQ8N5J4 248 aa16.76■□□□□ 0.27
GMDS-201ENST00000380805 GINS4Q9BRT9 223 aa16.76■□□□□ 0.27
GMDS-201ENST00000380805 TMEM59Q9BXS4 323 aa16.76■□□□□ 0.27
GMDS-201ENST00000380805 PRDM14Q9GZV8 571 aa16.76■□□□□ 0.27
GMDS-201ENST00000380805 ALX4Q9H161 411 aaPredicted RBP16.76■□□□□ 0.27
GMDS-201ENST00000380805 ZMAT3Q9HA38 289 aaKnown RBP16.76■□□□□ 0.27
GMDS-201ENST00000380805 GPN1Q9HCN4 374 aaPredicted RBP16.76■□□□□ 0.27
GMDS-201ENST00000380805 FOXI3A8MTJ6 420 aaPredicted RBP16.76■□□□□ 0.27
GMDS-201ENST00000380805 NKX2-8O15522 239 aa16.76■□□□□ 0.27
GMDS-201ENST00000380805 FABP7O15540 132 aa16.76■□□□□ 0.27
GMDS-201ENST00000380805 PATE4P0C8F1 98 aa16.76■□□□□ 0.27
GMDS-201ENST00000380805 COX5BP10606 129 aa16.76■□□□□ 0.27
GMDS-201ENST00000380805 ACKR3P25106 362 aa16.76■□□□□ 0.27
GMDS-201ENST00000380805 RIPPLY1Q0D2K3 151 aa16.76■□□□□ 0.27
GMDS-201ENST00000380805 MEF2DQ14814 521 aa16.76■□□□□ 0.27
GMDS-201ENST00000380805 ZMYND11Q15326 602 aa16.76■□□□□ 0.27
GMDS-201ENST00000380805 COLCA1Q6ZS62 124 aa16.76■□□□□ 0.27
GMDS-201ENST00000380805 ZNF584Q8IVC4 421 aa16.76■□□□□ 0.27
GMDS-201ENST00000380805 SPSB4Q96A44 273 aa16.76■□□□□ 0.27
GMDS-201ENST00000380805 CMBLQ96DG6 245 aa16.76■□□□□ 0.27
GMDS-201ENST00000380805 WDYHV1Q96HA8 205 aa16.76■□□□□ 0.27
GMDS-201ENST00000380805 GPER1Q99527 375 aa16.76■□□□□ 0.27
GMDS-201ENST00000380805 SLC25A21Q9BQT8 299 aaPredicted RBP16.76■□□□□ 0.27
GMDS-201ENST00000380805 CST11Q9H112 138 aa16.76■□□□□ 0.27
GMDS-201ENST00000380805 MYOZ1Q9NP98 299 aaPredicted RBP16.76■□□□□ 0.27
GMDS-201ENST00000380805 CACNA1AO00555 2505 aa16.75■□□□□ 0.27
GMDS-201ENST00000380805 DNAJC13O75165 2243 aa16.75■□□□□ 0.27
GMDS-201ENST00000380805 ZNF736B4DX44 427 aaPredicted RBP16.75■□□□□ 0.27
GMDS-201ENST00000380805 SSNA1O43805 119 aa16.75■□□□□ 0.27
GMDS-201ENST00000380805 CREBL2O60519 120 aaPredicted RBP16.75■□□□□ 0.27
GMDS-201ENST00000380805 ANXA7P20073 488 aaKnown RBP16.75■□□□□ 0.27
GMDS-201ENST00000380805 TBPP20226 339 aa16.75■□□□□ 0.27
GMDS-201ENST00000380805 RPS27AP62979 156 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms