RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 LYNX1P0DP58 116 aa11.21□□□□□ -0.61
CKAP2-202ENST00000378034 ACKR3P25106 362 aa11.21□□□□□ -0.61
CKAP2-202ENST00000378034 GBX2P52951 348 aaPredicted RBP11.21□□□□□ -0.61
CKAP2-202ENST00000378034 WDR38Q5JTN6 314 aa11.21□□□□□ -0.61
CKAP2-202ENST00000378034 PRSS35Q8N3Z0 413 aa11.21□□□□□ -0.61
CKAP2-202ENST00000378034 KLHL36Q8N4N3 616 aa11.21□□□□□ -0.61
CKAP2-202ENST00000378034 C18orf12Q96KH6 178 aa11.21□□□□□ -0.61
CKAP2-202ENST00000378034 COX4I2Q96KJ9 171 aa11.21□□□□□ -0.61
CKAP2-202ENST00000378034 Q9H521 79 aa11.21□□□□□ -0.61
CKAP2-202ENST00000378034 ZNF275Q9NSD4 429 aaPredicted RBP11.21□□□□□ -0.61
CKAP2-202ENST00000378034 FKBP14Q9NWM8 211 aa11.21□□□□□ -0.61
CKAP2-202ENST00000378034 C14orf119Q9NWQ9 140 aa11.21□□□□□ -0.61
CKAP2-202ENST00000378034 V9GYS6 101 aa11.21□□□□□ -0.61
CKAP2-202ENST00000378034 ZNF816-ZNF321PA0A0X1KG74 233 aa11.21□□□□□ -0.62
CKAP2-202ENST00000378034 A0A1B0GTI1 187 aa11.21□□□□□ -0.62
CKAP2-202ENST00000378034 A0A1B0GVI7 797 aa11.21□□□□□ -0.62
CKAP2-202ENST00000378034 H7C1Q1 480 aa11.21□□□□□ -0.62
CKAP2-202ENST00000378034 CDC14BO60729 498 aa11.21□□□□□ -0.62
CKAP2-202ENST00000378034 PTBP3O95758 552 aaKnown RBP11.21□□□□□ -0.62
CKAP2-202ENST00000378034 ISG15P05161 165 aa11.21□□□□□ -0.62
CKAP2-202ENST00000378034 CCDC159P0C7I6 412 aa11.21□□□□□ -0.62
CKAP2-202ENST00000378034 ZNF12P17014 697 aa11.21□□□□□ -0.62
CKAP2-202ENST00000378034 PSMB10P40306 273 aa11.21□□□□□ -0.62
CKAP2-202ENST00000378034 GPR6P46095 362 aaPredicted RBP11.21□□□□□ -0.62
CKAP2-202ENST00000378034 TGM4P49221 684 aa11.21□□□□□ -0.62
CKAP2-202ENST00000378034 ETV1P50549 477 aa11.21□□□□□ -0.62
CKAP2-202ENST00000378034 LOXL1Q08397 574 aaPredicted RBP11.21□□□□□ -0.62
CKAP2-202ENST00000378034 TMEM244Q5VVB8 128 aa11.21□□□□□ -0.62
CKAP2-202ENST00000378034 STX19Q8N4C7 294 aa11.21□□□□□ -0.62
CKAP2-202ENST00000378034 OR8S1Q8NH09 359 aa11.21□□□□□ -0.62
CKAP2-202ENST00000378034 FAM71F1Q96KD3 344 aaPredicted RBP11.21□□□□□ -0.62
CKAP2-202ENST00000378034 SOX7Q9BT81 388 aa11.21□□□□□ -0.62
CKAP2-202ENST00000378034 PAPOLGQ9BWT3 736 aaKnown RBP11.21□□□□□ -0.62
CKAP2-202ENST00000378034 ISG20L2Q9H9L3 353 aaKnown RBP11.21□□□□□ -0.62
CKAP2-202ENST00000378034 PPP1R3CQ9UQK1 317 aa11.21□□□□□ -0.62
CKAP2-202ENST00000378034 TPRKBQ9Y3C4 175 aa11.21□□□□□ -0.62
CKAP2-202ENST00000378034 RHBDD3Q9Y3P4 386 aa11.21□□□□□ -0.62
CKAP2-202ENST00000378034 ANXA2P2A6NMY6 339 aa11.2□□□□□ -0.62
CKAP2-202ENST00000378034 CLDN25C9JDP6 229 aa11.2□□□□□ -0.62
CKAP2-202ENST00000378034 RNF223E7ERA6 249 aa11.2□□□□□ -0.62
CKAP2-202ENST00000378034 SLC1A7O00341 560 aa11.2□□□□□ -0.62
CKAP2-202ENST00000378034 P2RY10O00398 339 aa11.2□□□□□ -0.62
CKAP2-202ENST00000378034 KIR3DL2P43630 455 aa11.2□□□□□ -0.62
CKAP2-202ENST00000378034 MAB21L1Q13394 359 aa11.2□□□□□ -0.62
CKAP2-202ENST00000378034 ALKBH1Q13686 389 aaKnown RBP11.2□□□□□ -0.62
CKAP2-202ENST00000378034 ZNF181Q2M3W8 571 aa11.2□□□□□ -0.62
CKAP2-202ENST00000378034 CCDC58Q4VC31 144 aa11.2□□□□□ -0.62
CKAP2-202ENST00000378034 SPRNQ5BIV9 151 aa11.2□□□□□ -0.62
CKAP2-202ENST00000378034 RNLSQ5VYX0 342 aa11.2□□□□□ -0.62
CKAP2-202ENST00000378034 AHSA2Q719I0 299 aa11.2□□□□□ -0.62
CKAP2-202ENST00000378034 OR52N1Q8NH53 320 aa11.2□□□□□ -0.62
CKAP2-202ENST00000378034 CCL17Q92583 94 aa11.2□□□□□ -0.62
CKAP2-202ENST00000378034 MYDGFQ969H8 173 aa11.2□□□□□ -0.62
CKAP2-202ENST00000378034 BPESC1Q9GZL8 116 aa11.2□□□□□ -0.62
CKAP2-202ENST00000378034 GCM1Q9NP62 436 aa11.2□□□□□ -0.62
CKAP2-202ENST00000378034 FRRS1LQ9P0K9 344 aa11.2□□□□□ -0.62
CKAP2-202ENST00000378034 ENPP5Q9UJA9 477 aa11.2□□□□□ -0.62
CKAP2-202ENST00000378034 A0A096LNT2 108 aa11.19□□□□□ -0.62
CKAP2-202ENST00000378034 SYT7O43581 403 aa11.19□□□□□ -0.62
CKAP2-202ENST00000378034 USF1P22415 310 aaPredicted RBP11.19□□□□□ -0.62
CKAP2-202ENST00000378034 PEG10Q86TG7 708 aaKnown RBP11.19□□□□□ -0.62
CKAP2-202ENST00000378034 OR14K1Q8NGZ2 314 aa11.19□□□□□ -0.62
CKAP2-202ENST00000378034 Q8TCH9 128 aa11.19□□□□□ -0.62
CKAP2-202ENST00000378034 HPS1Q92902 700 aa11.19□□□□□ -0.62
CKAP2-202ENST00000378034 RAB1CQ92928 201 aa11.19□□□□□ -0.62
CKAP2-202ENST00000378034 C10orf35Q96D05 121 aa11.19□□□□□ -0.62
CKAP2-202ENST00000378034 TIMD4Q96H15 378 aa11.19□□□□□ -0.62
CKAP2-202ENST00000378034 MICU1Q9BPX6 476 aa11.19□□□□□ -0.62
CKAP2-202ENST00000378034 TMEM106BQ9NUM4 274 aa11.19□□□□□ -0.62
CKAP2-202ENST00000378034 PIGLQ9Y2B2 252 aa11.19□□□□□ -0.62
CKAP2-202ENST00000378034 LRRC30A6NM36 301 aa11.19□□□□□ -0.62
CKAP2-202ENST00000378034 PPIHO43447 177 aaKnown RBP11.19□□□□□ -0.62
CKAP2-202ENST00000378034 DENRO43583 198 aaKnown RBP11.19□□□□□ -0.62
CKAP2-202ENST00000378034 CDK1P06493 297 aa11.19□□□□□ -0.62
CKAP2-202ENST00000378034 INHBBP09529 407 aa11.19□□□□□ -0.62
CKAP2-202ENST00000378034 CDH15P55291 814 aa11.19□□□□□ -0.62
CKAP2-202ENST00000378034 NANOS3P60323 173 aaKnown RBP11.19□□□□□ -0.62
CKAP2-202ENST00000378034 PRDX4Q13162 271 aa11.19□□□□□ -0.62
CKAP2-202ENST00000378034 ZDHHC23Q8IYP9 409 aa11.19□□□□□ -0.62
CKAP2-202ENST00000378034 PIGCQ92535 297 aa11.19□□□□□ -0.62
CKAP2-202ENST00000378034 ITPKCQ96DU7 683 aa11.19□□□□□ -0.62
CKAP2-202ENST00000378034 CNBD2Q96M20 576 aa11.19□□□□□ -0.62
CKAP2-202ENST00000378034 HIST1H2AAQ96QV6 131 aa11.19□□□□□ -0.62
CKAP2-202ENST00000378034 RTL8AQ9BWD3 113 aa11.19□□□□□ -0.62
CKAP2-202ENST00000378034 FN3KRPQ9HA64 309 aa11.19□□□□□ -0.62
CKAP2-202ENST00000378034 BABAM2Q9NXR7 383 aa11.19□□□□□ -0.62
CKAP2-202ENST00000378034 DYSFO75923 2080 aa11.19□□□□□ -0.62
CKAP2-202ENST00000378034 TMEM212A6NML5 194 aa11.18□□□□□ -0.62
CKAP2-202ENST00000378034 OR4C45A6NMZ5 311 aa11.18□□□□□ -0.62
CKAP2-202ENST00000378034 ZNF850A8MQ14 1090 aa11.18□□□□□ -0.62
CKAP2-202ENST00000378034 CHN2P52757 468 aa11.18□□□□□ -0.62
CKAP2-202ENST00000378034 MVKQ03426 396 aa11.18□□□□□ -0.62
CKAP2-202ENST00000378034 ODF4Q2M2E3 257 aa11.18□□□□□ -0.62
CKAP2-202ENST00000378034 RBM48Q5RL73 367 aaKnown RBP11.18□□□□□ -0.62
CKAP2-202ENST00000378034 RPL22L1Q6P5R6 122 aaKnown RBP11.18□□□□□ -0.62
CKAP2-202ENST00000378034 C1orf87Q8N0U7 546 aa11.18□□□□□ -0.62
CKAP2-202ENST00000378034 CIARTQ8N365 385 aaPredicted RBP11.18□□□□□ -0.62
CKAP2-202ENST00000378034 OR11L1Q8NGX0 322 aa11.18□□□□□ -0.62
CKAP2-202ENST00000378034 OR5P3Q8WZ94 311 aa11.18□□□□□ -0.62
CKAP2-202ENST00000378034 DUSP21Q9H596 190 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms