RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 DMBX1Q8NFW5 382 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 RNF150Q9ULK6 438 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 ZFP92A6NM28 416 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 B4GALT1P15291 398 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 PWWP2BQ6NUJ5 590 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 OR2AK2Q8NG84 335 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 OR4C16Q8NGL9 310 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 ABHD1Q96SE0 405 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 C20orf24Q9BUV8 137 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 DECR2Q9NUI1 292 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 SCN4AP35499 1836 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 NRASP01111 189 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 WNT1P04628 370 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 NKX2-1P43699 371 aaPredicted RBP13.49□□□□□ -0.25
NPHP4-201ENST00000378156 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.49□□□□□ -0.25
NPHP4-201ENST00000378156 TEX261Q6UWH6 196 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 MFRPQ9BY79 579 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 FN3KRPQ9HA64 309 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 U3KQ87 197 aa13.49□□□□□ -0.25
NPHP4-201ENST00000378156 AKR1C1Q04828 323 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 WIPI1Q5MNZ9 446 aaPredicted RBP13.48□□□□□ -0.25
NPHP4-201ENST00000378156 BATF2Q8N1L9 274 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 ZNF768Q9H5H4 540 aaKnown RBP13.48□□□□□ -0.25
NPHP4-201ENST00000378156 PROCRQ9UNN8 238 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 PRELID3BQ9Y3B1 194 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 A0A1B0GTH9 108 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 EFSO43281 561 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 XRCC2O43543 280 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 GPANK1O95872 356 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 CRYAAP02489 173 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 MGST1P10620 155 aaKnown RBP13.48□□□□□ -0.25
NPHP4-201ENST00000378156 GALP22466 123 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 RPS23P62266 143 aaKnown RBP13.48□□□□□ -0.25
NPHP4-201ENST00000378156 SSBP1Q04837 148 aaKnown RBP13.48□□□□□ -0.25
NPHP4-201ENST00000378156 TOMM34Q15785 309 aaPredicted RBP13.48□□□□□ -0.25
NPHP4-201ENST00000378156 UQCC3Q6UW78 93 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 ALKBH3Q96Q83 286 aaPredicted RBP13.48□□□□□ -0.25
NPHP4-201ENST00000378156 SMOC1Q9H4F8 434 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 CYB5R1Q9UHQ9 305 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 LINC01387J3KSC0 135 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 SPINT2O43291 252 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 PDGFBP01127 241 aaPredicted RBP13.48□□□□□ -0.25
NPHP4-201ENST00000378156 EDDM3AQ14507 147 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 OR8G1Q15617 311 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 CEACAM16Q2WEN9 425 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 DMRTC1Q5HYR2 192 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 LAIR2Q6ISS4 152 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 ST8SIA2Q92186 375 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 FAM173AQ9BQD7 235 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 PLEKHF2Q9H8W4 249 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 OSGIN2Q9Y236 505 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 SLC22A20A6NK97 555 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 SELEP16581 610 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 ZNF92Q03936 586 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 ENDOGQ14249 297 aaKnown RBP13.48□□□□□ -0.25
NPHP4-201ENST00000378156 EXD3Q8N9H8 876 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 OR11G2Q8NGC1 345 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 OTOSQ8NHW6 89 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 ST6GAL2Q96JF0 529 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 POLDIP2Q9Y2S7 368 aa13.48□□□□□ -0.25
NPHP4-201ENST00000378156 LRRC30A6NM36 301 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 ZNF732B4DXR9 585 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 FABP6P51161 128 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 OR1C1Q15619 314 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 ZNF141Q15928 474 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 PHLDA2Q53GA4 152 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 ACER2Q5QJU3 275 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 CBLN3Q6UW01 205 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 C16orf47Q6ZP98 133 aaPredicted RBP13.47□□□□□ -0.25
NPHP4-201ENST00000378156 Q6ZRG5 221 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 OR4A16Q8NH70 328 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 OR8B4Q96RC9 309 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 PLK3Q9H4B4 646 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 CKAP5Q14008 2032 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 TUSC2O75896 110 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 PRSS53Q2L4Q9 553 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 PLXDC2Q6UX71 529 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 C12orf10Q9HB07 376 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 TNFSF14O43557 240 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 CDKN2AP42771 156 aaKnown RBP13.47□□□□□ -0.25
NPHP4-201ENST00000378156 SLC25A1P53007 311 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 PLA2G3Q9NZ20 509 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 SLC23A1Q9UHI7 598 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 SCN3AQ9NY46 2000 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 J3QR89 54 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 CTXN2P0C2S0 81 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 CD37P11049 281 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 ZP3P21754 424 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 ZNF121P58317 390 aaPredicted RBP13.47□□□□□ -0.25
NPHP4-201ENST00000378156 ELFN2Q5R3F8 820 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 DBX2Q6ZNG2 339 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 PRSS42Q7Z5A4 293 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 NOXO1Q8NFA2 376 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 TMEM18Q96B42 140 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 TRMT61AQ96FX7 289 aaKnown RBP13.47□□□□□ -0.25
NPHP4-201ENST00000378156 EGLN1Q9GZT9 426 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 ZNF331Q9NQX6 463 aaPredicted RBP13.47□□□□□ -0.25
NPHP4-201ENST00000378156 AK3Q9UIJ7 227 aa13.47□□□□□ -0.25
NPHP4-201ENST00000378156 PYCARD-AS1I3L0S3 204 aa13.46□□□□□ -0.25
NPHP4-201ENST00000378156 HS3ST1O14792 307 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms