RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 RPL34P49207 117 aaKnown RBP10.39□□□□□ -0.75
VCL-202ENST00000372755 PRDX4Q13162 271 aa10.39□□□□□ -0.75
VCL-202ENST00000372755 GSG1Q2KHT4 349 aa10.39□□□□□ -0.75
VCL-202ENST00000372755 ARRDC1Q8N5I2 433 aa10.39□□□□□ -0.75
VCL-202ENST00000372755 ADPRHL1Q8NDY3 354 aa10.39□□□□□ -0.75
VCL-202ENST00000372755 EXTL1Q92935 676 aa10.39□□□□□ -0.75
VCL-202ENST00000372755 YIPF6Q96EC8 236 aa10.39□□□□□ -0.75
VCL-202ENST00000372755 ARRDC1-AS1Q9H2J1 176 aa10.39□□□□□ -0.75
VCL-202ENST00000372755 TMEM265A0A087WTH1 108 aa10.39□□□□□ -0.75
VCL-202ENST00000372755 A0A087WUJ7 227 aa10.39□□□□□ -0.75
VCL-202ENST00000372755 UBE2L5PA0A1B0GUS4 154 aa10.39□□□□□ -0.75
VCL-202ENST00000372755 OR2B8PP59922 312 aa10.39□□□□□ -0.75
VCL-202ENST00000372755 ERVFC1-1P60608 527 aa10.39□□□□□ -0.75
VCL-202ENST00000372755 Q56UQ5 140 aa10.39□□□□□ -0.75
VCL-202ENST00000372755 TMEM128Q5BJH2 165 aa10.39□□□□□ -0.75
VCL-202ENST00000372755 TRAT1Q6PIZ9 186 aa10.39□□□□□ -0.75
VCL-202ENST00000372755 COMMD1Q8N668 190 aa10.39□□□□□ -0.75
VCL-202ENST00000372755 DEFB123Q8N688 67 aa10.39□□□□□ -0.75
VCL-202ENST00000372755 TRMT61AQ96FX7 289 aaKnown RBP10.39□□□□□ -0.75
VCL-202ENST00000372755 HMX2A2RU54 273 aa10.39□□□□□ -0.75
VCL-202ENST00000372755 FZD6O60353 706 aa10.39□□□□□ -0.75
VCL-202ENST00000372755 CEACAM5P06731 702 aa10.39□□□□□ -0.75
VCL-202ENST00000372755 KCNJ3P48549 501 aa10.39□□□□□ -0.75
VCL-202ENST00000372755 GFERP55789 205 aa10.39□□□□□ -0.75
VCL-202ENST00000372755 PJVKQ0ZLH3 352 aa10.39□□□□□ -0.75
VCL-202ENST00000372755 C11orf42Q8N5U0 333 aa10.39□□□□□ -0.75
VCL-202ENST00000372755 OR4F17Q8NGA8 305 aa10.39□□□□□ -0.75
VCL-202ENST00000372755 ADAT1Q9BUB4 502 aaKnown RBP10.39□□□□□ -0.75
VCL-202ENST00000372755 SARGQ9BW04 601 aa10.39□□□□□ -0.75
VCL-202ENST00000372755 AUNIPQ9H7T9 357 aa10.39□□□□□ -0.75
VCL-202ENST00000372755 LOC102723971A0A1B0GUV8 181 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 SPRY3O43610 288 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 BMP5P22003 454 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 KRTDAPP60985 99 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 PPP1CBP62140 327 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 MRPL58Q14197 206 aaKnown RBP10.38□□□□□ -0.75
VCL-202ENST00000372755 OR2W3Q7Z3T1 314 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 UBE3DQ7Z6J8 389 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 OR11G2Q8NGC1 345 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 OR4C16Q8NGL9 310 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 AKR7LQ8NHP1 331 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 NOL4LQ96MY1 436 aaPredicted RBP10.38□□□□□ -0.75
VCL-202ENST00000372755 ONECUT1Q9UBC0 465 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 ZNF391Q9UJN7 358 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 CRYBG1Q9Y4K1 1723 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 DUS4LO95620 317 aaKnown RBP10.38□□□□□ -0.75
VCL-202ENST00000372755 HRASP01112 189 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 EPXP11678 715 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 FAHP16930 419 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 RPS27P42677 84 aaKnown RBP10.38□□□□□ -0.75
VCL-202ENST00000372755 ZNF425Q6IV72 752 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 KIRREL2Q6UWL6 708 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 SMIM4Q8WVI0 70 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 LSM2Q9Y333 95 aaKnown RBP10.38□□□□□ -0.75
VCL-202ENST00000372755 A0A0A6YYD5 115 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 SLC17A2O00624 439 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 RBP4P02753 201 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 CALCRP30988 508 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 RFC3P40938 356 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 MMP15P51511 669 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 OR1C1Q15619 314 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 ALKBH6Q3KRA9 238 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 RNF212Q495C1 297 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 OR2T2Q6IF00 324 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 PPP1R1CQ8WVI7 109 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 ST8SIA2Q92186 375 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 FBXO17Q96EF6 278 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 ISG20L2Q9H9L3 353 aaKnown RBP10.38□□□□□ -0.75
VCL-202ENST00000372755 TRGV5A0A0B4J1U4 118 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 TOX4O94842 621 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 IGLV3-25P01717 112 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 FPR2P25090 351 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 DCTDP32321 178 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 CCL7P80098 99 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 RNPS1Q15287 305 aaKnown RBP10.38□□□□□ -0.75
VCL-202ENST00000372755 PLA1AQ53H76 456 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 RELL2Q8NC24 303 aaPredicted RBP10.38□□□□□ -0.75
VCL-202ENST00000372755 TMEM147Q9BVK8 224 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 CHD2O14647 1828 aaKnown RBP10.38□□□□□ -0.75
VCL-202ENST00000372755 TRAV17A0A0B4J275 112 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 M0R1X1 148 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 GNG3P63215 75 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 PAX5Q02548 391 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 FUT7Q11130 342 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 AGERQ15109 404 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 ZNF528Q3MIS6 628 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 RSPO2Q6UXX9 243 aaPredicted RBP10.38□□□□□ -0.75
VCL-202ENST00000372755 PTOV1Q86YD1 416 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 NEIL1Q96FI4 390 aaPredicted RBP10.38□□□□□ -0.75
VCL-202ENST00000372755 SLC17A5Q9NRA2 495 aa10.38□□□□□ -0.75
VCL-202ENST00000372755 C4BP0C0L5 1744 aa10.37□□□□□ -0.75
VCL-202ENST00000372755 OR2M5A3KFT3 312 aa10.37□□□□□ -0.75
VCL-202ENST00000372755 HSBP1O75506 76 aa10.37□□□□□ -0.75
VCL-202ENST00000372755 SCGB1C2P0DMR2 95 aa10.37□□□□□ -0.75
VCL-202ENST00000372755 KIR2DS2P43631 304 aa10.37□□□□□ -0.75
VCL-202ENST00000372755 PCED1AQ9H1Q7 454 aa10.37□□□□□ -0.75
VCL-202ENST00000372755 WSB2Q9NYS7 404 aaPredicted RBP10.37□□□□□ -0.75
VCL-202ENST00000372755 CXorf51AA0A1B0GTR3 108 aa10.37□□□□□ -0.75
VCL-202ENST00000372755 FAM3AP98173 230 aa10.37□□□□□ -0.75
VCL-202ENST00000372755 OTOSQ8NHW6 89 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms