RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 NKPD1Q17RQ9 610 aa10.78□□□□□ -0.68
UBR4-203ENST00000375225 PLEKHN1Q494U1 663 aaPredicted RBP10.78□□□□□ -0.68
UBR4-203ENST00000375225 PDSS1Q5T2R2 415 aa10.78□□□□□ -0.68
UBR4-203ENST00000375225 C1QTNF12Q5T7M4 302 aa10.78□□□□□ -0.68
UBR4-203ENST00000375225 CD163Q86VB7 1156 aa10.78□□□□□ -0.68
UBR4-203ENST00000375225 WDFY1Q8IWB7 410 aa10.78□□□□□ -0.68
UBR4-203ENST00000375225 PDZD9Q8IXQ8 264 aa10.78□□□□□ -0.68
UBR4-203ENST00000375225 ARMC10Q8N2F6 343 aa10.78□□□□□ -0.68
UBR4-203ENST00000375225 OR13C8Q8NGS7 320 aa10.78□□□□□ -0.68
UBR4-203ENST00000375225 OR5H2Q8NGV7 314 aa10.78□□□□□ -0.68
UBR4-203ENST00000375225 OR14K1Q8NGZ2 314 aa10.78□□□□□ -0.68
UBR4-203ENST00000375225 THAP6Q8TBB0 222 aa10.78□□□□□ -0.68
UBR4-203ENST00000375225 MITD1Q8WV92 249 aa10.78□□□□□ -0.68
UBR4-203ENST00000375225 RBPMSQ93062 196 aaKnown RBP10.78□□□□□ -0.68
UBR4-203ENST00000375225 JSRP1Q96MG2 331 aaPredicted RBP10.78□□□□□ -0.68
UBR4-203ENST00000375225 ZNF416Q9BWM5 594 aa10.78□□□□□ -0.68
UBR4-203ENST00000375225 CHST6Q9GZX3 395 aa10.78□□□□□ -0.68
UBR4-203ENST00000375225 LPAR5Q9H1C0 372 aa10.78□□□□□ -0.68
UBR4-203ENST00000375225 SLC25A32Q9H2D1 315 aa10.78□□□□□ -0.68
UBR4-203ENST00000375225 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.78□□□□□ -0.68
UBR4-203ENST00000375225 ZNF391Q9UJN7 358 aa10.78□□□□□ -0.68
UBR4-203ENST00000375225 ANAPC10Q9UM13 185 aa10.78□□□□□ -0.68
UBR4-203ENST00000375225 HRH3Q9Y5N1 445 aa10.78□□□□□ -0.68
UBR4-203ENST00000375225 HS3ST3B1Q9Y662 390 aa10.78□□□□□ -0.68
UBR4-203ENST00000375225 SPAARA0A1B0GVQ0 90 aa10.77□□□□□ -0.69
UBR4-203ENST00000375225 C9orf170A2RU37 121 aa10.77□□□□□ -0.69
UBR4-203ENST00000375225 OR5H14A6NHG9 310 aa10.77□□□□□ -0.69
UBR4-203ENST00000375225 PROB1E7EW31 1015 aa10.77□□□□□ -0.69
UBR4-203ENST00000375225 KLF7O75840 302 aaPredicted RBP10.77□□□□□ -0.69
UBR4-203ENST00000375225 DUS4LO95620 317 aaKnown RBP10.77□□□□□ -0.69
UBR4-203ENST00000375225 WDPCPO95876 746 aa10.77□□□□□ -0.69
UBR4-203ENST00000375225 CFDP00746 253 aaPredicted RBP10.77□□□□□ -0.69
UBR4-203ENST00000375225 ABOP16442 354 aa10.77□□□□□ -0.69
UBR4-203ENST00000375225 GNB3P16520 340 aa10.77□□□□□ -0.69
UBR4-203ENST00000375225 TCN2P20062 427 aa10.77□□□□□ -0.69
UBR4-203ENST00000375225 ZBTB25P24278 435 aa10.77□□□□□ -0.69
UBR4-203ENST00000375225 SLC6A9P48067 706 aa10.77□□□□□ -0.69
UBR4-203ENST00000375225 RAC3P60763 192 aa10.77□□□□□ -0.69
UBR4-203ENST00000375225 ARFRP1Q13795 201 aa10.77□□□□□ -0.69
UBR4-203ENST00000375225 C11orf87Q6NUJ2 197 aa10.77□□□□□ -0.69
UBR4-203ENST00000375225 OR5AS1Q8N127 324 aa10.77□□□□□ -0.69
UBR4-203ENST00000375225 INO80EQ8NBZ0 244 aaPredicted RBP10.77□□□□□ -0.69
UBR4-203ENST00000375225 CT55Q8WUE5 264 aa10.77□□□□□ -0.69
UBR4-203ENST00000375225 NUDCD2Q8WVJ2 157 aa10.77□□□□□ -0.69
UBR4-203ENST00000375225 OCSTAMPQ9BR26 566 aa10.77□□□□□ -0.69
UBR4-203ENST00000375225 RBM24Q9BX46 236 aaKnown RBP10.77□□□□□ -0.69
UBR4-203ENST00000375225 FAM117AQ9C073 453 aa10.77□□□□□ -0.69
UBR4-203ENST00000375225 SH2D2AQ9NP31 389 aa10.77□□□□□ -0.69
UBR4-203ENST00000375225 ZNF224Q9NZL3 707 aa10.77□□□□□ -0.69
UBR4-203ENST00000375225 FLVCR1Q9Y5Y0 555 aa10.77□□□□□ -0.69
UBR4-203ENST00000375225 V9GYS6 101 aa10.77□□□□□ -0.69
UBR4-203ENST00000375225 FRYLO94915 3013 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 A0A0B4J2A0 478 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 PMS2P1A4D2B8 440 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 PCNX2A6NKB5 2137 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 SERPINE3A8MV23 424 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 C21orf140B9A014 251 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 KRBOX1C9JBD0 128 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 LINC01387J3KSC0 135 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 TNFSF15O95150 251 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 IGLV3-1P01715 115 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 CCL3P10147 92 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 ENPP1P22413 925 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 CPT2P23786 658 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 NUP62P37198 522 aaPredicted RBP10.76□□□□□ -0.69
UBR4-203ENST00000375225 CD96P40200 585 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 OR3A2P47893 321 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 PCBD1P61457 104 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 HIST1H3AP68431 136 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 MRPS34P82930 218 aaKnown RBP10.76□□□□□ -0.69
UBR4-203ENST00000375225 OC90Q02509 493 aaPredicted RBP10.76□□□□□ -0.69
UBR4-203ENST00000375225 SCRN3Q0VDG4 424 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 CHAF1BQ13112 559 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 CAMK2BQ13554 666 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 CNN3Q15417 329 aaKnown RBP10.76□□□□□ -0.69
UBR4-203ENST00000375225 INPP5JQ15735 1006 aaPredicted RBP10.76□□□□□ -0.69
UBR4-203ENST00000375225 GFOD2Q3B7J2 385 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 HIST2H3PS2Q5TEC6 136 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 DCAF12L2Q5VW00 463 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 DRAM2Q6UX65 266 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 Q6ZSR3 168 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 HIST2H3AQ71DI3 136 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 C20orf196Q8IYI0 205 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 OR4S1Q8NGB4 309 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 OR51T1Q8NGJ9 327 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 TERB2Q8NHR7 220 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 COQ8AQ8NI60 647 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 PHYHIPLQ96FC7 376 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 NKX3-1Q99801 234 aaPredicted RBP10.76□□□□□ -0.69
UBR4-203ENST00000375225 DHRS9Q9BPW9 319 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 PCDHB16Q9NRJ7 776 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 FOXJ2Q9P0K8 574 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 SHPKQ9UHJ6 478 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 TCFL5Q9UL49 500 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 VSIG4Q9Y279 399 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 MRPS18CQ9Y3D5 142 aaKnown RBP10.76□□□□□ -0.69
UBR4-203ENST00000375225 WDR87Q6ZQQ6 2873 aa10.76□□□□□ -0.69
UBR4-203ENST00000375225 ZNF814B7Z6K7 855 aa10.75□□□□□ -0.69
UBR4-203ENST00000375225 B8ZZF3 427 aa10.75□□□□□ -0.69
UBR4-203ENST00000375225 STMND1H3BQB6 276 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms