RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 NBL1P41271 181 aa17.08■□□□□ 0.32
HDAC1-201ENST00000373548 MECP2P51608 486 aaKnown RBP17.08■□□□□ 0.32
HDAC1-201ENST00000373548 PMP22Q01453 160 aa17.08■□□□□ 0.32
HDAC1-201ENST00000373548 RNPS1Q15287 305 aaKnown RBP17.08■□□□□ 0.32
HDAC1-201ENST00000373548 RBMS2Q15434 407 aaKnown RBP17.08■□□□□ 0.32
HDAC1-201ENST00000373548 STK11Q15831 433 aa17.08■□□□□ 0.32
HDAC1-201ENST00000373548 PABPC1L2AQ5JQF8 200 aa17.08■□□□□ 0.32
HDAC1-201ENST00000373548 OR51S1Q8NGJ8 323 aa17.08■□□□□ 0.32
HDAC1-201ENST00000373548 OR10R2Q8NGX6 335 aa17.08■□□□□ 0.32
HDAC1-201ENST00000373548 NUDT16L1Q9BRJ7 211 aaKnown RBP17.08■□□□□ 0.32
HDAC1-201ENST00000373548 BOLA1Q9Y3E2 137 aa17.08■□□□□ 0.32
HDAC1-201ENST00000373548 RIF1Q5UIP0 2472 aaKnown RBP17.07■□□□□ 0.32
HDAC1-201ENST00000373548 ZNF292O60281 2723 aa17.07■□□□□ 0.32
HDAC1-201ENST00000373548 A0A1W2PP11 408 aa17.07■□□□□ 0.32
HDAC1-201ENST00000373548 OR6C65A6NJZ3 312 aa17.07■□□□□ 0.32
HDAC1-201ENST00000373548 ZNF587BE7ETH6 402 aa17.07■□□□□ 0.32
HDAC1-201ENST00000373548 PYCARD-AS1I3L0S3 204 aa17.07■□□□□ 0.32
HDAC1-201ENST00000373548 MELTFP08582 738 aa17.07■□□□□ 0.32
HDAC1-201ENST00000373548 SULT1A3P0DMM9 295 aa17.07■□□□□ 0.32
HDAC1-201ENST00000373548 SULT1A4P0DMN0 295 aa17.07■□□□□ 0.32
HDAC1-201ENST00000373548 ANXA7P20073 488 aaKnown RBP17.07■□□□□ 0.32
HDAC1-201ENST00000373548 GSK3AP49840 483 aa17.07■□□□□ 0.32
HDAC1-201ENST00000373548 METTL11BQ5VVY1 283 aa17.07■□□□□ 0.32
HDAC1-201ENST00000373548 CHMP1BQ7LBR1 199 aa17.07■□□□□ 0.32
HDAC1-201ENST00000373548 RTN4RL2Q86UN3 420 aa17.07■□□□□ 0.32
HDAC1-201ENST00000373548 FJX1Q86VR8 437 aa17.07■□□□□ 0.32
HDAC1-201ENST00000373548 SEMA6DQ8NFY4 1073 aa17.07■□□□□ 0.32
HDAC1-201ENST00000373548 APH1AQ96BI3 265 aa17.07■□□□□ 0.32
HDAC1-201ENST00000373548 SEC22CQ9BRL7 303 aa17.07■□□□□ 0.32
HDAC1-201ENST00000373548 BANF2Q9H503 90 aa17.07■□□□□ 0.32
HDAC1-201ENST00000373548 ZFHX2Q9C0A1 2572 aaPredicted RBP17.06■□□□□ 0.32
HDAC1-201ENST00000373548 DHRS7CA6NNS2 312 aa17.06■□□□□ 0.32
HDAC1-201ENST00000373548 UBBP0CG47 229 aa17.06■□□□□ 0.32
HDAC1-201ENST00000373548 CPN1P15169 458 aa17.06■□□□□ 0.32
HDAC1-201ENST00000373548 TNK1Q13470 666 aa17.06■□□□□ 0.32
HDAC1-201ENST00000373548 GLDNQ6ZMI3 551 aaPredicted RBP17.06■□□□□ 0.32
HDAC1-201ENST00000373548 NUFIP2Q7Z417 695 aaKnown RBP17.06■□□□□ 0.32
HDAC1-201ENST00000373548 PNLDC1Q8NA58 520 aaKnown RBP17.06■□□□□ 0.32
HDAC1-201ENST00000373548 CPEB3Q8NE35 698 aaKnown RBP17.06■□□□□ 0.32
HDAC1-201ENST00000373548 OR5D18Q8NGL1 313 aa17.06■□□□□ 0.32
HDAC1-201ENST00000373548 GINS4Q9BRT9 223 aa17.06■□□□□ 0.32
HDAC1-201ENST00000373548 SELENOIQ9C0D9 397 aa17.06■□□□□ 0.32
HDAC1-201ENST00000373548 PLSCR3Q9NRY6 295 aa17.06■□□□□ 0.32
HDAC1-201ENST00000373548 ZNF222Q9UK12 451 aa17.06■□□□□ 0.32
HDAC1-201ENST00000373548 SSNA1O43805 119 aa17.06■□□□□ 0.32
HDAC1-201ENST00000373548 RAB3DO95716 219 aa17.06■□□□□ 0.32
HDAC1-201ENST00000373548 CYB5AP00167 134 aa17.06■□□□□ 0.32
HDAC1-201ENST00000373548 CHRM2P08172 466 aa17.06■□□□□ 0.32
HDAC1-201ENST00000373548 GNB3P16520 340 aa17.06■□□□□ 0.32
HDAC1-201ENST00000373548 ERP29P30040 261 aaKnown RBP17.06■□□□□ 0.32
HDAC1-201ENST00000373548 RCVRNP35243 200 aa17.06■□□□□ 0.32
HDAC1-201ENST00000373548 PTGFRP43088 359 aa17.06■□□□□ 0.32
HDAC1-201ENST00000373548 FAPQ12884 760 aa17.06■□□□□ 0.32
HDAC1-201ENST00000373548 C1QL2Q7Z5L3 287 aa17.06■□□□□ 0.32
HDAC1-201ENST00000373548 MCEMP1Q8IX19 187 aa17.06■□□□□ 0.32
HDAC1-201ENST00000373548 PIGTQ969N2 578 aa17.06■□□□□ 0.32
HDAC1-201ENST00000373548 TRAF4Q9BUZ4 470 aaPredicted RBP17.06■□□□□ 0.32
HDAC1-201ENST00000373548 TMEM59Q9BXS4 323 aa17.06■□□□□ 0.32
HDAC1-201ENST00000373548 B3GNT2Q9NY97 397 aa17.06■□□□□ 0.32
HDAC1-201ENST00000373548 ZNF107Q9UII5 783 aaPredicted RBP17.06■□□□□ 0.32
HDAC1-201ENST00000373548 A0A096LPE4 126 aa17.05■□□□□ 0.32
HDAC1-201ENST00000373548 A0A1W2PPZ6 126 aa17.05■□□□□ 0.32
HDAC1-201ENST00000373548 TM4SF5O14894 197 aa17.05■□□□□ 0.32
HDAC1-201ENST00000373548 NAT2P11245 290 aa17.05■□□□□ 0.32
HDAC1-201ENST00000373548 FCGR2AP12318 317 aa17.05■□□□□ 0.32
HDAC1-201ENST00000373548 CEACAM1P13688 526 aa17.05■□□□□ 0.32
HDAC1-201ENST00000373548 ALDH3B1P43353 468 aa17.05■□□□□ 0.32
HDAC1-201ENST00000373548 NOVA1P51513 510 aaKnown RBP17.05■□□□□ 0.32
HDAC1-201ENST00000373548 PRSS12P56730 875 aa17.05■□□□□ 0.32
HDAC1-201ENST00000373548 SLC22A6Q4U2R8 563 aa17.05■□□□□ 0.32
HDAC1-201ENST00000373548 IGFL2Q6UWQ7 119 aa17.05■□□□□ 0.32
HDAC1-201ENST00000373548 TRAPPC6BQ86SZ2 158 aa17.05■□□□□ 0.32
HDAC1-201ENST00000373548 NUDCD2Q8WVJ2 157 aa17.05■□□□□ 0.32
HDAC1-201ENST00000373548 LRFN3Q9BTN0 628 aa17.05■□□□□ 0.32
HDAC1-201ENST00000373548 TINAGL1Q9GZM7 467 aaPredicted RBP17.05■□□□□ 0.32
HDAC1-201ENST00000373548 GPR173Q9NS66 373 aa17.05■□□□□ 0.32
HDAC1-201ENST00000373548 UPB1Q9UBR1 384 aa17.05■□□□□ 0.32
HDAC1-201ENST00000373548 M0QYG6 137 aa17.05■□□□□ 0.32
HDAC1-201ENST00000373548 FABP7O15540 132 aa17.05■□□□□ 0.32
HDAC1-201ENST00000373548 ATP6V1G1O75348 118 aa17.05■□□□□ 0.32
HDAC1-201ENST00000373548 CRTAPO75718 401 aaPredicted RBP17.05■□□□□ 0.32
HDAC1-201ENST00000373548 CD74P04233 296 aa17.05■□□□□ 0.32
HDAC1-201ENST00000373548 ANXA3P12429 323 aa17.05■□□□□ 0.32
HDAC1-201ENST00000373548 CDK10Q15131 360 aa17.05■□□□□ 0.32
HDAC1-201ENST00000373548 SF3B4Q15427 424 aaKnown RBP eCLIP17.05■□□□□ 0.326e-7■■■■■ 37.8
HDAC1-201ENST00000373548 ZNF584Q8IVC4 421 aa17.05■□□□□ 0.32
HDAC1-201ENST00000373548 MED30Q96HR3 178 aa17.05■□□□□ 0.32
HDAC1-201ENST00000373548 NPDC1Q9NQX5 325 aaPredicted RBP17.05■□□□□ 0.32
HDAC1-201ENST00000373548 ZNF736B4DX44 427 aaPredicted RBP17.04■□□□□ 0.32
HDAC1-201ENST00000373548 SOCS1O15524 211 aa17.04■□□□□ 0.32
HDAC1-201ENST00000373548 IL5P05113 134 aa17.04■□□□□ 0.32
HDAC1-201ENST00000373548 VSIG10L2P0DP72 767 aa17.04■□□□□ 0.32
HDAC1-201ENST00000373548 ZP1P60852 638 aa17.04■□□□□ 0.32
HDAC1-201ENST00000373548 RIPPLY1Q0D2K3 151 aa17.04■□□□□ 0.32
HDAC1-201ENST00000373548 SEZ6L2Q6UXD5 910 aa17.04■□□□□ 0.32
HDAC1-201ENST00000373548 ZNF100Q8IYN0 542 aa17.04■□□□□ 0.32
HDAC1-201ENST00000373548 OR4S1Q8NGB4 309 aa17.04■□□□□ 0.32
HDAC1-201ENST00000373548 TNFAIP8L1Q8WVP5 186 aa17.04■□□□□ 0.32
HDAC1-201ENST00000373548 GHRLQ9UBU3 117 aa17.04■□□□□ 0.32
HDAC1-201ENST00000373548 MEIKINA0A087WXM9 373 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms