RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 TRAV8-7A0A075B6U6 113 aa10.85□□□□□ -0.67
VRK3-202ENST00000377011 A0A0A6YYH2 397 aa10.85□□□□□ -0.67
VRK3-202ENST00000377011 LOC100289279A0A1B0GTE1 492 aa10.85□□□□□ -0.67
VRK3-202ENST00000377011 A0A1W2PPL8 197 aa10.85□□□□□ -0.67
VRK3-202ENST00000377011 PLSCR5A0PG75 271 aa10.85□□□□□ -0.67
VRK3-202ENST00000377011 PRSS37A4D1T9 235 aa10.85□□□□□ -0.67
VRK3-202ENST00000377011 A6NJ64 397 aa10.85□□□□□ -0.67
VRK3-202ENST00000377011 HMSDA8MTL9 139 aa10.85□□□□□ -0.67
VRK3-202ENST00000377011 NPIPB7O75200 414 aa10.85□□□□□ -0.67
VRK3-202ENST00000377011 ENPP1P22413 925 aa10.85□□□□□ -0.67
VRK3-202ENST00000377011 RAD52P43351 418 aa10.85□□□□□ -0.67
VRK3-202ENST00000377011 KIR3DL2P43630 455 aa10.85□□□□□ -0.67
VRK3-202ENST00000377011 POLR2HP52434 150 aaKnown RBP10.85□□□□□ -0.67
VRK3-202ENST00000377011 TSPAN5P62079 268 aa10.85□□□□□ -0.67
VRK3-202ENST00000377011 MFSD13AQ14CX5 517 aa10.85□□□□□ -0.67
VRK3-202ENST00000377011 RAB11BQ15907 218 aa10.85□□□□□ -0.67
VRK3-202ENST00000377011 SLC25A53Q5H9E4 307 aa10.85□□□□□ -0.67
VRK3-202ENST00000377011 FAM166AQ6J272 317 aa10.85□□□□□ -0.67
VRK3-202ENST00000377011 ZNF474Q6S9Z5 364 aaPredicted RBP10.85□□□□□ -0.67
VRK3-202ENST00000377011 SERPINA12Q8IW75 414 aa10.85□□□□□ -0.67
VRK3-202ENST00000377011 CNEP1R1Q8N9A8 125 aa10.85□□□□□ -0.67
VRK3-202ENST00000377011 OR6N1Q8NGY5 312 aa10.85□□□□□ -0.67
VRK3-202ENST00000377011 OR2V1Q8NHB1 315 aa10.85□□□□□ -0.67
VRK3-202ENST00000377011 STK35Q8TDR2 534 aa10.85□□□□□ -0.67
VRK3-202ENST00000377011 OR11A1Q9GZK7 315 aa10.85□□□□□ -0.67
VRK3-202ENST00000377011 ALX4Q9H161 411 aaPredicted RBP10.85□□□□□ -0.67
VRK3-202ENST00000377011 SYT4Q9H2B2 425 aa10.85□□□□□ -0.67
VRK3-202ENST00000377011 TXNIPQ9H3M7 391 aa10.85□□□□□ -0.67
VRK3-202ENST00000377011 SCPEP1Q9HB40 452 aa10.85□□□□□ -0.67
VRK3-202ENST00000377011 MRPL15Q9P015 296 aaKnown RBP10.85□□□□□ -0.67
VRK3-202ENST00000377011 ZNF629Q9UEG4 869 aaPredicted RBP10.85□□□□□ -0.67
VRK3-202ENST00000377011 B9D1Q9UPM9 204 aa10.85□□□□□ -0.67
VRK3-202ENST00000377011 ANKRD17O75179 2603 aaKnown RBP10.85□□□□□ -0.67
VRK3-202ENST00000377011 TVP23AA6NH52 213 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 NPIPB13A6NJU9 1138 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 ZNF814B7Z6K7 855 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 NPIPB4C9JG80 1138 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 CTAG2O75638 210 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 CGAP01215 116 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 ALDOBP05062 364 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 AKAIN1P0CW23 69 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 CALCRP30988 508 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 DCTDP32321 178 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 SUMO3P55854 103 aaPredicted RBP10.84□□□□□ -0.67
VRK3-202ENST00000377011 ACTBP60709 375 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 PSMA6P60900 246 aaKnown RBP10.84□□□□□ -0.67
VRK3-202ENST00000377011 ACTG1P63261 375 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 NHLRC3Q5JS37 347 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 WDR38Q5JTN6 314 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 SLC36A1Q7Z2H8 476 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 P4HA3Q7Z4N8 544 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 KRT77Q7Z794 578 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 GPAT4Q86UL3 456 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 SLC51BQ86UW2 128 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 LINC01560Q8TB33 94 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 ABHD3Q8WU67 409 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 TSEN15Q8WW01 171 aaKnown RBP10.84□□□□□ -0.67
VRK3-202ENST00000377011 NRGNQ92686 78 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 RBPMSQ93062 196 aaKnown RBP10.84□□□□□ -0.67
VRK3-202ENST00000377011 ARL5BQ96KC2 179 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 SPOCK3Q9BQ16 436 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 SLCO5A1Q9H2Y9 848 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 CRIM1Q9NZV1 1036 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 ZNF69Q9UC07 566 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 ING1Q9UK53 422 aaPredicted RBP10.84□□□□□ -0.67
VRK3-202ENST00000377011 ZNF469Q96JG9 3925 aaPredicted RBP10.84□□□□□ -0.67
VRK3-202ENST00000377011 IGLV1-36A0A0B4J1U3 117 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 CIB4A0PJX0 185 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 MEGF11A6BM72 1044 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 A8MVM7 634 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 L7N2F9 121 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 RAMP1O60894 148 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 CD2P06729 351 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 NFYAP23511 347 aaPredicted RBP10.84□□□□□ -0.67
VRK3-202ENST00000377011 MAGEB1P43366 347 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 MAP2K6P52564 334 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 FAM27E3Q08E93 113 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 GRINAQ7Z429 371 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 GCDHQ92947 438 aaPredicted RBP10.84□□□□□ -0.67
VRK3-202ENST00000377011 ZNF775Q96BV0 537 aaPredicted RBP10.84□□□□□ -0.67
VRK3-202ENST00000377011 MRGPRX4Q96LA9 322 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 SEC22CQ9BRL7 303 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 PTDSS2Q9BVG9 487 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 ELOVL3Q9HB03 270 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 MYOZ1Q9NP98 299 aaPredicted RBP10.84□□□□□ -0.67
VRK3-202ENST00000377011 UPB1Q9UBR1 384 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 CKLFQ9UBR5 152 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 SESN1Q9Y6P5 492 aa10.84□□□□□ -0.67
VRK3-202ENST00000377011 A6NIZ1 184 aa10.83□□□□□ -0.68
VRK3-202ENST00000377011 A8MXE2 369 aa10.83□□□□□ -0.68
VRK3-202ENST00000377011 H7C1C5 153 aa10.83□□□□□ -0.68
VRK3-202ENST00000377011 LINC01387J3KSC0 135 aa10.83□□□□□ -0.68
VRK3-202ENST00000377011 OR2T1O43869 369 aa10.83□□□□□ -0.68
VRK3-202ENST00000377011 B3GALNT1O75752 331 aa10.83□□□□□ -0.68
VRK3-202ENST00000377011 MAS1P04201 325 aa10.83□□□□□ -0.68
VRK3-202ENST00000377011 CRABP1P29762 137 aa10.83□□□□□ -0.68
VRK3-202ENST00000377011 SSTR2P30874 369 aa10.83□□□□□ -0.68
VRK3-202ENST00000377011 CCKARP32238 428 aa10.83□□□□□ -0.68
VRK3-202ENST00000377011 PRSS3P35030 304 aa10.83□□□□□ -0.68
VRK3-202ENST00000377011 ASCL1P50553 236 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms