RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 ZNF207O43670 478 aaKnown RBP12.92□□□□□ -0.34
TRAF1-201ENST00000373887 PRDX4Q13162 271 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 FZD2Q14332 565 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 TP53I13Q8NBR0 393 aaPredicted RBP12.92□□□□□ -0.34
TRAF1-201ENST00000373887 IP6K3Q96PC2 410 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 NPTNQ9Y639 398 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 A0A1W2PNV4 684 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 CIDEAO60543 219 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 GYPAP02724 150 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 RNF224P0DH78 156 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 HAAOP46952 286 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 ASCL1P50553 236 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 SNRPGP62308 76 aaKnown RBP12.92□□□□□ -0.34
TRAF1-201ENST00000373887 TMEM97Q5BJF2 176 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 ACSM6Q6P461 480 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 MOB3BQ86TA1 216 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 TAAR6Q96RI8 345 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 COL22A1Q8NFW1 1626 aaPredicted RBP12.92□□□□□ -0.34
TRAF1-201ENST00000373887 F5H697 171 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 MEOX1P50221 254 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 MSL2Q9HCI7 577 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 TRAV34A0A0B4J273 112 aa12.91□□□□□ -0.34
TRAF1-201ENST00000373887 M0R135 149 aa12.91□□□□□ -0.34
TRAF1-201ENST00000373887 SPRY1O43609 319 aaPredicted RBP12.91□□□□□ -0.34
TRAF1-201ENST00000373887 NQO2P16083 231 aa12.91□□□□□ -0.34
TRAF1-201ENST00000373887 CNN1P51911 297 aaKnown RBP12.91□□□□□ -0.34
TRAF1-201ENST00000373887 ZNF799Q96GE5 643 aa12.91□□□□□ -0.34
TRAF1-201ENST00000373887 IGHV5-51A0A0C4DH38 117 aa12.91□□□□□ -0.34
TRAF1-201ENST00000373887 PATE3B3GLJ2 98 aa12.91□□□□□ -0.34
TRAF1-201ENST00000373887 E5RGE8 158 aa12.91□□□□□ -0.34
TRAF1-201ENST00000373887 SYT6Q5T7P8 510 aaPredicted RBP12.91□□□□□ -0.34
TRAF1-201ENST00000373887 SMIM12Q96EX1 92 aa12.91□□□□□ -0.34
TRAF1-201ENST00000373887 GAL3ST2Q9H3Q3 398 aa12.91□□□□□ -0.34
TRAF1-201ENST00000373887 TMEM38AQ9H6F2 299 aa12.91□□□□□ -0.34
TRAF1-201ENST00000373887 NSG2Q9Y328 171 aa12.91□□□□□ -0.34
TRAF1-201ENST00000373887 TRAPPC1Q9Y5R8 145 aa12.91□□□□□ -0.34
TRAF1-201ENST00000373887 LRRC3CA6NJW4 275 aa12.91□□□□□ -0.34
TRAF1-201ENST00000373887 AUNIPQ9H7T9 357 aa12.91□□□□□ -0.34
TRAF1-201ENST00000373887 ONECUT1Q9UBC0 465 aa12.91□□□□□ -0.34
TRAF1-201ENST00000373887 FZR1Q9UM11 496 aa12.91□□□□□ -0.34
TRAF1-201ENST00000373887 ZNF195O14628 629 aa12.91□□□□□ -0.34
TRAF1-201ENST00000373887 ONECUT2O95948 504 aa12.91□□□□□ -0.34
TRAF1-201ENST00000373887 GPR3P46089 330 aa12.91□□□□□ -0.34
TRAF1-201ENST00000373887 B4GALNT1Q00973 533 aa12.91□□□□□ -0.34
TRAF1-201ENST00000373887 ZNF766Q5HY98 468 aa12.91□□□□□ -0.34
TRAF1-201ENST00000373887 WIPI1Q5MNZ9 446 aaPredicted RBP12.91□□□□□ -0.34
TRAF1-201ENST00000373887 CMTM4Q8IZR5 234 aa12.91□□□□□ -0.34
TRAF1-201ENST00000373887 NOL4LQ96MY1 436 aaPredicted RBP12.91□□□□□ -0.34
TRAF1-201ENST00000373887 GSX2Q9BZM3 304 aa12.91□□□□□ -0.34
TRAF1-201ENST00000373887 PRSS36Q5K4E3 855 aa12.91□□□□□ -0.34
TRAF1-201ENST00000373887 ORAI1Q96D31 301 aa12.91□□□□□ -0.34
TRAF1-201ENST00000373887 POU2F2P09086 479 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 OR4E1P0C645 316 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 ARR3P36575 388 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 RPL34P49207 117 aaKnown RBP12.9□□□□□ -0.34
TRAF1-201ENST00000373887 TMEM267Q0VDI3 215 aaPredicted RBP12.9□□□□□ -0.34
TRAF1-201ENST00000373887 Q56UQ5 140 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 TOMM20LQ6UXN7 152 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 OR10V1Q8NGI7 309 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 PHYHIPQ92561 330 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 CRISPLD2Q9H0B8 497 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 CD3DP04234 171 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 ACSM4P0C7M7 580 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 TGIF2LXQ8IUE1 241 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 FUNDC1Q8IVP5 155 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 KLHDC1Q8N7A1 406 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 OR1L3Q8NH93 324 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 NDUFB11Q9NX14 153 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 CLEC18AA5D8T8 446 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 AKR7A2O43488 359 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 B4GALT1P15291 398 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 RAB7AP51149 207 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 PPP1CAP62136 330 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 NHLH1Q02575 133 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 NHLH2Q02577 135 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 FAM162BQ5T6X4 162 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 LILRA6Q6PI73 481 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 DGAT2L6Q6ZPD8 337 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 ZNF573Q86YE8 665 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 CLEC18CQ8NCF0 446 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 SLC25A43Q8WUT9 341 aaPredicted RBP12.9□□□□□ -0.34
TRAF1-201ENST00000373887 ZPBPQ9BS86 351 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 TRAPPC4Q9Y296 219 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 SPAARA0A1B0GVQ0 90 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 CD37P11049 281 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 BSGP35613 385 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 OXA1LQ15070 435 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 ETFDHQ16134 617 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 ZDHHC23Q8IYP9 409 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 FBXO17Q96EF6 278 aa12.9□□□□□ -0.34
TRAF1-201ENST00000373887 ING1Q9UK53 422 aaPredicted RBP12.9□□□□□ -0.34
TRAF1-201ENST00000373887 GABRB1P18505 474 aa12.9□□□□□ -0.35
TRAF1-201ENST00000373887 PPICP45877 212 aa12.9□□□□□ -0.35
TRAF1-201ENST00000373887 SLC6A12P48065 614 aa12.9□□□□□ -0.35
TRAF1-201ENST00000373887 SPNS3Q6ZMD2 512 aa12.9□□□□□ -0.35
TRAF1-201ENST00000373887 CADM4Q8NFZ8 388 aa12.9□□□□□ -0.35
TRAF1-201ENST00000373887 DUSP22Q9NRW4 184 aa12.9□□□□□ -0.35
TRAF1-201ENST00000373887 SLC22A13Q9Y226 551 aa12.9□□□□□ -0.35
TRAF1-201ENST00000373887 MTCH2Q9Y6C9 303 aa12.9□□□□□ -0.35
TRAF1-201ENST00000373887 ADAMTSL1Q8N6G6 1762 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms