RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 CCR6P51684 374 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 RIDAP52758 137 aaKnown RBP4.2□□□□□ -1.74
USP48-202ENST00000374730 GLO1Q04760 184 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 SSBP1Q04837 148 aaKnown RBP4.2□□□□□ -1.74
USP48-202ENST00000374730 PUDPQ08623 228 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 CLPPQ16740 277 aaPredicted RBP4.2□□□□□ -1.74
USP48-202ENST00000374730 MEP1BQ16820 701 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 COL28A1Q2UY09 1125 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 NKAIN1Q4KMZ8 207 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 LAMTOR1Q6IAA8 161 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 FAM166AQ6J272 317 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 PAPD4Q6PIY7 484 aaKnown RBP4.2□□□□□ -1.74
USP48-202ENST00000374730 DEGS2Q6QHC5 323 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 TMEM205Q6UW68 189 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 PRSS45Q7RTY3 260 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 TMPRSS12Q86WS5 348 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 CATSPERDQ86XM0 798 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 PRSS58Q8IYP2 241 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 C9orf62Q8N4C0 152 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 SLC26A10Q8NG04 563 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 OR11H7Q8NGC8 314 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 OR5L2Q8NGL0 311 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 OR10AC1Q8NH08 325 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 OR52N5Q8NH56 324 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 OR52I2Q8NH67 350 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 DUSP19Q8WTR2 217 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 THEM6Q8WUY1 208 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 TSEN15Q8WW01 171 aaKnown RBP4.2□□□□□ -1.74
USP48-202ENST00000374730 GIMAP1Q8WWP7 306 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 FCAMRQ8WWV6 532 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 TMEM106AQ96A25 262 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 SLC25A36Q96CQ1 311 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 ORAI1Q96D31 301 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 WDR77Q9BQA1 342 aaPredicted RBP4.2□□□□□ -1.74
USP48-202ENST00000374730 POTEKPQ9BYX7 375 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 SLC26A1Q9H2B4 701 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 RANBP3Q9H6Z4 567 aaPredicted RBP4.2□□□□□ -1.74
USP48-202ENST00000374730 ELOVL3Q9HB03 270 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 PLEKHA2Q9HB19 425 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 HRASLSQ9HDD0 168 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 CHST11Q9NPF2 352 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 ALKBH4Q9NXW9 302 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 PISDQ9UG56 409 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 RARRES3Q9UL19 164 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 ING4Q9UNL4 249 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 OSGIN2Q9Y236 505 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 RCE1Q9Y256 329 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 MRPS7Q9Y2R9 242 aaKnown RBP4.2□□□□□ -1.74
USP48-202ENST00000374730 R4GMQ9 66 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 EML6Q6ZMW3 1958 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 A0A0A6YYH2 397 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 IGHV3-20A0A0C4DH32 117 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 TRBV11-1A0A0K0K1C0 115 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 A0A1B0GTH9 108 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 A0A1W2PQM1 296 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 RPS10-NUDT3A0A1W2PQS6 291 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 CIB4A0PJX0 185 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 GGT3PA6NGU5 568 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 A6NJ64 397 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 LIPT2A6NK58 231 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 SNRPGP15A8MWD9 76 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 NPIPA5E9PKD4 350 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 MS4A18H0YCH9 400 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 H7C417 338 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 SULT1C2O00338 296 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 YKT6O15498 198 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 FABP7O15540 132 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 GMDSO60547 372 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 SLC16A7O60669 478 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 ZNF354AO60765 605 aaPredicted RBP4.19□□□□□ -1.74
USP48-202ENST00000374730 KHDRBS3O75525 346 aaKnown RBP4.19□□□□□ -1.74
USP48-202ENST00000374730 CTAG2O75638 210 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 SCRG1O75711 98 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 ZFAND5O76080 213 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 NDUFB6O95139 128 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 HLA-DQA2P01906 255 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 IL5P05113 134 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 ISG15P05161 165 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 CD2P06729 351 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 CPN1P15169 458 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 FOSL2P15408 326 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 IGFBP3P17936 291 aaPredicted RBP4.19□□□□□ -1.74
USP48-202ENST00000374730 DCTDP32321 178 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 FAUP35544 74 aaKnown RBP4.19□□□□□ -1.74
USP48-202ENST00000374730 RPS27P42677 84 aaKnown RBP4.19□□□□□ -1.74
USP48-202ENST00000374730 CAPZA1P52907 286 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 EMP2P54851 167 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 CLDN12P56749 244 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 FBXW4P57775 412 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 FOXL2P58012 376 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 RPL15P61313 204 aaKnown RBP4.19□□□□□ -1.74
USP48-202ENST00000374730 RPS15P62841 145 aaKnown RBP4.19□□□□□ -1.74
USP48-202ENST00000374730 DCDP81605 110 aaKnown RBP4.19□□□□□ -1.74
USP48-202ENST00000374730 GALK2Q01415 458 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 FOXF1Q12946 379 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 EIF2B1Q14232 305 aaKnown RBP4.19□□□□□ -1.74
USP48-202ENST00000374730 MELKQ14680 651 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 RAB11BQ15907 218 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 ZNF239Q16600 458 aaKnown RBP4.19□□□□□ -1.74
USP48-202ENST00000374730 PLPPR5Q32ZL2 321 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms