RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 SEH1LQ96EE3 360 aa12.99□□□□□ -0.33
SDHB-201ENST00000375499 NEIL1Q96FI4 390 aaPredicted RBP12.99□□□□□ -0.33
SDHB-201ENST00000375499 OR8B4Q96RC9 309 aa12.99□□□□□ -0.33
SDHB-201ENST00000375499 CNN2Q99439 309 aaKnown RBP12.99□□□□□ -0.33
SDHB-201ENST00000375499 SLC6A7Q99884 636 aa12.99□□□□□ -0.33
SDHB-201ENST00000375499 OSBPL10Q9BXB5 764 aa12.99□□□□□ -0.33
SDHB-201ENST00000375499 GABARAPL3Q9BY60 117 aa12.99□□□□□ -0.33
SDHB-201ENST00000375499 IGHV3OR15-7A0A075B7D8 119 aa12.98□□□□□ -0.33
SDHB-201ENST00000375499 IGHV2-70DA0A0C4DH43 119 aa12.98□□□□□ -0.33
SDHB-201ENST00000375499 hCG_1807616A0A1W2PRN6 198 aa12.98□□□□□ -0.33
SDHB-201ENST00000375499 C22orf46C9J442 243 aa12.98□□□□□ -0.33
SDHB-201ENST00000375499 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.98□□□□□ -0.33
SDHB-201ENST00000375499 LGALS8O00214 317 aa12.98□□□□□ -0.33
SDHB-201ENST00000375499 TNFRSF13BO14836 293 aaPredicted RBP12.98□□□□□ -0.33
SDHB-201ENST00000375499 SRSF10O75494 262 aaKnown RBP12.98□□□□□ -0.33
SDHB-201ENST00000375499 APOL3O95236 402 aa12.98□□□□□ -0.33
SDHB-201ENST00000375499 LHBP01229 141 aa12.98□□□□□ -0.33
SDHB-201ENST00000375499 PSMB10P40306 273 aa12.98□□□□□ -0.33
SDHB-201ENST00000375499 PITPNBP48739 271 aa12.98□□□□□ -0.33
SDHB-201ENST00000375499 GNB2P62879 340 aa12.98□□□□□ -0.33
SDHB-201ENST00000375499 ROM1Q03395 351 aa12.98□□□□□ -0.33
SDHB-201ENST00000375499 PAX8Q06710 450 aa12.98□□□□□ -0.33
SDHB-201ENST00000375499 POU4F2Q12837 409 aa12.98□□□□□ -0.33
SDHB-201ENST00000375499 DMRTC1Q5HYR2 192 aa12.98□□□□□ -0.33
SDHB-201ENST00000375499 WDR25Q64LD2 544 aaPredicted RBP12.98□□□□□ -0.33
SDHB-201ENST00000375499 SSX6Q7RTT6 188 aa12.98□□□□□ -0.33
SDHB-201ENST00000375499 FAM90A1Q86YD7 464 aa12.98□□□□□ -0.33
SDHB-201ENST00000375499 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.98□□□□□ -0.33
SDHB-201ENST00000375499 C3orf56Q8N813 242 aa12.98□□□□□ -0.33
SDHB-201ENST00000375499 SPERTQ8NA61 448 aa12.98□□□□□ -0.33
SDHB-201ENST00000375499 PLPP7Q8NBV4 271 aa12.98□□□□□ -0.33
SDHB-201ENST00000375499 OR8B3Q8NGG8 313 aa12.98□□□□□ -0.33
SDHB-201ENST00000375499 OR8S1Q8NH09 359 aa12.98□□□□□ -0.33
SDHB-201ENST00000375499 NANPQ8TBE9 248 aa12.98□□□□□ -0.33
SDHB-201ENST00000375499 OR8B2Q96RD0 313 aa12.98□□□□□ -0.33
SDHB-201ENST00000375499 RIBC2Q9H4K1 309 aa12.98□□□□□ -0.33
SDHB-201ENST00000375499 RGCCQ9H4X1 137 aa12.98□□□□□ -0.33
SDHB-201ENST00000375499 SP140LQ9H930 580 aa12.98□□□□□ -0.33
SDHB-201ENST00000375499 SMURF1Q9HCE7 757 aa12.98□□□□□ -0.33
SDHB-201ENST00000375499 OR5V1Q9UGF6 321 aa12.98□□□□□ -0.33
SDHB-201ENST00000375499 MGAM2Q2M2H8 2515 aa12.98□□□□□ -0.33
SDHB-201ENST00000375499 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.97□□□□□ -0.33
SDHB-201ENST00000375499 A0A1B0GW55 424 aa12.97□□□□□ -0.33
SDHB-201ENST00000375499 OOEPA6NGQ2 149 aa12.97□□□□□ -0.33
SDHB-201ENST00000375499 ZNF850A8MQ14 1090 aa12.97□□□□□ -0.33
SDHB-201ENST00000375499 IGLV3-1P01715 115 aa12.97□□□□□ -0.33
SDHB-201ENST00000375499 GYPAP02724 150 aa12.97□□□□□ -0.33
SDHB-201ENST00000375499 DUX4L2P0CJ85 424 aa12.97□□□□□ -0.33
SDHB-201ENST00000375499 DUX4L3P0CJ86 424 aa12.97□□□□□ -0.33
SDHB-201ENST00000375499 DUX4L4P0CJ87 422 aa12.97□□□□□ -0.33
SDHB-201ENST00000375499 DUX4L5P0CJ88 424 aa12.97□□□□□ -0.33
SDHB-201ENST00000375499 DUX4L6P0CJ89 424 aa12.97□□□□□ -0.33
SDHB-201ENST00000375499 DUX4L7P0CJ90 424 aa12.97□□□□□ -0.33
SDHB-201ENST00000375499 CFL1P23528 166 aaKnown RBP12.97□□□□□ -0.33
SDHB-201ENST00000375499 CXCR4P61073 352 aa12.97□□□□□ -0.33
SDHB-201ENST00000375499 PRDX4Q13162 271 aa12.97□□□□□ -0.33
SDHB-201ENST00000375499 TUSC1Q2TAM9 212 aa12.97□□□□□ -0.33
SDHB-201ENST00000375499 DUX4L9Q6RFH8 374 aaPredicted RBP12.97□□□□□ -0.33
SDHB-201ENST00000375499 WDR82Q6UXN9 313 aa12.97□□□□□ -0.33
SDHB-201ENST00000375499 CCDC121Q6ZUS5 278 aa12.97□□□□□ -0.33
SDHB-201ENST00000375499 SLC35F2Q8IXU6 374 aa12.97□□□□□ -0.33
SDHB-201ENST00000375499 ZNF679Q8IYX0 411 aa12.97□□□□□ -0.33
SDHB-201ENST00000375499 FGFRL1Q8N441 504 aa12.97□□□□□ -0.33
SDHB-201ENST00000375499 CSNK2A3Q8NEV1 391 aa12.97□□□□□ -0.33
SDHB-201ENST00000375499 LRRC29Q8WV35 223 aa12.97□□□□□ -0.33
SDHB-201ENST00000375499 APOL4Q9BPW4 351 aa12.97□□□□□ -0.33
SDHB-201ENST00000375499 PRRG3Q9BZD7 231 aa12.97□□□□□ -0.33
SDHB-201ENST00000375499 NIPAL2Q9H841 368 aa12.97□□□□□ -0.33
SDHB-201ENST00000375499 ESM1Q9NQ30 184 aa12.97□□□□□ -0.33
SDHB-201ENST00000375499 DUX4Q9UBX2 424 aa12.97□□□□□ -0.33
SDHB-201ENST00000375499 SOX21Q9Y651 276 aaPredicted RBP12.97□□□□□ -0.33
SDHB-201ENST00000375499 AUP1Q9Y679 476 aa12.97□□□□□ -0.33
SDHB-201ENST00000375499 IGHV3OR16-10A0A075B7F0 116 aa12.96□□□□□ -0.33
SDHB-201ENST00000375499 TMEM269A0A1B0GVZ9 245 aa12.96□□□□□ -0.33
SDHB-201ENST00000375499 SLC22A31A6NKX4 558 aa12.96□□□□□ -0.33
SDHB-201ENST00000375499 EI24O14681 340 aa12.96□□□□□ -0.33
SDHB-201ENST00000375499 PHYHO14832 338 aa12.96□□□□□ -0.33
SDHB-201ENST00000375499 HILS1P60008 231 aa12.96□□□□□ -0.33
SDHB-201ENST00000375499 KCTD18Q6PI47 426 aaPredicted RBP12.96□□□□□ -0.33
SDHB-201ENST00000375499 DEGS2Q6QHC5 323 aa12.96□□□□□ -0.33
SDHB-201ENST00000375499 ZNF322Q6U7Q0 402 aaPredicted RBP12.96□□□□□ -0.33
SDHB-201ENST00000375499 NLRC3Q7RTR2 1065 aa12.96□□□□□ -0.33
SDHB-201ENST00000375499 BCL6BQ8N143 479 aaPredicted RBP12.96□□□□□ -0.33
SDHB-201ENST00000375499 TEX29Q8N6K0 151 aa12.96□□□□□ -0.33
SDHB-201ENST00000375499 OR51G2Q8NGK0 314 aa12.96□□□□□ -0.33
SDHB-201ENST00000375499 MROQ9BYG7 248 aa12.96□□□□□ -0.33
SDHB-201ENST00000375499 PBOV1Q9GZY1 135 aa12.96□□□□□ -0.33
SDHB-201ENST00000375499 TLNRD1Q9H1K6 362 aa12.96□□□□□ -0.33
SDHB-201ENST00000375499 RASSF4Q9H2L5 321 aa12.96□□□□□ -0.33
SDHB-201ENST00000375499 C14orf119Q9NWQ9 140 aa12.96□□□□□ -0.33
SDHB-201ENST00000375499 CLN8Q9UBY8 286 aa12.96□□□□□ -0.33
SDHB-201ENST00000375499 ZNF69Q9UC07 566 aa12.96□□□□□ -0.33
SDHB-201ENST00000375499 MRM2Q9UI43 246 aaKnown RBP12.96□□□□□ -0.33
SDHB-201ENST00000375499 IKZF2Q9UKS7 526 aa12.96□□□□□ -0.33
SDHB-201ENST00000375499 A0A0U1RQV5 110 aa12.95□□□□□ -0.34
SDHB-201ENST00000375499 TMEM89A2RUT3 159 aa12.95□□□□□ -0.34
SDHB-201ENST00000375499 E9PQ18 207 aa12.95□□□□□ -0.34
SDHB-201ENST00000375499 CDIPTO14735 213 aa12.95□□□□□ -0.34
SDHB-201ENST00000375499 ADAM20O43506 726 aa12.95□□□□□ -0.34
SDHB-201ENST00000375499 CST4P01036 141 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms