RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 SNAI3Q3KNW1 292 aa9.52□□□□□ -0.88
TRERF1-203ENST00000372917 GGTA1PQ4G0N0 100 aa9.52□□□□□ -0.88
TRERF1-203ENST00000372917 MED25Q71SY5 747 aa9.52□□□□□ -0.88
TRERF1-203ENST00000372917 TMEM150AQ86TG1 271 aa9.52□□□□□ -0.88
TRERF1-203ENST00000372917 NPAS4Q8IUM7 802 aa9.52□□□□□ -0.88
TRERF1-203ENST00000372917 MORN4Q8NDC4 146 aa9.52□□□□□ -0.88
TRERF1-203ENST00000372917 LKAAEAR1Q8TD35 194 aa9.52□□□□□ -0.88
TRERF1-203ENST00000372917 SMIM19Q96E16 107 aa9.52□□□□□ -0.88
TRERF1-203ENST00000372917 PTPN18Q99952 460 aa9.52□□□□□ -0.88
TRERF1-203ENST00000372917 NUDT9Q9BW91 350 aa9.52□□□□□ -0.88
TRERF1-203ENST00000372917 RBKSQ9H477 322 aa9.52□□□□□ -0.88
TRERF1-203ENST00000372917 ANKRD10Q9NXR5 420 aa9.52□□□□□ -0.88
TRERF1-203ENST00000372917 AHSPQ9NZD4 102 aa9.52□□□□□ -0.88
TRERF1-203ENST00000372917 FUT9Q9Y231 359 aa9.52□□□□□ -0.88
TRERF1-203ENST00000372917 E5RGE8 158 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 PIN1P1O15428 100 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 LEFTY1O75610 366 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 ACRP10323 421 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 LMO1P25800 156 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 SLC25A1P53007 311 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 MESP2Q0VG99 397 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 ELOCQ15369 112 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 TMEM241Q24JQ0 296 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 HIKESHIQ53FT3 197 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 OR4A47Q6IF82 309 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 RFLNBQ8N5W9 214 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 ADAD2Q8NCV1 583 aaKnown RBP9.52□□□□□ -0.89
TRERF1-203ENST00000372917 OR4D5Q8NGN0 318 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 OR2V1Q8NHB1 315 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 ANKRD9Q96BM1 317 aaPredicted RBP9.52□□□□□ -0.89
TRERF1-203ENST00000372917 MOB3AQ96BX8 217 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 ZCCHC3Q9NUD5 404 aaKnown RBP9.52□□□□□ -0.89
TRERF1-203ENST00000372917 SERGEFQ9UGK8 458 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 NYNRINQ9P2P1 1898 aaKnown RBP9.52□□□□□ -0.89
TRERF1-203ENST00000372917 TNFSF12O43508 249 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 FGF17O60258 216 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 WNT11O96014 354 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 STATHP02808 62 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 CYC1P08574 325 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 SIRPAP78324 504 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 ZNF85Q03923 595 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 CDK5R1Q15078 307 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 NXPE1Q8N323 547 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 ZCCHC14Q8WYQ9 949 aaKnown RBP9.52□□□□□ -0.89
TRERF1-203ENST00000372917 AQP10Q96PS8 301 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 SCRT1Q9BWW7 348 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 IL26Q9NPH9 171 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 CXXC1Q9P0U4 656 aaPredicted RBP9.52□□□□□ -0.89
TRERF1-203ENST00000372917 MSRAQ9UJ68 235 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 OSGIN2Q9Y236 505 aa9.52□□□□□ -0.89
TRERF1-203ENST00000372917 A0A1W2PS29 197 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 RBFOX3A6NFN3 312 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 RNF212BA8MTL3 300 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 SLCO2B1O94956 709 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 SCGB1D2O95969 90 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 CX3CR1P49238 355 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 ERVS71-1P61550 626 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 OR51L1Q8NGJ5 315 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 APOBEC4Q8WW27 367 aaKnown RBP9.51□□□□□ -0.89
TRERF1-203ENST00000372917 FAM71F1Q96KD3 344 aaPredicted RBP9.51□□□□□ -0.89
TRERF1-203ENST00000372917 PRRT1Q99946 306 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 ALG12Q9BV10 488 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 TMEM9BQ9NQ34 198 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 ZNF319Q9P2F9 582 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 ST6GALNAC2Q9UJ37 374 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 LIPGQ9Y5X9 500 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 URB1O60287 2271 aaKnown RBP9.51□□□□□ -0.89
TRERF1-203ENST00000372917 TRAV30A0A087WSZ9 112 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 C4orf47A7E2U8 309 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 HSD17B6O14756 317 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 GPRIN2O60269 458 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 SLC16A8O95907 504 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 TOMM40O96008 361 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 NDUFV2P19404 249 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 TNFSF4P23510 183 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 RPL12P30050 165 aaKnown RBP9.51□□□□□ -0.89
TRERF1-203ENST00000372917 TAS2R50P59544 299 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 LCN10Q6JVE6 187 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 KLK6Q92876 244 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 TMEM186Q96B77 213 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 NMES1Q9C002 83 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 ZDHHC3Q9NYG2 299 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 CLN8Q9UBY8 286 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 ST3GAL6Q9Y274 331 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 DOCK8Q8NF50 2099 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 P2RX6O15547 441 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 PET100P0DJ07 73 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 ACRV1P26436 265 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 METAP1P53582 386 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 GNB2P62879 340 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 TMEM182Q6ZP80 229 aaPredicted RBP9.51□□□□□ -0.89
TRERF1-203ENST00000372917 Q6ZVL8 140 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 SLC25A42Q86VD7 318 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 H1FOOQ8IZA3 346 aaPredicted RBP9.51□□□□□ -0.89
TRERF1-203ENST00000372917 RSPO3Q9BXY4 272 aaPredicted RBP9.51□□□□□ -0.89
TRERF1-203ENST00000372917 BET1LQ9NYM9 111 aa9.51□□□□□ -0.89
TRERF1-203ENST00000372917 TRBV6-7A0A0A0MS04 114 aa9.5□□□□□ -0.89
TRERF1-203ENST00000372917 IGHV2OR16-5A0A0B4J2B6 119 aa9.5□□□□□ -0.89
TRERF1-203ENST00000372917 A0A1B0GU03 582 aa9.5□□□□□ -0.89
TRERF1-203ENST00000372917 SERPINA7P05543 415 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms