RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 TAS2R19P59542 299 aa15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 RIPPLY1Q0D2K3 151 aa15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 KCNJ8Q15842 424 aa15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 LINC00303Q3SY05 128 aa15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 COLCA1Q6ZS62 124 aa15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 FGD2Q7Z6J4 655 aa15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 OR2AE1Q8NHA4 323 aa15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 GPER1Q99527 375 aa15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 GAL3ST1Q99999 423 aa15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 LPAR5Q9H1C0 372 aa15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 B3GNT2Q9NY97 397 aa15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 hCG_38984A0A1B0GV85 526 aa15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 XRCC2O43543 280 aa15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 CDC14BO60729 498 aa15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 GTF2F2P13984 249 aa15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 ACKR3P25106 362 aa15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 CD83Q01151 205 aa15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 CBX3Q13185 183 aa15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 CD276Q5ZPR3 534 aa15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 DPPA2Q7Z7J5 298 aa15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 CPEB3Q8NE35 698 aaKnown RBP15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 OR10R2Q8NGX6 335 aa15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 GIMAP1Q8WWP7 306 aa15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 SPSB4Q96A44 273 aa15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 SPSB1Q96BD6 273 aa15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 FYTTD1Q96QD9 318 aaKnown RBP15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 TRAF4Q9BUZ4 470 aaPredicted RBP15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 MED28Q9H204 178 aa15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 OR51J1Q9H342 316 aa15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 ING3Q9NXR8 418 aa15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 A0A1B0GUH1 482 aa15.66■□□□□ 0.1
HLA-DQB1-201ENST00000374943 AQP7O14520 342 aa15.66■□□□□ 0.1
HLA-DQB1-201ENST00000374943 ICMTO60725 284 aa15.66■□□□□ 0.1
HLA-DQB1-201ENST00000374943 SDHBP21912 280 aa15.66■□□□□ 0.1
HLA-DQB1-201ENST00000374943 STOMP27105 288 aa15.66■□□□□ 0.1
HLA-DQB1-201ENST00000374943 PTGFRP43088 359 aa15.66■□□□□ 0.1
HLA-DQB1-201ENST00000374943 FOXG1P55316 489 aaPredicted RBP15.66■□□□□ 0.1
HLA-DQB1-201ENST00000374943 TNK1Q13470 666 aa15.66■□□□□ 0.1
HLA-DQB1-201ENST00000374943 TMEM42Q69YG0 159 aa15.66■□□□□ 0.1
HLA-DQB1-201ENST00000374943 FAAP20Q6NZ36 180 aa15.66■□□□□ 0.1
HLA-DQB1-201ENST00000374943 Q6ZTK2 550 aa15.66■□□□□ 0.1
HLA-DQB1-201ENST00000374943 GABRG1Q8N1C3 465 aa15.66■□□□□ 0.1
HLA-DQB1-201ENST00000374943 GMPPAQ96IJ6 420 aaPredicted RBP15.66■□□□□ 0.1
HLA-DQB1-201ENST00000374943 RNF170Q96K19 258 aa15.66■□□□□ 0.1
HLA-DQB1-201ENST00000374943 TMEM59Q9BXS4 323 aa15.66■□□□□ 0.1
HLA-DQB1-201ENST00000374943 NOX3Q9HBY0 568 aa15.66■□□□□ 0.1
HLA-DQB1-201ENST00000374943 GLRX2Q9NS18 164 aa15.66■□□□□ 0.1
HLA-DQB1-201ENST00000374943 CLCF1Q9UBD9 225 aa15.66■□□□□ 0.1
HLA-DQB1-201ENST00000374943 POU2F3Q9UKI9 436 aa15.66■□□□□ 0.1
HLA-DQB1-201ENST00000374943 CACNA1GO43497 2377 aa15.66■□□□□ 0.1
HLA-DQB1-201ENST00000374943 SPTBN2O15020 2390 aa15.65■□□□□ 0.1
HLA-DQB1-201ENST00000374943 TMEM235A6NFC5 223 aa15.65■□□□□ 0.1
HLA-DQB1-201ENST00000374943 SS18L1O75177 396 aaPredicted RBP15.65■□□□□ 0.1
HLA-DQB1-201ENST00000374943 RCVRNP35243 200 aa15.65■□□□□ 0.1
HLA-DQB1-201ENST00000374943 ARR3P36575 388 aa15.65■□□□□ 0.1
HLA-DQB1-201ENST00000374943 OR3A2P47893 321 aa15.65■□□□□ 0.1
HLA-DQB1-201ENST00000374943 NKX2-5P52952 324 aaPredicted RBP15.65■□□□□ 0.1
HLA-DQB1-201ENST00000374943 FAPQ12884 760 aa15.65■□□□□ 0.1
HLA-DQB1-201ENST00000374943 RBMS2Q15434 407 aaKnown RBP15.65■□□□□ 0.1
HLA-DQB1-201ENST00000374943 OR8B8Q15620 311 aa15.65■□□□□ 0.1
HLA-DQB1-201ENST00000374943 STEAP1BQ6NZ63 245 aa15.65■□□□□ 0.1
HLA-DQB1-201ENST00000374943 TMEM104Q8NE00 496 aa15.65■□□□□ 0.1
HLA-DQB1-201ENST00000374943 CPNE2Q96FN4 548 aaPredicted RBP15.65■□□□□ 0.1
HLA-DQB1-201ENST00000374943 CST11Q9H112 138 aa15.65■□□□□ 0.1
HLA-DQB1-201ENST00000374943 DOCK7Q96N67 2140 aa15.65■□□□□ 0.1
HLA-DQB1-201ENST00000374943 TPRP12270 2363 aaKnown RBP15.64■□□□□ 0.09
HLA-DQB1-201ENST00000374943 MEIS3P1A6NDR6 274 aa15.64■□□□□ 0.09
HLA-DQB1-201ENST00000374943 MPIG6BO95866 241 aa15.64■□□□□ 0.09
HLA-DQB1-201ENST00000374943 CD74P04233 296 aa15.64■□□□□ 0.09
HLA-DQB1-201ENST00000374943 CD3DP04234 171 aa15.64■□□□□ 0.09
HLA-DQB1-201ENST00000374943 EDN3P14138 238 aa15.64■□□□□ 0.09
HLA-DQB1-201ENST00000374943 PRKACBP22694 351 aa15.64■□□□□ 0.09
HLA-DQB1-201ENST00000374943 MPGP29372 298 aa15.64■□□□□ 0.09
HLA-DQB1-201ENST00000374943 VEGFCP49767 419 aa15.64■□□□□ 0.09
HLA-DQB1-201ENST00000374943 FAM3AP98173 230 aa15.64■□□□□ 0.09
HLA-DQB1-201ENST00000374943 MAB21L1Q13394 359 aa15.64■□□□□ 0.09
HLA-DQB1-201ENST00000374943 CNN3Q15417 329 aaKnown RBP15.64■□□□□ 0.09
HLA-DQB1-201ENST00000374943 CDNFQ49AH0 187 aa15.64■□□□□ 0.09
HLA-DQB1-201ENST00000374943 ZBTB37Q5TC79 503 aa15.64■□□□□ 0.09
HLA-DQB1-201ENST00000374943 C9orf135Q5VTT2 229 aa15.64■□□□□ 0.09
HLA-DQB1-201ENST00000374943 ZNF782Q6ZMW2 699 aaPredicted RBP15.64■□□□□ 0.09
HLA-DQB1-201ENST00000374943 LIX1LQ8IVB5 337 aa15.64■□□□□ 0.09
HLA-DQB1-201ENST00000374943 ZNF486Q96H40 463 aaPredicted RBP15.64■□□□□ 0.09
HLA-DQB1-201ENST00000374943 MED30Q96HR3 178 aa15.64■□□□□ 0.09
HLA-DQB1-201ENST00000374943 DMRTB1Q96MA1 342 aa15.64■□□□□ 0.09
HLA-DQB1-201ENST00000374943 BEX2Q9BXY8 128 aa15.64■□□□□ 0.09
HLA-DQB1-201ENST00000374943 OR10A4Q9H209 315 aa15.64■□□□□ 0.09
HLA-DQB1-201ENST00000374943 TP63Q9H3D4 680 aaPredicted RBP15.64■□□□□ 0.09
HLA-DQB1-201ENST00000374943 NKIRAS2Q9NYR9 191 aa15.64■□□□□ 0.09
HLA-DQB1-201ENST00000374943 KLK13Q9UKR3 277 aa15.64■□□□□ 0.09
HLA-DQB1-201ENST00000374943 FLVCR2Q9UPI3 526 aa15.64■□□□□ 0.09
HLA-DQB1-201ENST00000374943 A0A096LPE4 126 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 A0A0A6YYD4 124 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 A0A1W2PPZ6 126 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 ARPC1BO15143 372 aaKnown RBP15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 CYB5AP00167 134 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 IL5P05113 134 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 GSTP1P09211 210 aaKnown RBP15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 FCN2Q15485 313 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 ST3GAL2Q16842 350 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms