RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 DMKNQ6E0U4 476 aaPredicted RBP8.36□□□□□ -1.07
PTPRA-204ENST00000380393 GLB1LQ6UWU2 654 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 MED25Q71SY5 747 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 OR2M7Q8NG81 312 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 GPX8Q8TED1 209 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 FAM3CQ92520 227 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 RAB8BQ92930 207 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 IL22RA2Q969J5 263 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 TMEM186Q96B77 213 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 AQP10Q96PS8 301 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 TRIB3Q96RU7 358 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 MAGT1Q9H0U3 335 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 NOX4Q9NPH5 578 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 CNIH4Q9P003 139 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 RNF115Q9Y4L5 304 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 V9GY05 133 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 C9orf172C9J069 976 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 FGF17O60258 216 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 MTX2O75431 263 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 SRMP19623 302 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 TNFSF4P23510 183 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 ZBTB25P24278 435 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 LGALS7P47929 136 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 BIDP55957 195 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 HBA1P69905 142 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 CYCSP99999 105 aaKnown RBP8.36□□□□□ -1.07
PTPRA-204ENST00000380393 BHLHA15Q7RTS1 189 aaPredicted RBP8.36□□□□□ -1.07
PTPRA-204ENST00000380393 ERASQ7Z444 233 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 FBXO22Q8NEZ5 403 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 OR4D11Q8NGI4 311 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 OR51A7Q8NH64 312 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 ZNF563Q8TA94 476 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 ZCCHC14Q8WYQ9 949 aaKnown RBP8.36□□□□□ -1.07
PTPRA-204ENST00000380393 ACY3Q96HD9 319 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 NICN1Q9BSH3 213 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 CST11Q9H112 138 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 ZBP1Q9H171 429 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 MED20Q9H944 212 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 CXXC1Q9P0U4 656 aaPredicted RBP8.36□□□□□ -1.07
PTPRA-204ENST00000380393 CLN8Q9UBY8 286 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 INSL6Q9Y581 213 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 TRIOO75962 3097 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 COL6A3P12111 3177 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 TRANK1O15050 2925 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 TRAV18A0A075B6X5 111 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 CLDN34H7C241 214 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 CORTO00230 105 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 TAAR5O14804 337 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 RHOCP08134 193 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 EDNRAP25101 427 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 SLC25A1P53007 311 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 SLC35A1P78382 337 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 REEP3Q6NUK4 255 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 ZNF880Q6PDB4 577 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 PRSS54Q6PEW0 395 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 MRGPREQ86SM8 312 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 OR2T27Q8NH04 317 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 TMEM37Q8WXS4 190 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 CCDC74AQ96AQ1 378 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 WFDC6Q9BQY6 131 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 ANKRD10Q9NXR5 420 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 PRRC2BQ5JSZ5 2229 aaKnown RBP8.35□□□□□ -1.07
PTPRA-204ENST00000380393 TRAV34A0A0B4J273 112 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 CLDN7O95471 211 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 KNG1P01042 644 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 ALPPL2P10696 532 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 PRSS3P35030 304 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 HINT1P49773 126 aaPredicted RBP8.35□□□□□ -1.07
PTPRA-204ENST00000380393 UCP2P55851 309 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 LASP1Q14847 261 aaKnown RBP8.35□□□□□ -1.07
PTPRA-204ENST00000380393 ZXDCQ2QGD7 858 aaPredicted RBP8.35□□□□□ -1.07
PTPRA-204ENST00000380393 PRAMEF5Q5TYX0 476 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 PRAMEF6Q5VXH4 476 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 OLIG3Q7RTU3 272 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 CLEC1AQ8NC01 280 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 APOBEC4Q8WW27 367 aaKnown RBP8.35□□□□□ -1.07
PTPRA-204ENST00000380393 GFI1Q99684 422 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 MRPL13Q9BYD1 178 aaKnown RBP8.35□□□□□ -1.07
PTPRA-204ENST00000380393 SMPXQ9UHP9 88 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 A0A1W2PNV4 684 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 TSPAN11A1L157 253 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 C1QL1O75973 258 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 EFEMP2O95967 443 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 CD33P20138 364 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 HNRNPA3P51991 378 aaKnown RBP8.35□□□□□ -1.07
PTPRA-204ENST00000380393 RAB38P57729 211 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 TAF10Q12962 218 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 FBXW12Q6X9E4 464 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 DNASE2BQ8WZ79 361 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 BADQ92934 168 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 GPR146Q96CH1 333 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 SGK2Q9HBY8 427 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 LYRM2Q9NU23 88 aaPredicted RBP8.35□□□□□ -1.07
PTPRA-204ENST00000380393 CDV3Q9UKY7 258 aaKnown RBP8.35□□□□□ -1.07
PTPRA-204ENST00000380393 SIGLEC7Q9Y286 467 aa8.35□□□□□ -1.07
PTPRA-204ENST00000380393 A0A1B0GU03 582 aa8.34□□□□□ -1.07
PTPRA-204ENST00000380393 E5RGE8 158 aa8.34□□□□□ -1.07
PTPRA-204ENST00000380393 J3QRE1 110 aa8.34□□□□□ -1.07
PTPRA-204ENST00000380393 M0R3H8 397 aa8.34□□□□□ -1.07
PTPRA-204ENST00000380393 HSD17B6O14756 317 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms