RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 RASD2Q96D21 266 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 CEACAM3P40198 252 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 DSCR4P56555 118 aaPredicted RBP10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 TMEM255BQ8WV15 326 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 HSPB8Q9UJY1 196 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 COL3A1P02461 1466 aaPredicted RBP10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 CDRT15L2A8MXV6 281 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 ZBTB25P24278 435 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 ATP6V1FQ16864 119 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 APOBEC3DQ96AK3 386 aaPredicted RBP10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 SEC11CQ9BY50 192 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 SCG5P05408 212 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 CALCBP10092 127 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 MTNR1BP49286 362 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 CHST6Q9GZX3 395 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 COL16A1Q07092 1604 aaPredicted RBP10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 GPR31O00270 319 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 LSMEM1Q8N8F7 131 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 DIRC2Q96SL1 478 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 TGIF2Q9GZN2 237 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 SLC7A10Q9NS82 523 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 USP54Q70EL1 1684 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 SLC25A4P12235 298 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 HCCSP53701 268 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 TCEAL1Q15170 157 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 NCR3LG1Q68D85 454 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 TRAT1Q6PIZ9 186 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 CBLL1Q75N03 491 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 DEFB108BQ8NET1 73 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 FBXO27Q8NI29 283 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 ZNF320A2RRD8 509 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 FAM181BA6NEQ2 426 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 ICMTO60725 284 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 UBTD1Q9HAC8 227 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 COA3Q9Y2R0 106 aaPredicted RBP10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 SERPINE3A8MV23 424 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 B4GALT1P15291 398 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 ZNF26P17031 533 aaPredicted RBP10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 MDH2P40926 338 aaKnown RBP10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 KLF3P57682 345 aaPredicted RBP10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 TMUB2Q71RG4 321 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 GDF7Q7Z4P5 450 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 RNF2Q99496 336 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 PLA2G12AQ9BZM1 189 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 SELENOFO60613 162 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 SLC25A5P05141 298 aaKnown RBP10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 GUSBP08236 651 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 LIMS3P0CW19 117 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 LIMS4P0CW20 117 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 FOXJ3Q9UPW0 622 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 PCBP4P57723 403 aaKnown RBP10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 SLC10A2Q12908 348 aaPredicted RBP10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 EIF3IQ13347 325 aaKnown RBP10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 OR52N1Q8NH53 320 aa10.19□□□□□ -0.78
PTCHD1-201ENST00000379361 HELZP42694 1942 aaKnown RBP10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 UBE2MP61081 183 aaKnown RBP10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 SIAH3Q8IW03 269 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 VAMP8Q9BV40 100 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 PLEKHA2Q9HB19 425 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 KRBA1A5PL33 1030 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 ARNTLO00327 626 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 ZNF195O14628 629 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 ARNTP27540 789 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 SDHAP31040 664 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 ZNF766Q5HY98 468 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 TOR2AQ5JU69 321 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 OR2I1PQ8NGU4 316 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 ACY3Q96HD9 319 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 CTNSO60931 367 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 SS18L1O75177 396 aaPredicted RBP10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 GTDC1Q4AE62 458 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 COL2A1P02458 1487 aaPredicted RBP10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 SMAD6O43541 496 aaKnown RBP10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 C11orf91Q3C1V1 193 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 CD276Q5ZPR3 534 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 SLC45A2Q9UMX9 530 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 SNX11Q9Y5W9 270 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 BMPR1BO00238 502 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 RELBQ01201 579 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 LRRC37A3O60309 1634 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 LAMB2P55268 1798 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 H0YIV9 168 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 RHBDL1O75783 438 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 TCTN1Q2MV58 587 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 S1PR5Q9H228 398 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 NME2P1O60361 137 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 CD3EP07766 207 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 KIAA0141Q14154 515 aaPredicted RBP10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 HLXQ14774 488 aaPredicted RBP10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 KCNMB1Q16558 191 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 NHLRC1Q6VVB1 395 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 SLAMF6Q96DU3 332 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 WASHC3Q9Y3C0 194 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 HRH3Q9Y5N1 445 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 R4GMQ9 66 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 TRDV1A0A1B0GX56 115 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 CEBPEQ15744 281 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 CD226Q15762 336 aa10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 RNASEKQ6P5S7 137 aaKnown RBP10.18□□□□□ -0.78
PTCHD1-201ENST00000379361 PTOV1Q86YD1 416 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms